Sources: 12Gene Ontology See all sources |
Cellular components related to breast carcinoma according to GeneDecks: (show all 15)
| id | Name | GO ID | Score | Top Affiliating Genes | | 1 | cytoplasm | GO:005737 | 49.7 | PIK3CG, LRP1, SH3GL2, NCOA3, WASL, KIT | | 2 | plasma membrane | GO:005886 | 40.1 | PIK3R1, PIK3CG, LRPAP1, SH3GL2, RECK, CNR2 | | 3 | cytosol | GO:005829 | 39.0 | PIKFYVE, PIK3CA, PIK3R1, PIK3CG, SH3GL2, NDC80 | | 4 | extracellular region | GO:005576 | 32.2 | PIP, LRPAP1, KISS1, KIAA0100, KITLG, VWF | | 5 | nucleoplasm | GO:005654 | 27.4 | ZNF217, NCOA2, NCOA3, NCOR1, RCC1, PCNA | | 6 | extracellular space | GO:005615 | 26.4 | KIT, KITLG, VTN, SFN, SFRP1, SFRP4 | | 7 | integral to plasma membrane | GO:005887 | 22.2 | LRP1, CNR2, CNTN2, SELP, SELPLG, VIPR1 | | 8 | cell surface | GO:009986 | 19.1 | LRPAP1, CNTN2, KISS1R, SFRP1, SFRP4, VLDLR | | 9 | perinuclear region of cytoplasm | GO:048471 | 17.9 | PIKFYVE, BUB1B, SELE, VLDLR, LMNA, RAD51 | | 10 | extracellular matrix | GO:031012 | 14.7 | VWF, VTN, SFRP1, SERPINE1, VCAN, CLU | | 11 | focal adhesion | GO:005925 | 14.4 | BRCA1, VCL, LIMD1, LIMA1, PAK1, KEAP1 | | 12 | external side of plasma membrane | GO:009897 | 13.7 | KIT, VWF, SELP, KDR, KCNJ3, S1PR1 | | 13 | platelet alpha granule lumen | GO:031093 | 12.3 | VWF, SERPINA1, SERPINE1, VEGFA, VEGFB, VEGFC | | 14 | membrane raft | GO:045121 | 12.0 | PIKFYVE, SELE, BSG, SDC4, FURIN, JAK2 | | 15 | nucleus | GO:005634 | INF | ZNF202, LRP1, NDC80, NCL, NCOA2, NCOA3 |
Biological processes related to breast carcinoma according to GeneDecks: (show top 50)
(show all 70)
| id | Name | GO ID | Score | Top Affiliating Genes | | 1 | signal transduction | GO:007165 | 26.6 | SH3GL2, KIT, KITLG, SFN, VLDLR, VEGFC | | 2 | apoptotic process | GO:006915 | 24.0 | KIF1B, SFN, BUB1, BUB1B, RBM5, NBN | | 3 | positive regulation of cell proliferation | GO:008284 | 22.9 | KIT, SFRP1, BTC, NBN, VIPR1, VEGFA | | 4 | positive regulation of transcription from RNA polymerase II promoter | GO:045944 | 20.8 | NCOA2, NCOA3, RB1, SERPINE1, BRCA1, VEGFA | | 5 | blood coagulation | GO:007596 | 20.4 | PIK3CA, PIK3R1, PIK3CG, VWF, SELP, SELPLG | | 6 | negative regulation of apoptotic process | GO:043066 | 19.8 | PIK3CG, SFRP1, PCGF2, BTC, BTG2, RB1CC1 | | 7 | angiogenesis | GO:001525 | 19.1 | PIK3CA, PIK3CG, NCL, SETD2, SERPINE1, VEGFA | | 8 | cell proliferation | GO:008283 | 19.0 | KITLG, SFN, PCNA, BUB1, BUB1B, NBN | | 9 | response to drug | GO:042493 | 19.0 | SFRP1, NBN, VLDLR, VEGFC, MYC, LIPE | | 10 | positive regulation of transcription, DNA-dependent | GO:045893 | 18.9 | NCOA3, SFRP1, RB1, SEC14L2, BRCA1, BRCA2 | | 11 | cell adhesion | GO:007155 | 18.2 | CNTN2, KITLG, VWF, VTN, SELP, SELPLG | | 12 | virus-host interaction | GO:019048 | 17.8 | PIK3R1, VRK2, BUB1, RB1, VIM, BIN1 | | 13 | positive regulation of cell migration | GO:030335 | 16.4 | VEGFA, BMP2, KDR, S1PR1, CGA, FURIN | | 14 | innate immune response | GO:045087 | 16.1 | PIK3CG, CLU, BCL2, BCL2L1, LGALS3, S100A7 | | 15 | protein autophosphorylation | GO:046777 | 16.1 | KIT, VRK2, PAK1, KDR, CHEK2, MTOR | | 16 | platelet activation | GO:030168 | 16.0 | PIK3CA, PIK3R1, PIK3CG, VWF, SELP, SERPINA1 | | 17 | cell cycle arrest | GO:007050 | 15.4 | RB1, NBN, VASH1, MYC, RASSF1, BARD1 | | 18 | inflammatory response | GO:006954 | 15.0 | PIK3CG, CNR2, KIT, SELE, SELP, SERPINA3 | | 19 | positive regulation of gene expression | GO:010628 | 14.9 | NCOA3, KIT, SFRP4, BRAF, VEGFA, VDR | | 20 | anti-apoptosis | GO:006916 | 14.9 | PIK3CA, GCLC, SERPINB2, BRAF, VHL, VEGFB | | 21 | fibroblast growth factor receptor signaling pathway | GO:008543 | 14.9 | PIK3CA, PIK3R1, BRAF, RAF1, BAD, MTOR | | 22 | nerve growth factor receptor signaling pathway | GO:048011 | 14.8 | PIK3CA, PIK3R1, SH3GL2, BRAF, RAF1, RAC1 | | 23 | response to estradiol stimulus | GO:032355 | 14.8 | SFRP4, SERPINA1, BRCA2, VDR, RARA, BID | | 24 | insulin receptor signaling pathway | GO:008286 | 14.8 | PIK3CA, PIK3R1, RAF1, MTOR, CDK1, IRS1 | | 25 | regulation of cell proliferation | GO:042127 | 14.7 | KIT, SERPINE1, BRCA1, BID, BIRC7, SCGB3A1 | | 26 | induction of apoptosis | GO:006917 | 14.7 | BOK, BAD, BAX, LALBA, CEBPB, CDKN1B | | 27 | response to hypoxia | GO:001666 | 14.6 | SFTPB, SERPINA1, VEGFA, BMP2, RAF1, LIMD1 | | 28 | phosphatidylinositol-mediated signaling | GO:048015 | 14.5 | PIK3CA, PIK3R1, NDC80, PCNA, BUB1B, BAD | | 29 | leukocyte migration | GO:050900 | 14.3 | PIK3CA, PIK3R1, SELP, SELPLG, BSG, MSN | | 30 | cell-cell signaling | GO:007267 | 14.3 | BMP2, LALBA, CGA, CGB, CD86, ITGB2 | | 31 | positive regulation of endothelial cell proliferation | GO:001938 | 14.3 | VEGFA, VEGFB, BMP2, BMP6, KDR, MTOR | | 32 | activation of MAPK activity | GO:000187 | 14.3 | KIT, LPAR1, LPAR2, S1PR2, CDK1, INSR | | 33 | positive regulation of protein phosphorylation | GO:001934 | 14.1 | RB1CC1, VEGFA, BMP2, MTOR, CD40, ITGB3 | | 34 | response to lipopolysaccharide | GO:032496 | 14.0 | CNR2, SFTPB, SELE, SELP, SERPINA1, S100A7 | | 35 | aging | GO:007568 | 13.9 | VDR, BAK1, FURIN, JUN, GSN, IL1B | | 36 | positive regulation of MAPK cascade | GO:043410 | 13.8 | KIT, LPAR1, LPAR2, LIF, KDR, LEP | | 37 | female pregnancy | GO:007565 | 13.8 | LIPE, CLDN4, BCL2, SCGB1A1, LEP, IRF1 | | 38 | positive regulation of cell division | GO:051781 | 13.6 | BTC, VEGFA, VEGFB, VEGFC, YBX1, FIGF | | 39 | platelet degranulation | GO:002576 | 13.5 | VWF, SELP, SERPINA1, SERPINE1, VEGFA, VEGFB | | 40 | positive regulation of peptidyl-tyrosine