Summaries for Cholestasis

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44Wikipedia, 22MalaCards
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Wikipedia: In medicine, cholestasis is a condition where bile cannot flow from the liver to the duodenum. The two...44 more...

MalaCards: Cholestasis, also known as obstruction of bile duct nos (disorder), is related to intrahepatic cholestasis of pregnancy and intrahepatic cholestasis. An important gene associated with Cholestasis is ATP8B1 (ATPase, aminophospholipid transporter, class I, type 8B, member 1), and among its related pathways are ABC transporters and Methotrexate Pathway, Pharmacokinetics. The compounds daunorubicin and Conjugated Estrogens have been mentioned in the context of this disorder. Affiliated tissues include liver, lung and thyroid, and related mouse phenotypes are endocrine/exocrine gland and renal/urinary system.

Aliases & Descriptions for Cholestasis

Sources:
6Disease Ontology, 7diseasecard, 8DISEASES, 32Novoseek , 43UMLS, 40SNOMED-CT, 19ICD9CM, 24MeSH, 27NCIt
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Aliases & Descriptions:

cholestasis 6 7 8 32 43
obstruction of bile duct nos (disorder) 6
obstruction of bile duct (disorder) 6
occlusion of bile duct (disorder) 6
obstruction of bile duct 6
cardiovascular occlusion 43
bile duct obstruction 32
cholestasis (finding) 6
bile occlusion 6
obstruction 43

External Ids:

ICD9CM19 576.2
SNOMED-CT40 197447004, 30144000, 33688009 197446008, more

Related Diseases for Cholestasis

Sources:
13GeneCards, 14GeneDecks
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Diseases related to cholestasis by text searches and GeneDecks gene sharing:

(show top 50)    (show all 1077)
idRelated DiseaseScoreTop Affiliating Genes
1intrahepatic cholestasis of pregnancy40.3BCL2, BAX, LAP3, CES1, ATP8B1, IL2RA
2intrahepatic cholestasis40.0SCT, ATP8B1, JAG1, ALPP, HLA-G, NR1H2
3chronic obstructive pulmonary disease38.7SERPINA1, MPO, IL6, F2RL1, TNF, CYP1A1
4benign recurrent intrahepatic cholestasis36.0LIPC, LCAT, CETP, ATP8B1, ABCB11, GGT3P
5obstructive jaundice35.9LCAT, CCK, GPT, ALPP, TTR, SLC17A5
6cholestasis, progressive familial intrahepatic 135.7ATP8B1, JAG1, NR1H4, ABCB11, ABCB4, SLC10A2
7neonatal intrahepatic cholestasis caused by citrin deficiency34.6GPT, F2, SLC17A5, SLC25A13
8sleep apnea34.3PCNA, RBP4, LPL, IL6, APOA1, APOE
9citrin deficiency34.3ASS1, GPT, F2, SLC17A5, SLC25A13
10apnea34.3PCNA, RBP4, LPL, BCHE, BAX, IL6
11pulmonary disease34.2PCNA, RBP4, SERPINC1, SERPINA1, VEGFA, LPL
12extrahepatic cholestasis33.6ALPP, ABCC1, ABCC2, ABCC3, GGT1
13hepatitis33.1RBP4, SERPINA1, SEPSECS, IL2RB, GPT, IFNA2
14cholestasis, progressive familial intrahepatic 333.1ATP8B1, JAG1, ABCB11, ABCB4
15obstructive lung disease32.9SERPINA1, ALB, CALCA, TNF, ACE, SLPI
16bronchitis32.9ANPEP, CYP1A1, PPARA, SHBG, TGFB2, TAC1
17duodenal ulcer31.0SCT, MPO, CD14, IL2RB, IL6, CCK
18alpha 1-antitrypsin deficiency30.6SERPINC1, SERPINA1, SEPSECS, VEGFA, MPO, CD14
19alagille syndrome30.5LCAT, ATP8B1, JAG1, APOA1, ALB, NOTCH2
20primary biliary cirrhosis30.5SEPSECS, BGLAP, SCT, CETP, IL2RB, GPT
21jaundice30.3BLVRA, SCT, CIRH1A, LCAT, LAP3, CEACAM3
22arc syndrome30.3VPS33B, LAMP1, CEACAM5, DPP4
23abcb11-related intrahepatic cholestasis30.2AVP, NR3C2, CRH, DNAH8, POMC
24copd30.0SERPINA1, VEGFA, BGLAP, BCL2, BAX, AVP
25gastric ulcer29.6PCNA, VEGFA, MPO, IL6, IGF1, ALB
26hepatitis c29.6SERPINA1, LIPC, GPT, IFNA2, F2, HLA-DRB1
27biliary atresia29.4RBP4, VIL1, VEGFA, ATP8B1, JAG1, CD14
28asthma29.1CNR1, PCNA, SERPINA1, VEGFA, LIFR, BGLAP
29bronchial asthma28.9VEGFA, BGLAP, CEACAM3, MPO, CD14, IL2RA
30bronchiectasis28.8SERPINA1, MPO, CD14, ITGAV, IL6, ALB
31angioedema28.6SERPINC1, SERPINA1, LCAT, CETP, IL6, IFNA2
32choledocholithiasis28.6GPT, ALB, ALPP, ABCB4, SLC17A5, GGT1
33hypertrophic cardiomyopathy28.6ITGAV, ITGB6, IL6, APEH, IGF1, ALB
34cholelithiasis28.3APOA1, APOE, ANPEP, CCK, GPT, F2
35allergic asthma28.2PCNA, BCL2, CD14, CD160, IL2RA, IL2RB
36emphysema28.2PCNA, SERPINA1, VEGFA, BGLAP, BAX, MPO
37retinol binding protein28.1RBP4, MYC, LIPC, MKI67, APOA1, ALB
38iron overload28.1RBP4, BCS1L, GPT, F5, F2, ALB
39pulmonary function28.0SERPINA1, CEACAM3, MPO, CD14, IL6, GPT
40pulmonary embolism27.8SERPINC1, MPO, FGA, IFNA2, F5, F3
41liver cirrhosis27.7CNR1, GCG, RBP4, SERPINC1, SERPINA1, SEPSECS
42pulmonary emphysema27.7PCNA, SERPINA1, VEGFA, BAX, ITGB6, CYP2A6
43retinal vein occlusion27.6SERPINC1, VEGFA, IL6, F5, F3, F2
44infertility27.6SERPINA1, VEGFA, LIFR, CLU, BCL2, BAX
45multiple sclerosis27.5CD14, IL2RA, APOE, HLA-B, HLA-DQA1, HLA-DQB1
46recurrent respiratory papillomatosis27.5IFNA2, ESR1, HLA-DQA1, HLA-DQB1, HLA-DRB1, TP53
47ileus27.3GCG, IL6, CCK, F2, CALCA, TNF
48pulmonary hypertension27.3PCNA, SERPINC1, VEGFA, BAX, ASS1, FGA
49influenza27.3RAB11A, BAX, LAMP1, CES1, MPO, GYPB
50respiratory failure27.2RBP4, SERPINC1, SERPINA1, BCHE, IL6, CCK

