AAT
MCID: ALP007

Alpha 1-antitrypsin Deficiency malady

Summaries for Alpha 1-antitrypsin Deficiency

Sources:
6Disease Ontology, 30NIH Rare Diseases, 23MedlinePlus, 15GeneReviews, 44Wikipedia, 22MalaCards
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MedlinePlus: Alpha-1 antitrypsin deficiency is an inherited disorder that can cause lung disease in adults and liver disease in adults and children. alpha-1 antitrypsin (aat) is a protein that protects the lungs. the liver usually makes the protein, and releases it into the bloodstream. because of a gene problem, some people have little or none of it. not having enough aat puts you at risk of emphysema or liver problems. if you smoke, you increase your risk. children with aat deficiency can develop liver problems that last their whole lives. aat deficiency can be treated but not cured. one treatment involves adding to or replacing the missing protein. a lung transplant may be an option if you are seriously ill. staying away from cigarette smoke is crucial. a blood test can tell if you have the deficiency. if you have it, your family members should also take the blood test.23

MalaCards: Alpha 1-antitrypsin Deficiency, also known as inherited emphysema, is related to hepatitis and panniculitis. An important gene associated with Alpha 1-antitrypsin Deficiency is SERPINA1 (serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1), and among its related pathways are Bacterial infections in CF airways and Immune response Oncostatin M signaling via JAK-Stat in human cells. The drugs epinephrine hydrochloride and calcium gluconate and the compounds aprotinin and endotoxin have been mentioned in the context of this disorder. Affiliated tissues include whole blood, heart and colon, and related mouse phenotypes are hematopoietic system and respiratory system.

Disease Ontology: A plasma protein metabolism disease that has material basis in defective production of the protease inhibitor alpha 1-antitrypsin (a1at), leading to decreased a1at activity in the blood and lungs, and deposition of excessive abnormal a1at protein in liver cells.6

NIH Rare Diseases: Alpha 1-antitrypsin deficiency is an inherited disorder that can cause lung disease in adults and liver disease in adults and children. Alpha-1 antitrypsin (AAT) is a protein that protects the lungs. The liver usually makes the protein, and releases it into the bloodstream. Because of a mutation in the SERPINA1 gene, some people have little or no AAT. Not having enough AAT may lead to emphysema or liver problems. Smoking increases the risk. A deficiency of AAT can be treated but not cured. One treatment involves adding to or replacing the missing protein. More severe cases may require a lung transplant. This condition is caused by mutations in the SERPINA1 gene and inherited in an autosomal co-dominant fashion.30

Genetics Home Reference: Alpha-1 antitrypsin deficiency is an inherited disorder that may cause lung disease and liver disease. The signs and symptoms of the condition and the age at which they appear vary among individuals.17

Wikipedia: Alpha 1-antitrypsin deficiency (α1-antitrypsin deficiency, A1AD) is a genetic disorder that causes...44 more...

GeneReviews summary for alpha1-a

Aliases & Descriptions for Alpha 1-antitrypsin Deficiency

Sources:
6Disease Ontology, 44Wikipedia, 15GeneReviews, 30NIH Rare Diseases, 16GeneTests, 17Genetics Home Reference, 8DISEASES, 32Novoseek , 23MedlinePlus, 43UMLS, 40SNOMED-CT, 27NCIt, 33OMIM, 24MeSH, 19ICD9CM
See all sources

Aliases & Descriptions:

alpha 1-antitrypsin deficiency 6 44 30 8 32 43
inherited emphysema 44 17 43
a1at deficiency 15 30 16
aatd 15 30 16
alpha 1 antitrypsin deficiency 30 16
alpha-1 antitrypsin deficiency 17 23
hereditary pulmonary emphysema 44 17
alpha1-antitrypsin deficiency 15 16
genetic emphysema 44 17
aat deficiency 6 30
aat 44 17
pathological accumulation of air in tissues 43
emphysema, hereditary pulmonary 43
alpha-1-antitrypsin deficiency 15
alpha-1 proteinase inhibitor 44
alpha-1 related emphysema 44
cardiac arrest 43
emphysema 17

External Ids:

ICD9CM19 273.4

Related Diseases for Alpha 1-antitrypsin Deficiency

Sources:
13GeneCards, 14GeneDecks
See all sources

Diseases related to alpha 1-antitrypsin deficiency by text searches and GeneDecks gene sharing:

