NICCD
MCID: CTR077
MIFTS: 25

Citrullinemia, Type Ii, Neonatal-Onset (NICCD) malady

Categories: Genetic diseases, Rare diseases, Metabolic diseases

Aliases & Classifications for Citrullinemia, Type Ii, Neonatal-Onset

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Aliases & Descriptions for Citrullinemia, Type Ii, Neonatal-Onset:

Name: Citrullinemia, Type Ii, Neonatal-Onset 52 12 68
Niccd 48 24 54 70
Neonatal Intrahepatic Cholestasis Caused by Citrin Deficiency 48 24 54
Citrin Deficiency 48 70 68
Cholestasis, Neonatal Intrahepatic, Caused by Citrin Deficiency 70 27
 
Neonatal-Onset Citrullinemia Type Ii 48 70
Neonatal-Onset Citrullinemia Type 2 48 70
Neonatal Intrahepatic Cholestasis Due to Citrin Deficiency 54
Adult-Onset Citrullinemia Type 2 68

Characteristics:

Orphanet epidemiological data:

54
niccd:
Inheritance: Autosomal recessive; Age of onset: Infancy,Neonatal

HPO:

64
citrullinemia, type ii, neonatal-onset:
Inheritance: autosomal recessive inheritance

Classifications:



External Ids:

OMIM52 605814
Orphanet54 ORPHA247598
ICD10 via Orphanet31 E72.2
MedGen37 C1853942
MeSH39 D002780

Summaries for Citrullinemia, Type Ii, Neonatal-Onset

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NIH Rare Diseases:48 Neonatal intrahepatic cholestasis caused by citrin deficiency (niccd) is a liver condition is also known as neonatal-onset type ii citrullinemia. niccd blocks the flow of bile (a digestive fluid produced by the liver) and prevents the body from processing certain nutrients properly. this leads to transient intrahepatic cholestasis and variable liver dysfunction in children younger than one year of age. niccd is generally not severe, and symptoms disappear by age one year with appropriate treatment. years or even decades later, however, some of these individuals develop the characteristic features of adult-onset type ii citrullinemia. niccd is caused by mutations in the slc25a13 gene. this condition is inherited in an autosomal recessive pattern. last updated: 7/11/2011

MalaCards based summary: Citrullinemia, Type Ii, Neonatal-Onset, also known as NICCD, is related to failure to thrive and dyslipidemia caused by citrin deficiency and citrullinemia, adult-onset type ii, and has symptoms including reduced consciousness/confusion, cirrhosis and intrahepatic cholestasis. An important gene associated with Citrullinemia, Type Ii, Neonatal-Onset is SLC25A13 (Solute Carrier Family 25 Member 13). Affiliated tissues include liver.

OMIM:52 Neonatal intrahepatic cholestasis caused by citrin deficiency (NICCD) is an autosomal recessive metabolic disorder... (605814) more...

UniProtKB/Swiss-Prot:70 Cholestasis, neonatal intrahepatic, caused by citrin deficiency: A form of citrullinemia type 2 with neonatal onset, characterized by suppression of the bile flow, hepatic fibrosis, low birth weight, growth retardation, hypoproteinemia, variable liver dysfunction. Neonatal intrahepatic cholestasis due to citrin deficiency is generally not severe and symptoms disappear by one year of age with an appropriate diet. Years or even decades later, however, some individuals develop the characteristic features of citrullinemia type 2 with neuropsychiatric symptoms.

Related Diseases for Citrullinemia, Type Ii, Neonatal-Onset

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Diseases in the Citrullinemia, Type Ii, Neonatal-Onset family:

Acute Neonatal Citrullinemia Type I

Diseases related to Citrullinemia, Type Ii, Neonatal-Onset via text searches within MalaCards or GeneCards Suite gene sharing:

idRelated DiseaseScoreTop Affiliating Genes
1failure to thrive and dyslipidemia caused by citrin deficiency12.0
2citrullinemia, adult-onset type ii11.3
3cholestasis10.8
4intrahepatic cholestasis10.8
5hepatitis10.2
6liver disease10.1

Graphical network of diseases related to Citrullinemia, Type Ii, Neonatal-Onset:



Diseases related to citrullinemia, type ii, neonatal-onset

Symptoms & Phenotypes for Citrullinemia, Type Ii, Neonatal-Onset

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Symptoms by clinical synopsis from OMIM:

605814

Clinical features from OMIM:

605814

Human phenotypes related to Citrullinemia, Type Ii, Neonatal-Onset:

 64 (show all 10)
id Description HPO Frequency HPO Source Accession
1 cirrhosis64 HP:0001394
2 intrahepatic cholestasis64 HP:0001406
3 failure to thrive64 HP:0001508
4 growth delay64 HP:0001510
5 hypertriglyceridemia64 HP:0002155
6 hyperbilirubinemia64 HP:0002904
7 hypercholesterolemia64 HP:0003124
8 hypoalphalipoproteinemia64 HP:0003233
9 hypermethioninemia64 HP:0003235
10 elevated plasma citrulline64 HP:0011966

UMLS symptoms related to Citrullinemia, Type Ii, Neonatal-Onset:


reduced consciousness/confusion

Drugs & Therapeutics for Citrullinemia, Type Ii, Neonatal-Onset

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Interventional clinical trials:

Search ClinicalTrials, NIH Clinical Center for Citrullinemia, Type Ii, Neonatal-Onset

Genetic Tests for Citrullinemia, Type Ii, Neonatal-Onset

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Genetic tests related to Citrullinemia, Type Ii, Neonatal-Onset:

id Genetic test Affiliating Genes
1 Neonatal Intrahepatic Cholestasis Caused by Citrin Deficiency27 24

Anatomical Context for Citrullinemia, Type Ii, Neonatal-Onset

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MalaCards organs/tissues related to Citrullinemia, Type Ii, Neonatal-Onset:

36
Liver

Publications for Citrullinemia, Type Ii, Neonatal-Onset

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Variations for Citrullinemia, Type Ii, Neonatal-Onset

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UniProtKB/Swiss-Prot genetic disease variations for Citrullinemia, Type Ii, Neonatal-Onset:

70
id Symbol AA change Variation ID SNP ID
1SLC25A13p.Glu601LysVAR_016601rs80338727

Clinvar genetic disease variations for Citrullinemia, Type Ii, Neonatal-Onset:

5 (show all 17)
id Gene Variation Type Significance SNP ID Assembly Location
1SLC25A13NM_ 014251.2(SLC25A13): c.1078C> T (p.Arg360Ter)SNVPathogenicrs80338721GRCh37Chr 7, 95813688: 95813688
2SLC25A13NM_ 014251.2(SLC25A13): c.1592G> A (p.Gly531Asp)SNVPathogenicrs80338724GRCh37Chr 7, 95751309: 95751309
3SLC25A13NM_ 014251.2(SLC25A13): c.15G> A (p.Lys5=)SNVPathogenicrs80338715GRCh37Chr 7, 95951254: 95951254
4SLC25A13NM_ 014251.2(SLC25A13): c.1750_ 1751[insNM_ 138459.3: 2672_ 24;1750+72_ 1751-4dup]insertionPathogenic
5SLC25A13NM_ 014251.2(SLC25A13): c.1801G> A (p.Glu601Lys)SNVPathogenicrs80338727GRCh37Chr 7, 95751007: 95751007
6SLC25A13NM_ 014251.2(SLC25A13): c.1801G> T (p.Glu601Ter)SNVPathogenicrs80338727GRCh37Chr 7, 95751007: 95751007
7SLC25A13NM_ 014251.2(SLC25A13): c.1813C> T (p.Arg605Ter)SNVPathogenicrs80338729GRCh37Chr 7, 95750995: 95750995
8SLC25A13NM_ 014251.2(SLC25A13): c.550C> T (p.Arg184Ter)SNVPathogenicrs80338716GRCh37Chr 7, 95822414: 95822414
9SLC25A13NM_ 014251.2(SLC25A13): c.615+1G> CSNVPathogenicrs80338718GRCh37Chr 7, 95822348: 95822348
10SLC25A13NM_ 014251.2(SLC25A13): c.615+5G> ASNVPathogenicrs80338717GRCh37Chr 7, 95822344: 95822344
11SLC25A13NM_ 014251.2(SLC25A13): c.852_ 855delTATG (p.Met285Profs)deletionPathogenicrs80338720GRCh37Chr 7, 95818684: 95818687
12SLC25A13NM_ 014251.2(SLC25A13): c.775C> T (p.Gln259Ter)SNVPathogenicrs746155190GRCh38Chr 7, 96189654: 96189654
13SLC25A13NM_ 014251.2(SLC25A13): c.1505C> T (p.Pro502Leu)SNVLikely pathogenicrs139149160GRCh38Chr 7, 96131829: 96131829
14SLC25A13NM_ 014251.2(SLC25A13): c.495delA (p.Ala166Profs)deletionPathogenicrs879255504GRCh38Chr 7, 96193157: 96193157
15SLC25A13NM_ 014251.2(SLC25A13): c.468+1G> CSNVLikely pathogenicrs1060499612GRCh37Chr 7, 95838149: 95838149
16SLC25A13NM_ 014251.2(SLC25A13): c.1177+1G> ASNVPathogenicrs80338722GRCh37Chr 7, 95813588: 95813588
17SLC25A13NM_ 014251.2(SLC25A13): c.1799dupA (p.Tyr600Terfs)duplicationPathogenicrs80338726GRCh37Chr 7, 95751009: 95751009

Expression for genes affiliated with Citrullinemia, Type Ii, Neonatal-Onset

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Search GEO for disease gene expression data for Citrullinemia, Type Ii, Neonatal-Onset.

Pathways for genes affiliated with Citrullinemia, Type Ii, Neonatal-Onset

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GO Terms for genes affiliated with Citrullinemia, Type Ii, Neonatal-Onset

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Sources for Citrullinemia, Type Ii, Neonatal-Onset

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2CDC
6CNVD
10DGIdb
15ExPASy
16FDA
17FMA
27GTR
28HGMD
29HMDB
30ICD10
31ICD10 via Orphanet
32ICD9CM
33IUPHAR
34KEGG
37MedGen
39MeSH
40MESH via Orphanet
41MGI
44NCI
45NCIt
46NDF-RT
49NINDS
50Novoseek
52OMIM
53OMIM via Orphanet
57PubMed
58QIAGEN
63SNOMED-CT via Orphanet
67Tumor Gene Family of Databases
68UMLS
69UMLS via Orphanet