Graphical network of the top 20 diseases related to cholestasis:



Graphical network of diseases related to cholestasis

Clinical Features for Cholestasis

Drugs & Therapeutics for Cholestasis

Sources:
4CenterWatch, 29NIH Clinical Center, 5ClinicalTrials, 43UMLS, 28NDF-RT
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Approved drugs:

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Drug clinical trials:

Search ClinicalTrials for cholestasis

Search NIH Clinical Center for cholestasis

Search CenterWatch for cholestasis

Genetic Tests for Cholestasis

Anatomical Context for Cholestasis

Sources:
22MalaCards
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MalaCards organs/tissues related to cholestasis:

22
Liver, Lung, Thyroid, Breast, Placenta, T cells, B cells, Endothelial, Fetal liver, Fetal lung, Fetal thyroid, Pituitary

Phenotypes for genes affiliated with Cholestasis

Sources:
25MGI
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MGI Mouse Phenotypes related to cholestasis:

25 (show all 27)
idDescriptionMGI Source AccessionScoreTop Affiliating Genes
1endocrine/exocrine gland phenotypeMP:000537910.6FUT1, MNT, IL2RB, AQP8, DPP4, OPRK1
2renal/urinary system phenotypeMP:000536710.2CLU, BCL2, LCAT, BAX, AVP, JAG1
3craniofacial phenotypeMP:000538210.1NCOA6, LAMP1, JAG1, MNT, FBN1, ALPL
4other phenotypeMP:000539510.0CNR1, CLU, FBN1, APOE, ALPL, ESR2
5respiratory system phenotypeMP:00053889.9LPL, CD14, FBN1, APOE, ALPL, CALCA
6hematopoietic system phenotypeMP:00053979.9PCNA, BCL2, JAG1, ITGB6, FBN1, CCND1
7hearing/vestibular/ear phenotypeMP:00053779.8RDX, MYC, BCL2, BAX, ATP8B1, JAG1
8embryogenesis phenotypeMP:00053809.6NCOA6, SERPINC1, MYC, LIFR, MNT, ITGAV
9no phenotypic analysisMP:00030129.1CNR1, PCNA, VEGFA, MYC, JAG1, MNT
10digestive/alimentary phenotypeMP:00053819.0NCOA6, GCG, VEGFA, MYC, BCL2, JAG1
11integument phenotypeMP:00107718.8NCOA6, CNR1, MYC, BCL2, LAMP1, MNT
12normal phenotypeMP:00028738.7RBP4, VIL1, VEGFA, MYC, LAMP1, AVP
13nervous system phenotypeMP:00036318.6NCOA6, CNR1, RDX, SERPINC1, MYC, LIFR
14mortality/agingMP:00107688.4NCOA6, CNR1, GCG, SERPINC1, VEGFA, LPL
15vision/eye phenotypeMP:00053918.3NCOA6, RBP4, SERPINC1, VEGFA, BCL2, LCAT
16reproductive system phenotypeMP:00053898.3NCOA6, RBP4, VEGFA, LIPC, BCHE, FUT1
17behavior/neurological phenotypeMP:00053868.1CNR1, RDX, SCT, AVP, JAG1, MNT
18skeleton phenotypeMP:00053908.0CNR1, VEGFA, MYC, LIFR, BAX, LAMP1
19muscle phenotypeMP:00053697.6NCOA6, RBP4, VEGFA, LPL, MYC, CLU
20adipose tissue phenotypeMP:00053757.3CNR1, LPL, MYC, BCL2, CD14, IL6
21tumorigenesisMP:00020067.1MYC, BCL2, MNT, ITGAV, IL6, CCND1
22growth/size phenotypeMP:00053787.0NCOA6, CNR1, GCG, LPL, MYC, LIFR
23cardiovascular system phenotypeMP:0005385INFNCOA6, RBP4, SERPINC1, VEGFA, LPL, MYC
24cellular phenotypeMP:0005384INFNCOA6, CNR1, PCNA, RBP4, VEGFA, MYC
25immune system phenotypeMP:0005387INFCLU, ITGAV, IL6, FBN1, , ANPEP
26homeostasis/metabolism phenotypeMP:0005376INFNCOA6, CNR1, RDX, GCG, RBP4, SERPINC1
27liver/biliary system phenotypeMP:0005370INFNCOA6, RDX, SERPINC1, VEGFA, LPL, LCAT