(show top 50)    (show all 816)
idRelated DiseaseScoreTop Affiliating Genes
1hepatitis31.1SERPINA1, SEPSECS, F2, GLUD1, HLA-DRB1, HFE
2panniculitis30.4SERPINA1, IGHE, IFNG, TNF
3alpha-1-antichymotrypsin deficiency30.3SERPINC1, SERPINA1, SERPINA3
4aneurysm disease30.0SERPINA1, MMP1, NOS3, ELN
5cystic fibrosis lung disease30.0CFTR, MPO, IL8, ELANE
6cluster headache29.8SERPINA1, NOS1, NOS3, HFE
7pulmonary emphysema29.7SERPINA1, SERPINB1, VEGFA, MMP1, MMP12, IL8
8cutis laxa29.7BMP6, ELANE, ELN, TGFB1
9chronic obstructive pulmonary disease29.6SFTPB, GC, SERPINA1, SERPINA3, SERPINB1, CFTR
10hemochromatosis29.3SERPINA1, BMP6, CFTR, MPO, GSTP1, CCL2
11bronchitis29.2SERPINA1, SERPINB1, CFTR, MPO, IL8, IGHE
12thromboembolism29.2SERPINC1, SERPINE1, SERPINA3, F2, NOS3, G6PD
13pulmonary hypertension29.0SFTPB, NOS3, ELANE, ELN
14asthma29.0SERPINE1, MPO, CD14, CCL2, IGES, IFNG
15keratoconus28.8MMP1, MMP3, RPS27A, TGFB1, SLPI
16wilson disease28.7SERPINA1, MMP1, F2, TNF, OTC, ELN
17scoliosis28.7SERPINC1, SERPINA1, MMP3, NOS1, ELN, TGFB1
18colorectal cancer28.6GSTP1, TNF, HFE, TGFB1
19obstructive lung disease28.6SERPINA1, SERPINA3, IGHE, TNF, ELANE, TGFB1
20tuberculosis28.5IL10, CCL2, IFNG, TNF
21periodontal disease28.2CD14, MMP1, MMP3, IL8, TNF, CRP
22fibromyalgia28.0SERPINA1, SERPINE1, IL10, IL8, TNF, NOS3
23anoxia27.8SERPINA6, MMP1, IL8, TNF, NOS1, ELANE
24pulmonary function27.8SFTPB, SERPINA1, CFTR, MPO, CD14, IL10
25idiopathic pulmonary fibrosis27.7MPO, MMP1, IL8, IFNG, TNF, TGFB1
26respiratory failure27.5SFTPB, CFTR, IGES, IGHE, ELANE, G6PD
27abdominal aortic aneurysm27.4MMP1, MMP12, MMP3, CCL2, ELANE, ELN
28periodontitis27.3MPO, CD14, MMP1, MMP3, IL10, IL8
29bronchiectasis27.3SERPINA1, SERPINA3, SERPINB1, BPI, CFTR, MPO
30headache27.2SERPINA1, CCL2, IFNG, TNF, NOS1, NOS3
31emphysema27.1SFTPB, SERPINE2, SERPINA2, SERPINA1, SERPINE1, SERPINA3
32myopathy27.1IL8, CCL2, IFNG, HLA-DRB1, TNF, OTC
33interstitial lung disease27.0SFTPB, BMP6, IL8, CCL2, TGFB1
34liver cirrhosis26.9SERPINC1, SERPINI1, SERPINA1, SEPSECS, SERPINA3, BPI
35primary pulmonary hypertension26.7SERPINE1, BMP6, CCL2, F2, ELANE, TGFB1
36hemolytic-uremic syndrome26.4SERPINC1, SERPINE1, SERPINB1, IL10, IL8, F2
37jaundice26.0CD14, IL10, IL8, CCL2, F2, GLUD1
38thalassemia25.7SERPINC1, IFNG, F2, HLA-DRB1, TNF, G6PD
39cytomegalovirus infection25.7SERPINA1, BMP6, MPO, IL10, IL8, CCL2
40pulmonary edema25.3SERPINC1, VEGFA, CFTR, IL8, IGHE, F2
41ulcerative colitis25.0SERPINA1, BPI, CFTR, MPO, CD14, MMP1
42monocytic leukemia24.4PIM1, VEGFA, BMP6, MPO, CD14, IL8
43copd24.1SFTPB, GC, SERPINE2, SERPINA1, SERPINE1, SERPINA3
44aortic aneurysm24.0SERPINC1, SERPINE1, VEGFA, BMP6, MPO, MMP1
45bronchial asthma23.7VEGFA, CFTR, MPO, CD14, GSTP1, IL10
46ischemic heart disease23.7SERPINC1, SERPINA1, SERPINE1, VEGFA, MPO, CD14
47colon carcinoma23.4SERPINE1, VEGFA, BMP6, CFTR, CD14, MMP1
48pulmonary disease23.3PIM1, SFTPB, GC, SERPINE2, SERPINC1, SERPINI1
49nephropathy23.2SERPINA1, SERPINE1, VEGFA, BMP6, MPO, CD14
50sarcoidosis23.1SERPINA3, VEGFA, CFTR, CD14, MMP1, MMP12

