Sources: 12Gene Ontology See all sources |
Cellular components related to adenoma according to GeneDecks: (show all 12)
| id | Name | GO ID | Score | Top Affiliating Genes | | 1 | plasma membrane | GO:005886 | INF | NCAM1, RECK, CNR1, CNTFR, KIT, KITLG | | 2 | cytoplasm | GO:005737 | INF | PIM3, NCF2, PDCD4, REG3A, KIT, KITLG | | 3 | extracellular space | GO:005615 | INF | REG3A, REN, CNTF, KIT, KITLG, SFRP1 | | 4 | nucleus | GO:005634 | INF | ZNF331, ZNF410, ZNF131, ZNF138, ZNF708, ZNF432 | | 5 | nucleoplasm | GO:005654 | 21.9 | NCOA1, NCOR1, NCOR2, PCNA, GCK, RB1 | | 6 | membrane | GO:016020 | 19.1 | PDE4A, RECK, REN, PCSK2, VHL, VEGFA | | 7 | cell surface | GO:009986 | 17.5 | NCAM1, KISS1R, SFRP1, VEGFA, LPAR1, BMP2 | | 8 | perinuclear region of cytoplasm | GO:048471 | 16.2 | PDE4A, PCSK1, BSPRY, CLU, PARK2, BAG1 | | 9 | secretory granule | GO:030141 | 13.5 | PCSK2, PCSK1, GCK, GCG, VEGFA, RAB3B | | 10 | cytosol | GO:005829 | INF | PIK3CA, NCF2, PDCD4, PDE11A, PDE4A, CNTF | | 11 | extracellular region | GO:005576 | INF | NCAM1, REG1A, REG1B, REG4, RETN, KISS1 | | 12 | integral to plasma membrane | GO:005887 | INF | LRMP, RET, CNR1, VIPR1, LPAR1, BMPR2 |
Biological processes related to adenoma according to GeneDecks: (show top 50)
(show all 58)
| id | Name | GO ID | Score | Top Affiliating Genes | | 1 | negative regulation of transcription, DNA-dependent | GO:045892 | INF | KLF4, PDCD4, SFRP1, RB1, RBM15, BRCA1 | | 2 | positive regulation of transcription, DNA-dependent | GO:045893 | INF | KLF4, NCOA1, RET, SFRP1, RB1, BRCA1 | | 3 | negative regulation of transcription from RNA polymerase II promoter | GO:000122 | INF | KLF4, NCOR1, NCOR2, VHL, VDR, MYC | | 4 | signal transduction | GO:007165 | 26.4 | PDE11A, PDE4A, RET, CNTF, CNTFR, KIT | | 5 | negative regulation of apoptotic process | GO:043066 | 19.7 | PIM3, SFRP1, GCG, GCM2, BRAF, VEGFA | | 6 | blood coagulation | GO:007596 | 19.1 | PIK3CA, PDE11A, BSG, VEGFA, VEGFB, VEGFC | | 7 | apoptotic process | GO:006915 | 18.4 | PIM3, PDCD4, SGPL1, VIM, BRCA1, BOK | | 8 | response to drug | GO:042493 | 18.0 | NCF2, PDE4A, REN, SFRP1, PCSK1, SERPINA7 | | 9 | cell proliferation | GO:008283 | 17.3 | REG1B, REG3A, KITLG, PCNA, GCG, BOK | | 10 | cell-cell signaling | GO:007267 | 16.8 | PCSK1, BMP2, BMP3, CGA, CGB, CEACAM6 | | 11 | G-protein coupled receptor signaling pathway | GO:007186 | 16.3 | KISS1, KISS1R, GCG, VIP, VIPR1, LPAR1 | | 12 | platelet activation | GO:030168 | 15.8 | PIK3CA, VEGFA, VEGFB, VEGFC, RAP1A, RAPGEF3 | | 13 | energy reserve metabolic process | GO:006112 | 15.7 | PCSK1, GCG, MYC, RAP1A, RAPGEF3, RAP1B | | 14 | cell surface receptor signaling pathway | GO:007166 | 15.4 | BSG, LIFR, BIRC2, BIRC3, LEPR, BAG1 | | 15 | cell cycle arrest | GO:007050 | 14.9 | RB1, MYC, RASSF1, MSH2, ATM, CDK6 | | 16 | xenobiotic metabolic process | GO:006805 | 14.9 | NAT1, NAT2, UGT1A1, UGT1A6, MTR, FMO3 | | 17 | fibroblast growth factor receptor signaling pathway | GO:008543 | 14.7 | PIK3CA, BRAF, RAF1, UBA52, UBC, MTOR | | 18 | nerve growth factor receptor signaling pathway | GO:048011 | 14.6 | PIK3CA, BRAF, RAP1A, RAF1, RAC1, BCL2L11 | | 19 | female pregnancy | GO:007565 | 14.6 | CLDN4, BCL2, SCGB1A1, LEP, UCN, FSHB | | 20 | anti-apoptosis | GO:006916 | 14.6 | PIK3CA, BRAF, VHL, VEGFB, BIRC2, BIRC3 | | 21 | epidermal growth factor receptor signaling pathway | GO:007173 | 14.5 | PIK3CA, VIL1, RAF1, UBA52, UBC, MTOR | | 22 | transcription initiation from RNA polymerase II promoter | GO:006367 | 14.5 | NCOR1, NCOR2, VDR, MYC, RARA, RARB | | 23 | positive regulation of apoptotic process | GO:043065 | 14.4 | NCOA1, CNR1, SFRP1, LPAR1, BMP2, BMP4 | | 24 | response to hypoxia | GO:001666 | 14.4 | VEGFA, BMP2, RAF1, CLDN3, BCL2, SCAP | | 25 | positive regulation of cell migration | GO:030335 | 14.3 | RET, VIL1, VEGFA, BMP2, KDR, CGA | | 26 | aging | GO:007568 | 14.2 | NCF2, CNR1, SERPINA7, VDR, SCAP, BAK1 | | 27 | regulation of cell proliferation | GO:042127 | 14.1 | KIT, BRCA1, BMPR2, BID, BIRC2, BIRC7 | | 28 | positive regulation of peptidyl-tyrosine phosphorylation | GO:050731 | 13.9 | KITLG, VEGFA, VEGFB, LIF, MTOR, CD36 | | 29 | positive regulation of MAPK cascade | GO:043410 | 13.9 | CNTF, KIT, LPAR1, LIF, KDR, LEP | | 30 | male gonad development | GO:008584 | 13.6 | REN, KIT, KITLG, SFRP1, BOK, BCL2 | | 31 | platelet degranulation | GO:002576 | 13.6 | VEGFA, VEGFB, VEGFC, CLU, SCG3, CD36 | | 32 | response to organic cyclic compound | GO:014070 | 13.5 | NCF2, SFRP1, BMP4, UGT1A1, BAK1, MSH2 | | 33 | transforming growth factor beta receptor signaling pathway | GO:007179 | 13.5 | NCOR1, NCOR2, MYC, BMPR1A, PARP1, UBA52 | | 34 | response to estradiol stimulus | GO:032355 | 13.5 | NCOA1, VDR, BMP4, RARA, BID, UCN | | 35 | response to lipopolysaccharide | GO:032496 | 13.5 | NCF2, CNR1, SFTPC, PCSK1, UGT1A1, S100A8 | | 36 | positive regulation of ERK1 and ERK2 cascade | GO:070374 | 13.2 | GCG, BRAF, VEGFB, BMP2, BMP4, KDR | | 37 | response to ethanol | GO:045471 | 13.1 | CNR1, BGLAP, BCL2, BAK1, S100A8, CDK1 | | 38 | positive regulation of cell division | GO:051781 | 12.9 | VEGFA, VEGFB, VEGFC, FIGF, FGF1, FGF2 | | 39 | positive regulation of protein phosphorylation | GO:001934 | 12.5 | VEGFA, BMP2, BMP4, MT3, MTOR, AXIN1 | | 40 | inflammatory response | GO:006954 | 12.5 | KIT, BMP2, BMP6, RAC1, SCG2, UCN | | 41 | regulation of insulin secretion | GO:050796 | 12.0 | CNR1, PCSK1, GCK, GCG, RAP1A, RAPGEF3 | | 42 | response to glucocorticoid stimulus | GO:051384 | 11.9 | SFTPC, PCSK1, BGLAP, UCN, INSR, IL10 | | 43 | activation of MAPK activity | GO:000187 | 11.3 | KIT, LPAR1, UBA52, UBC, CD74, CDK1 | | 44 | response to mechanical stimulus | GO:009612 | 10.9 | BMP2, BMP4, BGLAP, JUN, MMP9, CCL2 | | 45 | positive regulation of cell proliferation | GO:008284 | INF | REG1A, CNTF, CNTFR, KIT, SFRP1, VIP | | 46 | angiogenesis | GO:001525 | INF | PIK3CA, SETD2, VEGFA, VEGFC, RAPGEF3, KDR | | 47 | negative regulation of cell proliferation | GO:008285 | INF | KLF4, KISS1R, SFRP1, VHL, VDR, BMP2 | | 48 | positive regulation of endothelial cell proliferation | GO:001938 | INF | VEGFA, VEGFB, BMP2, BMP4, BMP6, BMPR2 | | 49 | small molecule metabolic process | GO:044281 | INF | PIK3CA, NCOA1, NCOR1, NCOR2, SGPL1, PCSK1 | | 50 | positive regulation of transcription from RNA polymerase II promoter | GO:045944 | INF | KLF4, NCOA1, RB1, BRCA1, VEGFA, VDR |
Molecular functions related to adenoma according to GeneDecks: (show all 14)
| id | Name | GO ID | Score | Top Affiliating Genes | | 1 | heme binding | GO:020037 | INF | , , MPO, CBS, CAT, TPO | | 2 | sequence-specific DNA binding | GO:043565 | INF | GCM2, VDR, MYC, RARA, RARB, PBX1 | | 3 | protein homodimerization activity | GO:042803 | 19.8 | KIT, SFTPC, VIL1, VEGFA, VEGFB, BMP2 | | 4 | protein heterodimerization activity | GO:046982 | 16.3 | BRAF, VEGFA, VEGFB, BOK, MYC, BMP2 | | 5 | receptor binding | GO:005102 | 16.2 | REN, CNTFR, GCG, BMP2, BMP3, RARA | | 6 | transcription factor binding | GO:008134 | 16.0 | RB1, VHL, MYC, RARA, PBX1, PARP1 | | 7 | enzyme binding | GO:019899 | 16.0 | NCOA1, BRCA1, VHL, RARA, RAC1, BIRC5 | | 8 | identical protein binding | GO:042802 | 15.9 | VWA2, SFRP1, PCNA, VIL1, VIM, RAF1 | | 9 | hormone activity | GO:005179 | 15.6 | RETN, GCG, VIP, SCT, LEP, CHGB | | 10 | growth factor activity | GO:008083 | 15.2 | REG1A, CNTF, KITLG, VEGFA, VEGFB, VEGFC | | 11 | cytokine activity | GO:005125 | 11.7 | CNTF, KITLG, VEGFA, BMP2, BMP3, BMP4 | | 12 | electron carrier activity | GO:009055 | INF | NCF2, , , , FDX1, GPX2 | | 13 | protein binding | GO:005515 | INF | PIK3CA, PIM3, NCF2, NCOA1, NCOR1, NCOR2 | | 14 | transcription regulatory region DNA binding | GO:044212 | INF | KLF4, NCOR1, BRCA1, PAX8, PAX2, YY1 |
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