Publications for genes affiliated with Cholestasis

Sources:
35PubMed
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Articles related to cholestasis:

(show top 50)    (show all 302)
idTitleAuthorsYearAffiliating Genes
1Clinical features and genotype-phenotype correlations in children with progressive familial intrahepatic cholestasis type 3 related to ABCB4 mutations. (21119540)Colombo C.... Maggiore G.2011ABCB4
2Heterozygous FIC1 deficiency: a new genetic predispos ition to transient neonatal cholestasis. (20216097)Jacquemin E.... Bernard O.2010ATP8B1
3The c.504T>C (p.Asn168Asn) polymorphism in the ABC B4 gene as a predisposing factor for intrahepatic cholestasis of pregnancy in G reece. (19840247)Kitsiou-Tzeli S.... Tsezou A.2010ABCB4
4Most common SLC25A13 mutation in 400 Chinese infants with intrahepatic cholestasis. (20458766)Fu H.Y.... Wang J.S.2010SLC25A13
5Is increased maternal endothelin-1 concentration asso ciated with neonatal asphyxia and preterm delivery in intrahepatic cholestasis of pregnancy? (19862540)Kebapcilar A.G.... Gokulu S.G.2010EDN1, AHSG
6Contribution of high basolateral bile salt efflux to the lack of hepatotoxicity in rat in response to drugs inducing cholestasis in human. (20147439)Jemnitz K.... Vereczkey L.2010ABCB11
7Genetic determinants of drug-induced cholestasis and intrahepatic cholestasis of pregnancy. (20422497)Pauli-Magnus C.... Stieger B.2010NR1H4, ABCB4
8Combined features of low phospholipid-associated chol elithiasis and progressive familial intrahepatic cholestasis 3. (19840255)Poupon R.... Housset C.2010ABCB4
9Folding defects in P-type ATP 8B1 associated with her editary cholestasis are ameliorated by 4-phenylbutyrate. (19918981)van der Velden L.M.... van de Graaf S.F.2010ATP8B1
10Calcineurin inhibitor-related cholestasis complicatin g lung transplantation. (20417810)Oto T.... Miyoshi S.2010IL2RA, CABIN1
11Clusterin expression in cholestasis, hepatocellular carcinoma and liver fibrosis. (19413638)Aigelsreiter A.... Denk H.2009CLU
12Switch from Mnt-Max to Myc-Max induces p53 and cyclin D1 expression and apoptosis during cholestasis in mouse and human hepatocytes. (19086036)Yang H.... Lu S.C.2009TP53, MYC, CCND1
13Effects of bezafibrate on dyslipidemia with cholestas is in children with familial intrahepatic cholestasis-1 deficiency manifesting progressive familial intrahepatic cholestasis. (19059530)Nagasaka H.... Miida T.2009ABCB4
14Differential effects of progressive familial intrahep atic cholestasis type 1 and benign recurrent intrahepatic cholestasis type 1 mu tations on canalicular localization of ATP8B1. (19731236)Folmer D.E.... Paulusma C.C.2009ATP8B1
15Intrahepatic cholestasis of pregnancy: when should you look further? (19266607)Hardikar W.... Angus P.2009ABCB4
16Neonatal intrahepatic cholestasis caused by citrin de ficiency: clinical and laboratory investigation of 13 subjects in mainland of C hina. (19185551)Song Y.Z.... Zheng X.Y.2009SLC25A13, AFP
17Identification and diagnosis of three novel mutations in SLC25A13 gene of neonatal intrahepatic cholestasis caused by citrin deficiency (19099775)Song Y.Z.... Kobayashi K.2008SLC25A13
18Sequencing and functional assessment of hPXR (NR1I2) variants in intrahepatic cholestasis of pregnancy. (18800312)Owen B.M.... Dixon P.H.2008NR1I2
19The polymorphism of HLA-DR and -DQ allelic genes associated with intrahepatic cholestasis of pregnancy. (18554163)Ding Y.... Yang X.2008HLA-DQB1, HLA-DRB1
20Study on relationship between expression of familial intrahepatic cholestasis 1 mRNA in placenta and Intrahepatic cholestasis of pregnancy (18575333)Xu Z.... Xing A.Y.2008ATP8B1
21Nutritional status of infants with neonatal cholestasis. (17717748)Yuksekkaya H.A.... Aydogdu S.2008TTR
22Role of vitamin C transporters and biliverdin reductase in the dual pro-oxidant and anti-oxidant effect of biliary compounds on the placental-fetal unit in cholestasis during pregnancy. (18706437)Perez M.J.... Marin J.J.2008NR0B2, SLC23A1, SLC23A2
23Increased susceptibility for intrahepatic cholestasis of pregnancy and contraceptive-induced cholestasis in carriers of the 1331T>C polymorphism in the bile salt export pump. (18176959)Meier Y.... Pauli-Magnus C.2008ABCB11, ABCC2
24Analysis of tear enzymes in the diagnosis of obstruc tive jaundice associated with subhepatic cholestasis (19143075)Terekhina N.A.... Soldatenko N.V.2008GGT1