Graphical network of the top 20 diseases related to alpha 1-antitrypsin deficiency:



Graphical network of diseases related to alpha 1-antitrypsin deficiency

Clinical Features for Alpha 1-antitrypsin Deficiency

Drugs & Therapeutics for Alpha 1-antitrypsin Deficiency

Sources:
4CenterWatch, 29NIH Clinical Center, 5ClinicalTrials, 43UMLS, 28NDF-RT
See all sources

Approved drugs:

Search CenterWatch for alpha 1-antitrypsin deficiency

Drug clinical trials:

Search ClinicalTrials for alpha 1-antitrypsin deficiency

Search NIH Clinical Center for alpha 1-antitrypsin deficiency

Search CenterWatch for alpha 1-antitrypsin deficiency

Inferred drug relations via UMLS/NDF-RT:

43 28 alpha-1-proteinase inhibitor,human, atropine, atropine methylnitrate, atropine sulfate, calcium chloride, calcium gluceptate, calcium gluconate, calcium gluconate pwdr [va product], epinephrine, epinephrine bitartrate, epinephrine hydrochloride, epinephrine,racemic hydrochloride, epinephryl borate, sodium bicarbonate, sodium bicarbonate pwdr [va product]

Genetic Tests for Alpha 1-antitrypsin Deficiency

Sources:
16GeneTests
See all sources

Genetic tests related to alpha 1-antitrypsin deficiency:

id Genetic test Affiliating Genes
1 Alpha 1-antitrypsin Deficiency
clinical/research
SERPINA1

Anatomical Context for Alpha 1-antitrypsin Deficiency

Sources:
21LifeMap Discovery™, 22MalaCards
See all sources

MalaCards organs/tissues related to alpha 1-antitrypsin deficiency:

22
Whole blood, Heart, Colon, Liver, Lung, Skin, Monocytes, B cells, Endothelial, Bronchial epithelium

LifeMap Discovery
The database of embryonic development, stem cell research and regenerative medicine

Embryonic and adult cells/anatomical compartments related to alpha 1-antitrypsin deficiency:
id Organ / Tissue -> Anatomical Compartment -> Cell Relevance
1 Liver -> Liver Lobule -> Hepatocytes Potential therapeutic candidate, affected by disease

Phenotypes for genes affiliated with Alpha 1-antitrypsin Deficiency

Sources:
25MGI
See all sources

MGI Mouse Phenotypes related to alpha 1-antitrypsin deficiency:

25 (show all 11)
idDescriptionMGI Source AccessionScoreTop Affiliating Genes
1hematopoietic system phenotypeMP:000539710.1OTC, IGHE, SERPINB1, PIM1
2respiratory system phenotypeMP:00053889.8ELN, NOS1, CD14, CFTR, SERPINB1
3liver/biliary system phenotypeMP:00053708.9NOS3, OTC, IFNG, CFTR, VEGFA, SERPINA6
4growth/size phenotypeMP:00053788.5GLUD1, OTC, NOS3, HFE, HSPA5, GSTP1
5immune system phenotypeMP:00053878.3TNF, OTC, NOS1, ELANE, HFE, PRTN3
6behavior/neurological phenotypeMP:00053867.5IFNG, OTC, NOS1, NOS3, HFE, CCL2
7tumorigenesisMP:00020067.2AFP, EPHX1, TGFB1, ELANE, TNF, HSPA5
8reproductive system phenotypeMP:00053897.1AFP, TGFB1, OTC, TNF, HSPA5, IFNG
9mortality/agingMP:00107687.0HSPA5, OTC, NOS1, NOS3, ELANE, G6PD
10cardiovascular system phenotypeMP:00053855.1TNF, CRP, NOS1, NOS3, ELN, G6PD
11homeostasis/metabolism phenotypeMP:00053763.1AFP, HSPA5, GLUD1, TNF, OTC, CRP

Publications for genes affiliated with Alpha 1-antitrypsin Deficiency

Sources:
35PubMed
See all sources

Articles related to alpha 1-antitrypsin deficiency:

(show top 50)    (show all 199)
idTitleAuthorsYearAffiliating Genes
1Alpha1-antitrypsin deficiency carriers, serum alpha 1 -antitrypsin concentration, and non-small cell lung cancer survival. (21173712)Li Y.... Yang P.2011SERPINA1
2Cluster headache and Alpha 1-antitrypsin deficiency. (19515129)Summ O.... Evers S.2010SERPINA1
3Heterozygous alpha-1-antitrypsin deficiency (PiMZ): risk factor in the development of primary liver carcinoma in non-cirrhotic live r?]. (20886426)Manekeller S.... Hirner A.2010SERPINA1
4Alpha1-antitrypsin deficiency: forgotten etiology. (20090075)Kaplan A.... Cosentino L.2010SERPINA1
5Alpha-1-antitrypsin deficiency in the Cape Verde isla nds (Northwest Africa): High prevalence in a sub-Saharan population. (20226649)SpA-nola C.... SpA-nola H.2010SERPINA1
6Screening for Alpha 1 antitrypsin deficiency in Tunisian subjects with obstructive lung disease: a feasibility report. (19368725)Denden S.... Luisetti M.2009SERPINA1
7Alpha1-antitrypsin deficiency carriers, tobacco smoke, chronic obstructive pulmonary disease, and lung cancer risk. (18504338)Yang P.... de Andrade M.2008SERPINA1
8Alpha-1 antitrypsin deficiency: a conformational disease associated with lung and liver manifestations. (18193338)Greene C.M.... McElvaney N.G.2008SERPINA1
9Intravenous human plasma-derived augmentation therapy in alpha 1-antitrypsin deficiency: from pharmacokinetic analysis to individual izing therapy. (18413692)Zamora N.P.... Ronsano J.B.2008SERPINA1
10Screening for alpha1-antitrypsin deficiency in Lithuanian patients with COPD. (18722101)Sitkauskiene B.... Sakalauskas R.2008SERPINE1, SERPINA1
11The TNFalpha gene relates to clinical phenotype in alpha-1-antitrypsin deficiency. (18620570)Wood A.M.... Stockley R.A.2008TNF
12Liver disease associated with ZZ alpha1-antitrypsin deficiency and ursodeoxycholic acid therapy in children. (18955864)Lykavieris P.... Jacquemin E.2008SERPINA1
13Phenotypic differences in alpha 1 antitrypsin-deficient sibling pairs may relate to genetic variation. (19353349)Wood A.M.... Stockley R.A.2008GC, BMP6, SFTPB
14Alpha-1-antitrypsin deficiency: current concepts. (17562108)Mulgrew A.T.... McElvaney N.G.2007SERPINA1
15Prevalence and impact of bronchiectasis in alpha1-antitrypsin deficiency. (17872489)Parr D.G.... Stockley R.A.2007SERPINA1
16Plasma levels of alpha1-antichymotrypsin and secretory leukocyte proteinase inhibitor in healthy and chronic obstructive pulmonary disease (COPD) subjects with and without severe alpha1-antitrypsin deficiency. (17261175)Hollander C.... Janciauskiene S.M.2007SERPINA1
17PI S and PI Z alpha-1 antitrypsin deficiency worldwide. A review of existing genetic epidemiological data. (18309698)de Serres F.J.... Fernandez-Bustillo E.2007SERPINA1
18Alpha-1 antitrypsin deficiency among Indian children with liver disorders. (16974034)Khanna R.... Malik A.2006SERPINA1
19Relationship between alpha-1 antitrypsin deficient genotypes S and Z and lung cancer in Jordanian lung cancer patients. (16501672)El-Akawi Z.J.... Zoughool F.E.2006SERPINA1, CDIPT
20Effect of expectoration on inflammation in induced sputum in alpha-1-antitrypsin deficiency. (16257194)Gompertz S.... Stockley R.A.2006MPO, IL8, ELANE
21Alpha-1-antitrypsin deficiency: optimal therapeutic regimen based on population pharmacokinetics. (16928711)Soy D.... Miravitlles M.2006SERPINA1
22Estimating the risk for alpha-1 antitrypsin deficiency among COPD patients: evidence supporting targeted screening. (17240615)de Serres F.J.... Fernandez-Bustillo E.2006SERPINA1
23Alpha-1-antitrypsin deficiency: a new paradigm for hepatocellular carcinoma in genetic liver disease. (16044402)Rudnick D.A.... Perlmutter D.H.2005SERPINA1
24Alpha-1 antitrypsin deficiency in Italy: regional differences of the PIS and PIZ deficiency alleles. (16312203)de Serres F.J.... Fernandez-Bustillo E.2005SERPINA1, CDIPT