phosphorylation | GO:050731 | 13.3 | KITLG, VTN, VEGFA, VEGFB, LIF, MTOR | | 41 | cellular response to hypoxia | GO:071456 | 13.2 | SFRP1, VLDLR, VHL, VEGFA, LMNA, BMP7 | | 42 | response to ethanol | GO:045471 | 12.9 | BGLAP, BCL2, BAK1, FYN, CDK1, MMP9 | | 43 | positive regulation of protein kinase B signaling cascade | GO:051897 | 12.6 | PIK3CG, VEGFB, MTOR, MST1R, INS, INSR | | 44 | MAPK cascade | GO:000165 | 12.5 | MYC, RAF1, PAK1, CDK1, INS, FGF8 | | 45 | cellular response to mechanical stimulus | GO:071260 | 12.2 | SFTPB, CHEK1, BAD, BAK1, CD40, ITGB1 | | 46 | activation of MAPKK activity | GO:000186 | 11.5 | KISS1R, RAF1, JAK2, MAP3K7, MAP2K2, MAP3K13 | | 47 | negative regulation of transcription, DNA-dependent | GO:045892 | INF | ZNF217, SFRP1, GCLC, RB1, BRCA1, BRMS1 | | 48 | negative regulation of cell proliferation | GO:008285 | INF | KISS1R, SFN, SFRP1, SFRP4, BTG2, RBM5 | | 49 | positive regulation of apoptotic process | GO:043065 | INF | SFRP1, SFRP4, RBM5, LPAR1, BMP2, RARG | | 50 | negative regulation of transcription from RNA polymerase II promoter | GO:000122 | INF | ZNF202, NCOA2, NCOR1, PCGF2, RBBP8, VLDLR |
Molecular functions related to breast carcinoma according to GeneDecks: (show all 15)
| id | Name | GO ID | Score | Top Affiliating Genes | | 1 | ATP binding | GO:005524 | 26.2 | PIKFYVE, PIK3CA, PIK3CG, KIT, KIF1B, VRK2 | | 2 | protein homodimerization activity | GO:042803 | 19.6 | KIT, VWF, VEGFA, VEGFB, BMP2, BIRC5 | | 3 | identical protein binding | GO:042802 | 18.5 | SH3GL2, CNTN2, SFRP1, PCNA, VIM, RAD51 | | 4 | protein kinase binding | GO:019901 | 17.7 | RB1CC1, VIM, LIPE, PAK1, BCL2L1, CHEK2 | | 5 | protein heterodimerization activity | GO:046982 | 17.2 | BRAF, VEGFA, VEGFB, BOK, MYC, BMP2 | | 6 | receptor binding | GO:005102 | 17.1 | SELPLG, SERPINE1, BMP2, RARA, LIF, BCAP31 | | 7 | transcription factor binding | GO:008134 | 16.9 | RB1, NBN, VHL, LMO4, MYC, RARA | | 8 | enzyme binding | GO:019899 | 16.7 | BRCA1, VHL, RARA, RAC1, BLZF1, BIRC5 | | 9 | growth factor activity | GO:008083 | 16.5 | KITLG, BTC, VEGFA, VEGFB, VEGFC, BMP2 | | 10 | transcription regulatory region DNA binding | GO:044212 | 14.2 | ZNF217, NCOR1, BRCA1, PAX2, JUN, FOS | | 11 | heparin binding | GO:008201 | 13.7 | LRPAP1, VTN, SFRP1, SELP, VEGFA, VEGFB | | 12 | cytokine activity | GO:005125 | 12.8 | KITLG, VEGFA, BMP2, BMP6, BMP7, LIF | | 13 | sequence-specific DNA binding | GO:043565 | INF | VDR, MYC, RARG, RARA, RARB, ZGPAT | | 14 | protein binding | GO:005515 | INF | ZNF217, PIKFYVE, PIK3CA, PIK3R1, PIK3CG, LRP1 | | 15 | sequence-specific DNA binding transcription factor activity | GO:003700 | INF | ZNF217, ZNF202, PCGF2, RB1, VDR, LMO4 |
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