25Glucagon-like peptide-1 and its receptor agonist exendin-4 modulate cholangiocyte adaptive response to cholestasis. (17631146)Marzioni M.... Benedetti A.2007GLP1R, GCG
26Intrahepatic cholestasis of pregnancy: the severe form is associated with common variants of the hepatobiliary phospholipid transporter ABCB4 gene. (16891356)Wasmuth H.E.... Lammert F.2007ABCB4
27Novel resequencing chip customized to diagnose mutations in patients with inherited syndromes of intrahepatic cholestasis. (17241866)Liu C.... Bezerra J.A.2007JAG1, ABCB11, ABCB4
28Prognosis, with evaluation of general biochemistry, of liver disease in lymphoedema cholestasis syndrome 1 (LCS1/Aagenaes syndrome). (16635916)Drivdal M.... Aagenaes O.2006GGT1, ALPP
29Study on the association between estrogen receptor alpha gene polymorphism and intrahepatic cholestasis of pregnancy (16762184)Zhang L.... Xing A.Y.2006ESR1
30Intrahepatic cholestasis of pregnancy: three novel MDR3 gene mutations. (16696816)Floreani A.... Mazzella G.2006ABCB4
31The relationship between P53 and hypoxia-inducible transcription factor-1alpha in the placenta of patient with intrahepatic cholestasis of pregnancy under acute hypoxic condition (17236590)Hu Y.Y.... Liu S.Y.2006TP53, HIF1A
32Effects of oral and transdermal estradiol administration on levels of sex hormone-binding globulin in postmenopausal women with and without a history of intrahepatic cholestasis of pregnancy. (15784702)Ropponen A.... Ylikorkala O.2005SHBG
33Childhood cholestasis and bile transporters (16137474)Hierro L.... Jara P.2005ATP8B1
34Characterization of mutations in ATP8B1 associated with hereditary cholestasis. (15239083)Klomp L.W.... Bull L.N.2004ATP8B1
35Molecular basis of intrahepatic cholestasis. (15768832)Carlton V.E.... Bull L.N.2004JAG1, TJP2, CIRH1A
36Reduced hepatic expression of farnesoid X receptor in hereditary cholestasis associated to mutation in ATP8B1. (15317749)Alvarez L.... Lapunzina P.2004NR1H4, NR0B2
37Sequence analysis of bile salt export pump (ABCB11) and multidrug resistance p-glycoprotein 3 (ABCB4, MDR3) in patients with intrahepatic cholestasis of pregnancy. (15077010)Pauli-Magnus C.... Kullak-Ublick G.A.2004ABCB11, ABCB4
38The cannabinoid agonist WIN 55, 212-2 increases nocic eption threshold in cholestatic rats: implications for the treatment of the pru ritus of cholestasis. (13679241)Gingold A.R.... Bergasa N.V.2003CNR1
39Association of single nucleotide polymorphisms of the bile salt export pump gene with intrahepatic cholestasis of pregnancy. (12825874)Eloranta M.L.... Heinonen S.2003ABCB11
40Obstetric cholestasis with elevated gamma glutamyl transpeptidase: incidence, presentation and treatment. (14535985)Milkiewicz P.... Elias E.2003GGT1, GPT, ABCB4
41A novel inborn error of metabolism detected by elevated methionine and/or galactose in newborn screening: neonatal intrahepatic cholestasis caused by citrin deficiency. (12692712)Ohura T.... Iinuma K.2003SLC25A13
42Benign recurrent intrahepatic cholestasis progressing to progressive familial intrahepatic cholestasis: low GGT cholestasis is a clinical continuum. (11867191)van Ooteghem N.A.... Houwen R.H.2002GGT3P
43The bile acid synthetic gene 3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase is mutated in progressive intrahepatic cholestasis. (11067870)Schwarz M.... Russell D.W.2000HSD3B7
44Cholesteryl ester transfer activity in liver disease and cholestasis, and its relation with fatty acid composition of lipoprotein lipids. (8740580)Iglesias A.... LasunciA^n M.A.1996CETP
45Mapping of a locus for progressive familial intrahepatic cholestasis (Byler disease) to 18q21-q22, the benign recurrent intrahepatic cholestasis region. (7655458)Carlton V.E.... Freimer N.B.1995ATP8B1
46Genome screening by searching for shared segments: mapping a gene for benign recurrent intrahepatic cholestasis. (7894490)Houwen R.H.... Freimer N.B.1994ATP8B1
47Paraneoplastic cholestasis and hypercoagulability associated with medullary thyroid carcinoma. Resolution with tumor debulking. (8299093)Tiede D.J.... Hay I.D.1994CALCA
48Endogenous digitalis-like factor in liver cirrhosis and cholestasis (7483706)Behrens R.... Nilius R.1993ALB
49Intrahepatic cholestasis in pregnancy. The hepatologist's point of view (8228018)Bacq Y.1993F2, GPT
50Hepatic changes and serum ferritin in pancreatic cancer and other gastrointestinal diseases: the role of cholestasis. (2024931)Basso D.... Naccarato R.1991BCHE, TTR