25Polymerisation underlies alpha1-antitrypsin deficiency, dementia and other serpinopathies. (15353322)Lomas D.A.... Miranda E.2004SERPINC1, SERPINI1
26Augmentation therapy for alpha(1)-antitrypsin deficiency. (15301559)Juvelekian G.S.... Stoller J.K.2004SERPINA1
27alpha1-Antitrypsin deficiency . 6: new and emerging treatments for alpha1-antitrypsin deficiency. (15454659)Sandhaus R.A.2004SERPINA1
28Genetic epidemiology of alpha-1 antitrypsin deficiency in southern Europe: France, Italy, Portugal and Spain. (12786756)de Serres F.J.... Fernandez-Bustillo E.2003SERPINA1
29Secretory leukocyte proteinase inhibitor, alpha-1-antitrypsin deficiency and emphysema: Preliminary study, speculation and an hypothesis. (12753532)Ayad M.S.... Brenton S.2003SERPINA1
30Analysis of the two common alpha-1-antitrypsin deficiency alleles PiMS and PiMZ as modifiers of Pseudomonas aeruginosa susceptibility in cystic fibrosis. (12372062)Meyer P.... Roscher A.A.2002SERPINA1
31Alpha-1-antitrypsin deficiency. Role in skin disorders (12669363)Bazex J.... Albes B.2002SERPINA1
32Hypersensitive mousetraps, alpha1-antitrypsin deficiency and dementia. (12023831)Lomas D.A.... Belorgey D.2002SERPINA1, C1S, SERPINC1
33Alpha-1 antitrypsin deficiency in emphysema. (12164415)Khan H.... Ahmed S.2002SERPINB1
34Molecular diagnosis of intermediate and severe alpha(1)-antitrypsin deficiency: MZ individuals with chronic obstructive pulmonary disease may have lower lung function than MM individuals. (11148177)Dahl M.... Tybjaerg-Hansen A.2001SERPINA1
35Therapy for alpha(1)-Antitrypsin Deficiency: Pharmacology and Clinical Recommendations. (18034520)Minai O.A.... Stoller J.K.2000SERPINA1
36Short-term supplementation therapy does not affect elastin degradation in severe alpha(1)-antitrypsin deficiency. The American-Italian AATD Study Group. (11112116)Gottlieb D.J.... Snider G.L.2000SERPINA1, ELN
37Transfection of nasal mucosa with a normal alpha1-antitrypsin gene in alpha1-antitrypsin-deficient subjects: comparison with protein therapy. (10811231)Brigham K.L.... Canonico A.E.2000SERPINA1
38Massive pulmonary hemorrhage due to cytomegalovirus infection in a Japanese patient with alpha-1-antitrypsin-deficient emphysema. (10461090)Tsushima K.... Kubo K.1999SERPINA1
39A national program for detection of alpha 1-antitrypsin deficiency in Italy. Gruppo I.D.A. (10464873)Luisetti M.... Balbi B.1999SERPINA1
40Identification and molecular charaterization of the new alpha-1- antitrypsin deficient allele PI YBarcelona (Asp256Val and Pro391His). (10651487)Jardi R.... Weidinger S.1998SERPINA1
41Alpha-1-antitrypsin deficiency associated with hepatic cirrhosis and IgA nephritis. (9346392)Os I.... Berge E.1997SERPINA1
42Alpha-1-antitrypsin deficiency in aneurysmal disease. (8666418)St Jean P.... Ferrell R.1996SERPINA1
43alpha 1-antitrypsin deficiency and idiopathic pulmonary fibrosis in a family. (8865799)Kim H.... Phillips Y.1996SERPINA1
44Lung disease due to alpha 1-antitrypsin deficiency. (9363132)Wiedemann H.P.... Stoller J.K.1996SERPINA2
45Sweet's syndrome leading to acquired cutis laxa (Marshall's syndrome) in an infant with alpha 1-antitrypsin deficiency. (7574835)Hwang S.T.... Frieden I.J.1995ELANE
46Molecular pathology of alpha 1-antitrypsin deficiency and its significance to clinical medicine. (7820538)Kalsheker N.A.1994SERPINA1
47Neutrophil accumulation in the lung in alpha 1-antitrypsin deficiency. Spontaneous release of leukotriene B4 by alveolar macrophages. (1653278)Hubbard R.C.... Crystal R.G.1991ELANE
48Augmentation therapy of alpha 1-antitrypsin deficiency. (2340051)Hubbard R.C.... Crystal R.G.1990SERPINB1
49Strategies for aerosol therapy of alpha 1-antitrypsin deficiency by the aerosol route. (2117165)Hubbard R.C.... Crystal R.G.1990SERPINA1, SERPINB1
50Decline in pulmonary function in patients with alpha 1-antitrypsin deficiency. (2117166)Evald T.... Kok-Jensen A.1990SERPINA1