Expression for genes affiliated with Cholestasis

Sources:
1BioGPS
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Expression patterns in normal tissues for genes affiliated with Cholestasis

Pathways for genes affiliated with Cholestasis

Sources:
20KEGG, 34PharmGKB, 38Reactome, 36QIAGEN, 10EMD Millipore, 41Thomson Reuters
See all sources

Pathways related to cholestasis according to GeneDecks:

(show top 50)    (show all 79)
idPathwayScoreTop Affiliating Genes
1ABC transporters2011.4ABCB7, ABCB6, ABCB11, ABCB1, ABCC1, ABCC4
2Methotrexate Pathway, Pharmacokinetics3411.3SLCO1B1, SLC22A6, SLCO1A2, SLC22A8, ABCG2, ABCC3
3Pravastatin Pathway, Pharmacokinetics3411.2ABCG2, SLC22A8, SLC22A6, SLCO1B3, SLCO1B1, ABCC2
4Metabolism of lipids and lipoproteins3811.2SLC10A2, AKR1D1, ALB, HSD3B7, CYP7A1, CYP8B1
5Taxane Pathway, Pharmacokinetics3411.2ABCG2, CYP3A4, SLCO1B3, ABCC2, ABCC1, ABCB1
6Methotrexate Pathway (Cancer Cell), Pharmacodynamics3411.1SLC22A6, SLC22A8, ABCG2, ABCC4, ABCC3, ABCC2
7Lamivudine Pathway, Pharmacokinetics/Pharmacodynamics3411.1ABCG2, SLC22A2, ABCC4, SLC22A3, ABCC1, ABCB1
8Methotrexate Pathway (Brain Cell), Pharmacokinetics3411.1SLCO1A2, ABCC1, ABCC4, ABCG2, SLC22A8, SLC22A6
9Codeine and Morphine Pathway, Pharmacokinetics3411.1CYP3A4, CYP2D7P1, ABCB1, ABCC2, ABCC3, SLCO1B1
10Graft-versus-host disease2011.1HLA-G, HLA-DQA1, HLA-DPA1, HLA-B, HLA-E
11Mycophenolic acid Pathway, Pharmacokinetics3411.1SLCO1B3, CES1, CYP3A4, CYP3A5, ABCB1, ABCC2
12Vinka Alkaloid Pathway, Pharmacokinetics3411.1ABCC3, ABCC2, CYP3A4, BAX, BCL2, CYP3A5
13Statin Pathway - Generalized, Pharmacokinetics3411.0SLC22A8, ABCG2, ABCC2, ABCB11, ABCB1, CYP3A5
14Irinotecan Pathway, Pharmacokinetics3411.0BCHE, CES1, CYP3A5, ABCB1, ABCC1, ABCC2
15Etoposide Pathway, Pharmacokinetics/Pharmacodynamics3411.0CYP3A4, MPO, ABCC3, ABCB1, ABCC1, NR1I2
16Atorvastatin/Lovastatin/Simvastatin Pathway, Pharmacokinetics3411.0ABCC2, CYP3A5, UGT1A3, SLCO1B1, SLCO1B3, ABCB1
17Primary bile acid biosynthesis2011.0CYP8B1, CYP7A1, CYP7B1, CYP27A1, AMACR, HSD3B7
18CTL Mediated Apoptosis3610.9HLA-B, HLA-DPA1, HLA-DQB1, HLA-DRB1, HLA-G, HLA-E
19Zidovudine Pathway, Pharmacokinetics/Pharmacodynamics3410.9ABCC4, SLC22A6, SLC22A8, ABCG2
20Steroid hormone biosynthesis2010.8CYP7B1, CYP3A5, CYP1A1, UGT1A3, HSD11B2, AKR1D1
21Irinotecan Pathway, Pharmacodynamics3410.8BCHE, ABCG2, ABCC2, UGT1A3, ABCB1, CES1
22Carbamazepine Pathway, Pharmacokinetics3410.7CYP2B6, NR1I3, NR1I2, CYP3A5, ABCC2, CYP3A4
23Autoimmune thyroid disease2010.7HLA-E, HLA-DQA1, HLA-DPA1, HLA-DQB1, HLA-G, HLA-B
24Gefitinib Pathway, Pharmacokinetics3410.7CYP3A5, CYP2C19, CYP3A4, CYP1A1, ABCB1, ABCG2
25Erlotinib Pathway, Pharmacokinetics3410.7CYP3A4, CYP1A1, ABCG2, ABCB1, CYP3A5
26Fluvastatin Pathway, Pharmacokinetics3410.6CYP3A4, CYP3A5, SLCO1B3, CYP2C19, UGT1A3, SLCO1B1
27Allograft rejection2010.6HLA-B, HLA-E, HLA-DRB1, HLA-G, TNF, HLA-DQB1
28Clopidogrel Pathway, Pharmacokinetics3410.5CYP2C19, CYP2B6, CES1, CYP3A4, CYP3A5, ABCB1
29Phagosome2010.5LAMP1, MPO, CD14, ITGAV, HLA-B, HLA-DPA1
30Immune response IL-22 signaling pathway1010.5HLA-DPA1, IL2RB, HLA-DQA1, HLA-DQB1, HLA-DRB1, STAT3
31Type I diabetes mellitus2010.5HLA-B, HLA-DPA1, HLA-DQA1, HLA-DQB1, HLA-E, HLA-G
32Immune response_IL-22 signaling pathway4110.5STAT3, MYC, HLA-DRB1, BCL2, IL2RA, IL2RB
33Colorectal cancer2010.4SMAD2, TGFB2
34Metabolic pathways2010.4CYP2B6, GGT1, CYP2C19, CYP2A6, CYP3A43, CYP1A1
35Retinol metabolism1010.4CYP2B6, CYP2C19, CYP3A5, CYP2A6, CYP3A4, CYP1B1
36Retinol metabolism4110.4CYP3A5, CYP2C19, CYP2B6, CYP2A6, UGT1A3, CYP1B1
37Imatinib Pathway, Pharmacokinetics/Pharmacodynamics3410.3ABCG2, CYP3A5, CYP2C19, CYP3A4
38Biological oxidations3810.3CYP2B6, CYP2A6, CYP3A43, CYP3A4, CYP3A5, CYP2J2
39Cyclophosphamide Pathway, Pharmacokinetics3410.2CYP2C19, CYP3A4, CYP2A6, CYP2B6, CYP3A5
40Bile secretion2010.2SLC22A1, SLCO1B1, NR0B2, NR1H4, RXRA, ABCB1
41Retinol metabolism209.7CYP2A6, CYP3A43, CYP3A4, CYP1A1, UGT1A3, CYP2B6
42Tuberculosis209.5IFNA2, LAMP1, IL6, HLA-DPA1, HLA-DQA1, HLA-DQB1
43Pathways in cancer209.3ITGAV, STAT3, EPAS1, MYC, BCL2, BAX
44Transcription_Role of VDR in regulation of genes involved in osteoporosis419.2TNF, BGLAP, IL6, APOE, CYP3A4, RXRA
45JAK-STAT Pathway369.2SOCS3, IL2RB, IL2RA, FGF19, BCL2, LIFR
46Transcription Role of VDR in regulation of genes involved in osteoporosis109.1APOE, IL6, TNF, CYP3A4, RXRA, IGF1
47IL-10 Pathway369.0STAT3, SOCS3, CD14, MYC, TNF, CCND1
48PPAR signaling pathway20INFRXRA, LPL, , PPARA, CYP27A1, CYP8B1
49Statin Pathway, Pharmacodynamics34INFAPOE, LPL, , CYP7A1, ABCB1, LIPC
50Selected targets of HNF110INFSLCO1B1, SLC4A2, DPP4, NR1I2, NR1H4, HNF1B

Compounds for genes affiliated with Cholestasis

Sources:
32Novoseek , 9DrugBank, 18HMDB, 34PharmGKB, 42Tocris Bioscience
See all sources

Compounds related to cholestasis according to GeneDecks:

(show top 50)    (show all 685)
idCompoundScoreTop Affiliating Genes
1daunorubicin32 9 9 12.9MYC, BCL2, BAX, MPO, CYP1A1, CYP1B1
2Conjugated Estrogens9 9 11.8ESR1, CYP3A4, ABCB1, ABCC1, ABCC2, ABCC3
3rifampicin32 10.8GPT, HNF4A, CYP7A1, CYP1A1, CYP3A4, CYP2A6
4Taurocholic Acid9 18 9 12.7FABP6, CYP7A1, ABCB1, ABCB11, ABCC1, ABCC2
5rifampin34 9 9 12.5CYP3A4, CYP3A43, CYP2A6, CYP2B6, CYP2C19, CYP3A5
6cimetidine32 9 9 12.5SCT, HLA-B, CYP3A4, CYP2A6, CYP2C19, CYP3A5
7glucose32 10.4GCG, SCT, LAP3, AVP, MKI67, IFNA2
8lovastatin32 42 9 9 13.3LPL, LIPC, BCHE, CETP, CES1, APOE
9quercetin32 42 9 18 9 14.3BCL2, UGT1A3, BAX, CCND1, F3, ALPP
10cocaine32 9 9 12.2CNR1, GCG, BCHE, CES1, CCK, GPT
11irinotecan32 34 9 9 13.1VEGFA, BAX, CEACAM5, CEACAM3, CES1, MKI67
12chloramphenicol32 9 9 12.1SERPINC1, LPL, MYC, CETP, MPO, ALPP
13calcitriol32 42 9 18 9 13.9MYC, CLU, BGLAP, CD14, IL2RA, ALB
14doxorubicin32 34 9 9 12.9CLU, CEACAM5, CEACAM3, MKI67, IL2RA, CCND1
15Heme9 18 9 11.8BLVRA, MPO, ALB, CYP7A1, CYP1A1, CYP1B1
16fluorescein32 9 9 11.8SERPINC1, VEGFA, BGLAP, ATP8A1, MPO, IL2RA
17oxygen32 18 10.7RBP4, SERPINA1, LIPC, BLVRA, CLU, BCHE
185fluorouracil32 9.7PCNA, GCG, VEGFA, BCL2, BAX, CEACAM5
19heparin32 9 18 9 12.6GCG, SERPINA1, LPL, LIPC, BGLAP, BCHE
20estradiol32 9 18 9 12.5PCNA, UGT1A3, CEACAM5, MKI67, CCND1, HSD11B2
21estrone32 9 18 9 12.5LPL, BGLAP, UGT1A3, IL2RA, IGF1, ALB
22digoxin32 42 34 9 18 9 14.5F2, CYP3A4, NR1I2, ABCB1, ABCB11, ABCC1
23glutamate32 9.4CNR1, PCNA, GCG, CLU, BCHE, LCAT
24zidovudine32 9 9 11.4LPL, MYC, GPT, IFNA2, F3, ALB
25glycerol32 9 18 9 12.3PCNA, GCG, SERPINC1, LPL, LIPC, ATP8A1
26calcium32 9 18 9 12.2CNR1, RDX, RBP4, VIL1, LIPC, BGLAP
27folate32 9.2RBP4, SERPINC1, MYC, CLU, MKI67, IL2RA
28retinoid32 9.1RBP4, MYC, BCL2, BAX, CD14, IL2RB
29histamine32 18 10.1CNR1, PCNA, GCG, BGLAP, SCT, MPO
30butyrate32 8.8PCNA, GCG, MYC, CLU, BCHE, BCL2
31estrone sulfate32 18 9.8BGLAP, CCK, IGF1, ALB, ESR1, CYP1B1
32paclitaxel32 34 9 9 11.7PCNA, VEGFA, MYC, LIFR, CLU, BCL2
33cyclosporin a32 42 9.7PCNA, SEPSECS, LPL, MYC, LIPC, BGLAP
34paraffin32 8.3PCNA, SERPINA1, VEGFA, MYC, CLU, BGLAP
35cisplatin32 34 9 9 11.2PCNA, VEGFA, MYC, CLU, BGLAP, BCHE
36ezetimibe32 9 9 INFUGT1A3, CETP, CES1, , ANPEP, GPT
37pge232 INFSCT, CD14, , CCK, F2R, F2RL1
38aspirin32 34 18 INFCNR1, PCNA, SERPINC1, BCHE, CETP, FGA
39uric acid32 18 INFRBP4, AVP, , GPT, F5, ALB
40acetylcholine32 9 18 9 INFCNR1, GCG, LPL, BCHE, SCT, MPO
41retinoic acid32 42 18 INFNCOA6, PCNA, RBP4, MYC, CLU, BGLAP
42fibrinogen32 INFSERPINC1, SERPINA1, LIPC, CLU, CEACAM3, CD14
43tacrolimus32 34 9 9 INFPCNA, MYC, IL2RA, IL2RB, , CCND1
44lipid32 INFCNR1, RDX, GCG, RBP4, SERPINA1, LPL
45sterol32 INFLIPC, LCAT, CETP, CES1, , APOE
46cholesterol32 9 18 9 INFRBP4, SERPINA1, LPL, LIFR, LIPC, CLU
47genistein32 9 18 9 INFPCNA, GCG, VEGFA, LPL, MYC, BCL2
48metformin32 34 9 9 INFCNR1, GCG, LPL, , GPT, IGF1
49estrogen32 INFNCOA6, RDX, PCNA, GCG, RBP4, SERPINC1
50dexamethasone32 42 34 9 9 INFPCNA, RBP4, SERPINC1, VEGFA, LPL, MYC