Expression for genes affiliated with Alpha 1-antitrypsin Deficiency

Sources:
1BioGPS
See all sources
Expression patterns in normal tissues for genes affiliated with Alpha 1-antitrypsin Deficiency

Pathways for genes affiliated with Alpha 1-antitrypsin Deficiency

Sources:
41Thomson Reuters, 10EMD Millipore, 37R&D Systems, 20KEGG, 36QIAGEN
See all sources

Pathways related to alpha 1-antitrypsin deficiency according to GeneDecks:

(show all 40)
idPathwayScoreTop Affiliating Genes
1Bacterial infections in CF airways4110.7CFTR
2Immune response Oncostatin M signaling via JAK-Stat in human cells1010.6CCL2
3Cell adhesion Cell-matrix glycoconjugates1010.5ELANE, MMP3
4Blood Coagulation Signaling Pathways3710.2A2M, F2, SERPINE1, SERPINC1
5Complement and coagulation cascades2010.1C1S, A2M, F2, SERPINE1, SERPINA1, SERPINC1
6Inhibition of Matrix Metalloproteinases3610.0A2M, MMP3, MMP12, MMP1
7Cell adhesion_Cell-matrix glycoconjugates4110.0ELN, ELANE, MMP3, MMP1
8Immune response_Bacterial infections in normal airways419.9CFTR, CD14, IFNG
9Mechanisms of CFTR activation by S-nitrosoglutathione (normal and CF)419.9NOS3, NOS1, HSPA5, CFTR
10NO-dependent CFTR activation (normal and CF)419.9NOS3, NOS1, CFTR
11Immune response_Oncostatin M signaling via JAK-Stat in human cells419.9CCL2, MMP1, VEGFA, SERPINA3
12Amoebiasis209.9TGFB1, IL8, CD14, SERPINB1
13Cell adhesion_ECM remodeling419.7IL8, MMP3, MMP12, MMP1, SERPINE1, SERPINE2
14Cell adhesion ECM remodeling109.7IL8, MMP3, MMP12, MMP1, SERPINE1, SERPINE2
15Arginine and proline metabolism209.6NOS3, NOS1, OTC, GLUD1
16LDL Oxidation in Atherogenesis369.6TNF, CCL2, MPO
17Endothelin-1 Signaling Pathway369.6NOS1, IL10, BMP6
18Immune response_MIF in innate immunity response419.5TNF, IFNG, IL8, CD14
19Immune response_MIF-mediated glucocorticoid regulation419.5TNF, IFNG, IL8, MMP1
20Immune response MIF-mediated glucocorticoid regulation109.5TNF, IFNG, IL8, MMP1
21Immune response MIF in innate immunity response109.5TNF, IFNG, IL8, CD14
22Cytokine production by Th17 cells in CF (Mouse model)419.4TGFB1, IL8, CD14, CFTR
23Metalloproteases in connective tissue degradation109.4MMP1, MMP12, MMP3, ELN
24IL-10 Pathway369.3TNF, IL10, CD14, PIM1
25Pertussis209.1C1S, TNF, IL8, IL10, CD14
26Allograft rejection209.0TNF, HLA-DRB1, IFNG, IL10
27THC Differentiation Pathway369.0TNF, HLA-DRB1, IFNG, IL10
28Systemic lupus erythematosus209.0IL10, IFNG, HLA-DRB1, TNF, C1S
29Cytokine Network368.9TNF, IFNG, IL8, IL10
30IL-2 Signaling and its Primary Biological Effects in Different Immune Cell Types378.8TGFB1, TNF, IL10
31MIF Mediated Glucocorticoid Regulation368.7TNF, CCL2, IL8, IL10, CD14, BMP6
32MIF Regulation of Innate Immune Cells368.7TNF, CCL2, IL8, IL10, CD14, BMP6
33Leishmaniasis208.5TGFB1, TNF, HLA-DRB1, IFNG, IL10
34IL-6 Pathway368.5TNF, CCL2, IL8, IL10, BMP6, PIM1
35STAT3 Pathway368.4CCL2, IL8, IL10, BMP6, PIM1, TNF
36Malaria208.3TGFB1, TNF, IFNG, CCL2, IL8, IL10
37Tuberculosis208.2TGFB1, TNF, HLA-DRB1, IFNG, IL10, CD14
38Chagas disease (American trypanosomiasis)208.1TGFB1, TNF, IFNG, CCL2, IL8, IL10
39Rheumatoid arthritis207.9VEGFA, TGFB1, TNF, HLA-DRB1, IFNG, CCL2
40Cytokine-cytokine receptor interaction207.6TGFB1, TNF, IFNG, CCL2, IL8, IL10

Compounds for genes affiliated with Alpha 1-antitrypsin Deficiency

Sources:
32Novoseek , 9DrugBank, 18HMDB, 42Tocris Bioscience, 34PharmGKB
See all sources

Compounds related to alpha 1-antitrypsin deficiency according to GeneDecks:

(show top 50)    (show all 306)
idCompoundScoreTop Affiliating Genes
1aprotinin32 9 9 11.7C1S, SERPINC1, IGHE, SLPI, ELANE, F2
2endotoxin32 9.7GLUD1, CRP, ELANE, SLPI, CD14, BPI
3pge232 9.5SLPI, NOS1, MMP3, MMP1, SFTPB, CFTR
4h2o232 9.5MPO, ELN, CFTR, NOS1, RPS27A, SERPINB1
5aspartate32 9.4GC, BMP6, CFTR, CD14, F2, GLUD1
6ascorbic acid32 18 10.2HFE, SLPI, G6PD, SFTPB, CFTR, GSTP1
7heparin32 9 18 9 12.1SERPINE2, SERPINA1, SERPINE1, SERPINA3, SERPINB1, BPI
8n acetylcysteine32 9.0SERPINC1, CFTR, MMP1, MMP12, MMP3, IGHE
9histamine32 18 10.0SLPI, ELN, NOS1, IGES, MPO, BMP6
10dmso32 9.0PRTN3, AFP, G6PD, ELN, MMP3, CFTR
11valine32 8.7SERPINA3, CFTR, MPO, GSTP1, HSPA5, GLUD1
12fluticasone propionate32 42 9 9 11.5IL8, SERPINA6, SLPI, ELANE, TNF, IFNG
13fibrinogen32 8.4A2M, SERPINE1, SERPINA1, SERPINC1, GC, ELN
14cysteine32 8.3CFTR, SLPI, RPS27A, NOS1, GLUD1, ELANE
15polysaccharide32 8.2CCL2, IGHE, HSPA5, RPS27A, ELN, TGFB1
16testosterone32 9 18 9 11.2ELN, ELANE, RPS27A, NOS1, IGHE, GSTP1
17polymyxin b32 8.0BPI, IL8, SERPINE1, TNF, IFNG, CCL2
18arginine32 8.0ELN, SFTPB, SERPINC1, SERPINA6, IGHE, HSPA5
19methacholine32 9 9 10.0CRP, MPO, CD14, IL8, IGES, IGHE
20superoxide32 18 8.8G6PD, PRTN3, SLPI, EPHX1, ELANE, NOS3
21aspirin32 34 18 9.8SERPINC1, SERPINE1, BMP6, CFTR, MMP1, GSTP1
22acetylcholine32 9 18 9 10.6NOS3, IGHE, IGES, SERPINE2, MPO, NOS1
23etanercept32 9 9 9.5CRP, C1S, MMP1, MMP12, MMP3, IL10
24pentoxifylline32 9 9 9.5ELANE, IL8, TNF, IL10, MMP1, CD14
25hydrocortisone32 9 9 9.5BMP6, MMP1, SLPI, IL8, IGHE, TNF
26tgf beta132 7.5IL10, SERPINE1, BMP6, MMP1, MMP3, CCL2
27sb 20358032 42 8.5HSPA5, TNF, IFNG, CRP, NOS1, MMP3
28butyrate32 7.4TNF, SLPI, RPS27A, OTC, TGFB1, AFP
29gm-csf32 7.3VEGFA, BMP6, CD14, IL10, IL8, CCL2
30nitric oxide32 9 18 9 10.3IL10, CCL2, MMP12, MPO, BMP6, SERPINA1
31glutamine32 7.1ELANE, RPS27A, CRP, OTC, G6PD, CCL2
32infliximab32 9 9 9.1TNF, PRTN3, MMP1, VEGFA, MMP3, IL10
33vitamin d32 7.0SLPI, AFP, GC, SERPINE1, BMP6, CFTR
34indomethacin32 9 9 8.9IFNG, CFTR, MPO, MMP3, IGHE, HSPA5
35genistein32 9 18 9 9.9SERPINE1, VEGFA, CFTR, MMP1, MMP12, MMP3
36prednisolone32 9 9 8.9IGHE, MPO, MMP3, MMP1, CD14, BMP6
37paraffin32 6.8TGFB1, ELN, RPS27A, CCL2, IL10, SERPINA1
38vegf32 6.5NOS3, NOS1, CRP, HSPA5, CCL2, GSTP1
39simvastatin32 34 42 9 18 9 11.3SERPINE1, VEGFA, BMP6, MMP3, IL10, IL8
40alanine32 6.2CFTR, IGHE, GSTP1, MMP3, CD14, BMP6
41actinomycin d32 6.2CFTR, GSTP1, IL8, CCL2, IGHE, IFNG
42retinoic acid32 42 18 7.9RPS27A, ELANE, ELN, TGFB1, PRTN3, SLPI
43lactate32 5.9HSPA5, GLUD1, TNF, OTC, CRP, RPS27A
44creatinine32 5.8MMP1, F2, GLUD1, OTC, CRP, NOS1
45methotrexate32 34 42 9 9 9.8F2, HLA-DRB1, TNF, CRP, NOS1, NOS3
46cyclosporin a32 42 6.8RPS27A, ELANE, TGFB1, SLPI, NOS1, TNF
47estrogen32 5.6GC, SERPINC1, SERPINA6, SERPINA1, SERPINE1, SERPINA3
48dexamethasone32 42 34 9 9 8.7SFTPB, GLUD1, TNF, NOS1, RPS27A, ELN
49cycloheximide32 4.6TNF, SFTPB, ELN, TGFB1, PRTN3, SLPI
50serine32 4.1SERPINA1, SEPSECS, SERPINE1, SERPINA3, SERPINB1, BPI