GO Terms for genes affiliated with Cholestasis

Sources:
12Gene Ontology
See all sources

Cellular components related to cholestasis according to GeneDecks:

(show all 12)
idNameGO IDScoreTop Affiliating Genes
1integral to lumenal side of endoplasmic reticulum membraneGO:07155610.9HLA-G, HLA-E, HLA-DRB1, HLA-DQB1, HLA-DQA1, HLA-DPA1
2ER to Golgi transport vesicle membraneGO:01250710.8HLA-G, HLA-E, HLA-DRB1, HLA-DQB1, HLA-DQA1, HLA-DPA1
3basolateral plasma membraneGO:01632310.4SLC23A2, SLCO1B1, SLC10A1, SLCO1B3, SLC4A2, SLC22A6
4integral to plasma membraneGO:00588710.2SLC22A1, OPRK1, OPRD1, ABCC3, ABCC2, ABCC1
5membraneGO:0160209.9SLC22A1, ABCC4, ABCC3, ABCC1, ABCB4, ABCB11
6platelet alpha granule lumenGO:0310939.4TGFB2, ALB, F5, IGF1, FGA, CLU
7endoplasmic reticulum membraneGO:0057899.3CYP7B1, CYP4X1, CYP17A1, CYP3A5, CYP2J2, NR3C2
8nucleoplasmGO:0056548.9SMAD2, NR3C2, NR1I3, NR1I2, SMAD7, NOTCH2
9plasma membraneGO:005886INFOPRD1, SLC23A2, SLC23A1, GGT1, GGT2, SLC22A2
10extracellular spaceGO:005615INFGCG, RBP4, SERPINC1, SERPINA1, VEGFA, LPL
11extracellular regionGO:005576INFSHBG, NOTCH2, CRH, ESR2, CALCA, ALB
12high-density lipoprotein particleGO:034364INF, CETP, LCAT, LIPC, APOE

Biological processes related to cholestasis according to GeneDecks:

(show all 43)
idNameGO IDScoreTop Affiliating Genes
1bile acid metabolic processGO:00820611.3ATP8B1, SLC10A1, SLCO1B1, SLC10A2, SLCO1B3, FABP6
2organic anion transportGO:01571111.2SLCO1B1, SLC10A1, SLC10A2, SLCO1B3, SLC22A6, SLCO1A2
3interferon-gamma-mediated signaling pathwayGO:06033311.1SOCS3, HLA-G, HLA-E, HLA-DRB1, HLA-DQB1, HLA-DQA1
4bile acid biosynthetic processGO:00669911.1ABCB11, CYP27A1, CYP7B1, CYP8B1, CYP7A1, AKR1D1
5very-low-density lipoprotein particle remodelingGO:03437211.0APOE, CETP, LCAT, LIPC, LPL
6drug transmembrane transportGO:00685510.8SLC22A2, SLC22A3, SLC22A1, ABCG2, ABCB1
7sodium-independent organic anion transportGO:04325210.7SLCO1B1, SLCO4A1, SLCO1B3, SLCO1C1, SLC22A6, SLCO1A2
8xenobiotic metabolic processGO:00680510.6CYP7B1, CYP17A1, CYP27A1, CYP3A5, CYP2J2, NR1I2
9release of cytochrome c from mitochondriaGO:00183610.6TP53, CCK, BAX, BCL2, CLU, MYC
10response to glucose stimulusGO:00974910.5ADIPOQ, HIF1A, SMAD2, NR1H4, NR0B2, HNF4A
11exogenous drug catabolic processGO:04273810.5NR1I2, CYP2C19, CYP2B6, CYP2A6, CYP3A4
12transcription initiation from RNA polymerase II promoterGO:00636710.4NR1I2, NR1I3, NR3C2, SMAD2, SMAD7, NOTCH2
13oxidation-reduction processGO:05511410.4G6PD, CYP2C19, CYP2B6, CYP3A4, CYP1B1, CYP1A1
14transportGO:00681010.3ABCC3, ABCG2, TTR, SLC51A, SLC10A2, SLC10A1
15organ regenerationGO:03110010.2AFP, SOCS3, AHSG, NR0B2, CCND1, MKI67
16negative regulation of macrophage derived foam cell differentiationGO:01074510.2ADIPOQ, NR1H2, PPARA, ITGAV, CETP
17cytokine-mediated signaling pathwayGO:01922110.2HLA-DRB1, HLA-E, HLA-G, STAT3, SOCS3, HLA-DQB1
18response to lipopolysaccharideGO:03249610.1SOCS3, TAC1, EDN1, NR1H4, ALPL, F2R
19response to estradiol stimulusGO:03235510.1SOCS3, STAT3, TGFB2, CTNNB1, ESR1, F3
20steroid metabolic processGO:00820210.1CYP3A5, CYP17A1, CYP2C19, CYP2B6, CYP2A6, CYP3A4
21acute-phase responseGO:0069539.9STAT3, AHSG, F2, IL6, ASS1, SERPINA1
22positive regulation of cell migrationGO:0303359.9ABCC1, EDN1, ONECUT1, F2RL1, F2R, F3
23cell surface receptor signaling pathwayGO:0071669.7PRLR, EDN1, TNFRSF10B, CABIN1, F2, IFNA2
24bile acid and bile salt transportGO:0157219.7ATP8B1, FABP6, ALB, ABCB11, ABCC3, SLC51A
25response to ethanolGO:0454719.6ADIPOQ, STAT3, RXRA, GOT2, CCND1, AVP
26response to hypoxiaGO:0016669.4TGFB2, DPP4, SOCS3, ADIPOQ, EPAS1, HIF1A
27response to glucocorticoid stimulusGO:0513849.4TNF, RXRA, ABCB4, SOCS3, ADIPOQ, HSD11B2
28response to drugGO:0424939.3CTNNB1, EDN1, ABCB1, ABCB4, ABCC1, ABCG2
29positive regulation of cell proliferationGO:0082849.0F2, F2R, GLP1R, EDN1, TGFB2, DPP4
30negative regulation of apoptotic processGO:0430668.8GLP1R, HNF1B, TP53, TNF, TGFB2, PRKAA2
31positive regulation of transcription from RNA polymerase II promoterGO:0459448.1SMAD2, NR1H4, NR1H2, PPARA, CTNNB1, SMAD7
32cholesterol metabolic processGO:008203INFRXRA, NR0B2, CYP27A1, CYP7B1, APOE,
33lipoprotein metabolic processGO:042157INFPPARA, ALB, APOE, , CETP, LCAT
34triglyceride homeostasisGO:070328INFHNF4A, , CETP, LIPC, LPL
35high-density lipoprotein particle remodelingGO:034375INFAPOE, , CETP, LCAT, LIPC
36cellular lipid metabolic processGO:044255INFHADHA, PRKAA2, ABCB4, RXRA, NR1H2, PPARA
37platelet activationGO:030168INFF2, F2R, ALB, ABCC4, TGFB2, F5
38platelet degranulationGO:002576INFF5, ALB, ABCC4, TGFB2, IGF1,
39transmembrane transportGO:055085INFAVP, ABCG2, SLC22A1, SLC22A3, SLC22A8, SLCO1A2
40lipid metabolic processGO:006629INFHNF4A, CYP3A4, PPARA, ABCB4, G6PD, ALB
41reverse cholesterol transportGO:043691INFAPOE, , CETP, LCAT, CLU, LIPC
42small molecule metabolic processGO:044281INFNCOA6, GLP1R, AKR1D1, CYP7A1, CYP1A1, CYP1B1
43blood coagulationGO:007596INFF2, F2R, F2RL1, ALB, HNF4A, TP53

Molecular functions related to cholestasis according to GeneDecks:

(show all 21)
idNameGO IDScoreTop Affiliating Genes
1organic anion transmembrane transporter activityGO:00851411.0SLCO1B3, SLC22A6, SLCO1A2, SLC22A8, ABCC3, ABCC2
2ATPase activity, coupled to transmembrane movement of substancesGO:04262610.9ABCG2, ABCD4, ABCC4, ABCC3, ABCC2, ABCC1
3xenobiotic-transporting ATPase activityGO:00855910.8ABCG2, ABCC1, ABCB4, ABCB1
4steroid hormone receptor activityGO:00370710.6RXRA, NR3C2, NR1I2, NR1H4, NR1H2, NR0B2
5ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activityGO:00487910.5STAT3, RXRA, NR1I3, NR1I2, NR1H4, NR1H2
6steroid bindingGO:00549610.5NR3C2, CYP3A4, ESR2, ESR1, AKR1D1, HSD11B2
7aromatase activityGO:07033010.4CYP2J2, CYP3A5, CYP4X1, CYP3A43, CYP1B1, CYP1A1
8heme bindingGO:02003710.4MPO, ABCB6, CYP2J2, CYP3A5, CYP27A1, CYP17A1
9iron ion bindingGO:00550610.3CYP7B1, CYP4X1, CYP17A1, CYP27A1, CYP3A5, CYP2J2
10electron carrier activityGO:00905510.3CYP7B1, CYP4X1, CYP17A1, CYP27A1, CYP3A5, CYP2J2
11oxygen bindingGO:01982510.3CYP3A5, CYP17A1, CYP8B1, CYP2C19, CYP3A4, CYP1B1
12monooxygenase activityGO:00449710.1CYP3A5, CYP2C19, CYP2B6, CYP3A43, CYP3A4, CYP1B1
13oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprGO:01671210.0CYP2B6, CYP2A6, CYP3A4, CYP1B1
14sequence-specific DNA bindingGO:0435659.8NR1I2, NR1I3, NR3C2, RXRA, NFE2L2, HIF1A
15receptor bindingGO:0051029.7HNF4A, HLA-B, HLA-G, CRH, TGFB2, DPP4
16hormone activityGO:0051799.6HAMP, ADIPOQ, POMC, TTR, EDN1, CRH
17protease bindingGO:0020209.4DPP4, TNF, TP53, F3, BCL2, SERPINA1
18protein homodimerization activityGO:0428039.0NR0B2, SHBG, ABCG2, G6PD, TGFB2, DPP4
19protein heterodimerization activityGO:0469828.7RXRA, HIF1A, TGFB2, SLC51A, SLC51B, EPAS1
20protein bindingGO:005515INFNR1H2, NR1H4, NR1I2, NR3C2, SMAD2, SMAD7
21enzyme bindingGO:019899INFCYP2A6, CYP2C19, CTNNB1, RXRA, ACIN1, HIF1A

Sources for Cholestasis

2CDC
11FMA
18HMDB
19ICD9CM
20KEGG
24MeSH
25MGI
27NCIt
28NDF-RT
31NINDS
32Novoseek
33OMIM
35PubMed
36QIAGEN
43UMLS