GO Terms for genes affiliated with Alpha 1-antitrypsin Deficiency

Sources:
12Gene Ontology
See all sources

Cellular components related to alpha 1-antitrypsin deficiency according to GeneDecks:

idNameGO IDScoreTop Affiliating Genes
1platelet alpha granule lumenGO:0310938.9TGFB1, A2M, VEGFA, SERPINE1, SERPINA1
2proteinaceous extracellular matrixGO:0055788.7SERPINA1, VEGFA, MMP1, MMP12, MMP3, ELN
3extracellular regionGO:0055765.7CCL2, IFNG, F2, SPINT2, CRP, A2M
4extracellular spaceGO:0056154.8SFTPB, IL8, CCL2, IFNG, F2, TNF

Biological processes related to alpha 1-antitrypsin deficiency according to GeneDecks:

(show all 23)
idNameGO IDScoreTop Affiliating Genes
1negative regulation of platelet activationGO:01054410.1NOS3, F2, SERPINE2
2acute-phase responseGO:0069539.7CRP, F2, SERPINA3, SERPINA1
3positive regulation of vitamin D biosynthetic processGO:0605579.7IFNG, TNF
4response to lead ionGO:0102889.6NOS3, CRP, SERPINA1
5response to hyperoxiaGO:0550939.6SFTPB, SERPINE1, NOS3
6response to heatGO:0094089.4NOS3, NOS1, CCL2, CD14
7regulation of sodium ion transportGO:0020289.4TGFB1, NOS3, NOS1
8platelet degranulationGO:0025769.3TGFB1, A2M, HSPA5, VEGFA, SERPINE1, SERPINA1
9lipopolysaccharide-mediated signaling pathwayGO:0316639.3TGFB1, NOS3, TNF, CCL2
10positive regulation of MAP kinase activityGO:0434069.2VEGFA, TNF, ELANE, TGFB1
11positive regulation of protein complex assemblyGO:0313349.2TGFB1, TNF, VEGFA
12endoplasmic reticulum unfolded protein responseGO:0309689.2HSPA5, IFNG, CCL2, IL8, VIMP
13negative regulation of tumor necrosis factor productionGO:0327209.1IL10, GSTP1, BPI, VIMP
14negative regulation of growth of symbiont in hostGO:0441309.1ELANE, TNF, IFNG, IL10
15platelet activationGO:0301689.1TGFB1, A2M, HSPA5, F2, VEGFA, SERPINE1
16response to glucocorticoid stimulusGO:0513849.0TNF, CCL2, IL10, SERPINE1, SFTPB
17negative regulation of interleukin-6 productionGO:0327158.9TNF, IL10, BPI, VIMP
18cellular response to lipopolysaccharideGO:0712228.1SERPINE1, IFNG, CCL2, IL8, IL10, GSTP1
19blood coagulationGO:0075968.0HSPA5, NOS1, NOS3, A2M, TGFB1, F2
20response to drugGO:0424937.9TGFB1, NOS3, OTC, TNF, IFNG, CCL2
21response to hypoxiaGO:0016667.9TGFB1, NOS3, NOS1, CRP, TNF, CCL2
22anti-apoptosisGO:0069167.7RPS27A, NOS3, TMBIM4, TNF, HSPA5, CCL2
23inflammatory responseGO:0069547.5TGFB1, CRP, TNF, CCL2, IL8, IL10

Molecular functions related to alpha 1-antitrypsin deficiency according to GeneDecks:

idNameGO IDScoreTop Affiliating Genes
1protease bindingGO:0020209.6ELANE, TNF, SERPINE1, SERPINA1, SERPINC1
2serine-type endopeptidase inhibitor activityGO:0048679.6SERPINE2, SLPI, A2M, SPINT2, SERPINB1, SERPINA3
3heparin bindingGO:0082019.1ELANE, CCL2, MPO, VEGFA, SERPINC1, SERPINE2
4enzyme bindingGO:0198998.9PRTN3, TGFB1, A2M, CFTR, VIMP, SLPI
5protein bindingGO:0055154.4TNF, TMBIM4, CRP, NOS1, NOS3, A2M

Sources for Alpha 1-antitrypsin Deficiency

2CDC
11FMA
18HMDB
19ICD9CM
20KEGG
24MeSH
25MGI
27NCIt
28NDF-RT
31NINDS
32Novoseek
33OMIM
35PubMed
36QIAGEN
43UMLS