Sources: 12Gene Ontology See all sources |
Cellular components related to colon carcinoma according to GeneDecks: (show all 12)
| id | Name | GO ID | Score | Top Affiliating Genes | | 1 | nucleus | GO:005634 | 29.1 | ZNF146, PIK3CB, PIAS1, KLF5, NCL, PDCD4 | | 2 | cytoplasm | GO:005737 | 27.7 | ZNF146, PIK3CG, PDCD4, KIT, KITLG, PCSK9 | | 3 | cytosol | GO:005829 | 26.4 | PIK3CB, PIK3CA, PIK3R2, PIK3R1, PIK3CG, PDCD4 | | 4 | plasma membrane | GO:005886 | 26.2 | PIK3R1, PIK3CG, KL, NCAM1, KIT, KITLG | | 5 | integral to plasma membrane | GO:005887 | 19.4 | KL, KIR3DS1, SELL, SELP, SELPLG, LPAR1 | | 6 | nucleoplasm | GO:005654 | 17.3 | PIAS1, BRCA1, VDR, BNIP3, MYC, RARA | | 7 | extracellular region | GO:005576 | 16.9 | KL, NCAM1, RETNLB, KITLG, VTN, SERPINF1 | | 8 | cell surface | GO:009986 | 15.5 | NCAM1, PCSK9, VEGFA, LPAR1, LPAR2, VCAM1 | | 9 | extracellular space | GO:005615 | 15.1 | KL, KIT, KITLG, VTN, PCSK9, GCNT1 | | 10 | external side of plasma membrane | GO:009897 | 12.3 | NCAM1, KIT, SELL, SELP, VCAM1, KDR | | 11 | membrane raft | GO:045121 | 12.2 | BTK, SELE, LCK, FURIN, JAK2, CD14 | | 12 | platelet alpha granule lumen | GO:031093 | 11.0 | SERPINE1, VEGFA, FN1, FIGF, APP, IGF1 |
Biological processes related to colon carcinoma according to GeneDecks: (show top 50)
(show all 67)
| id | Name | GO ID | Score | Top Affiliating Genes | | 1 | signal transduction | GO:007165 | 18.7 | PIK3CB, PDE1A, KIT, KITLG, VDR, RARA | | 2 | small molecule metabolic process | GO:044281 | 18.0 | PIK3CB, PIK3CA, PIK3R2, PIK3R1, PIK3CG, VCAN | | 3 | apoptotic process | GO:006915 | 17.9 | PDCD4, PCSK9, BTK, SEPT4, BRCA1, BNIP3 | | 4 | blood coagulation | GO:007596 | 17.5 | PIK3CB, PIK3CA, PIK3R2, PIK3R1, PIK3CG, PDE1A | | 5 | positive regulation of cell proliferation | GO:008284 | 16.4 | KLF5, KIT, VIP, VEGFA, MYC, RARA | | 6 | response to drug | GO:042493 | 16.4 | MYC, BCL2, LGALS1, MVP, LCK, BAG1 | | 7 | cell adhesion | GO:007155 | 16.1 | NCAM1, KITLG, VTN, SELL, SELP, SELPLG | | 8 | virus-host interaction | GO:019048 | 16.0 | PIK3R1, VCAM1, BNIP3, USP7, CLDN1, KDR | | 9 | cell proliferation | GO:008283 | 15.1 | RETNLB, KITLG, SERPINF1, RAF1, BLZF1, BCAR1 | | 10 | positive regulation of transcription from RNA polymerase II promoter | GO:045944 | 15.0 | KLF4, SERPINE1, BRCA1, VEGFA, VDR, MYC | | 11 | negative regulation of transcription from RNA polymerase II promoter | GO:000122 | 14.8 | KLF4, RBBP8, VDR, MYC, MYB, BMP2 | | 12 | nerve growth factor receptor signaling pathway | GO:048011 | 14.5 | PIK3CB, PIK3CA, PIK3R2, PIK3R1, PDE1A, BRAF | | 13 | angiogenesis | GO:001525 | 14.2 | PIK3CA, PIK3CG, KLF5, NCL, SERPINE1, VEGFA | | 14 | epidermal growth factor receptor signaling pathway | GO:007173 | 14.1 | PIK3CA, PIK3R1, PDE1A, RAF1, BCAR1, BAD | | 15 | protein phosphorylation | GO:006468 | 14.0 | BTK, BRAF, RARA, RAF1, BIRC5, PAK1 | | 16 | leukocyte migration | GO:050900 | 14.0 | PIK3CB, PIK3CA, PIK3R2, PIK3R1, SELL, SELP | | 17 | negative regulation of cell proliferation | GO:008285 | 14.0 | KLF4, VDR, BMP2, BMP5, RARB, RAF1 | | 18 | negative regulation of apoptotic process | GO:043066 | 13.8 | PIK3CG, SERPINE1, BRAF, VEGFA, MYC, BMP5 | | 19 | positive regulation of transcription, DNA-dependent | GO:045893 | 13.7 | PIAS1, KLF4, KLF5, BRCA1, MYC, MYB | | 20 | platelet activation | GO:030168 | 13.7 | PIK3CB, PIK3CA, PIK3R2, PIK3R1, PIK3CG, SELP | | 21 | positive regulation of cell migration | GO:030335 | 13.6 | VEGFA, BMP2, KDR, BCAR1, FURIN, JAK2 | | 22 | induction of apoptosis by intracellular signals | GO:008629 | 13.4 | BNIP3, MYC, BID, BCL2, BCL2L1, BCL2L11 | | 23 | fibroblast growth factor receptor signaling pathway | GO:008543 | 13.4 | PIK3CA, PIK3R1, KL, PDE1A, BRAF, RAF1 | | 24 | response to organic cyclic compound | GO:014070 | 13.2 | SELP, MSH2, JUN, JUNB, CDKN1A, CDK1 | | 25 | transforming growth factor beta receptor signaling pathway | GO:007179 | 13.2 | SERPINE1, MYC, PARP1, FURIN, FUT8, JUN | | 26 | innate immune response | GO:045087 | 13.2 | PIK3CG, BTK, BCL2, BCL2L1, LGALS3, LCN2 | | 27 | anti-apoptosis | GO:006916 | 13.1 | PIK3CA, BRAF, BNIP3, BIRC3, BIRC5, BCL2 | | 28 | cell migration | GO:016477 | 12.9 | PIK3CB, BCAR1, CEACAM1, FUT8, JUP, CDK1 | | 29 | aging | GO:007568 | 12.8 | KL, SERPINF1, VDR, VCAM1, P2RY2, FURIN | | 30 | chemotaxis | GO:006935 | 12.6 | PIK3CB, FOSL1, FGF2, FER, IL4, MAPK14 | | 31 | activation of cysteine-type endopeptidase activity involved in apoptotic process | GO:006919 | 12.5 | MYC, BCL2L11, LCK, BAD, BAX, JAK2 | | 32 | integrin-mediated signaling pathway | GO:007229 | 12.5 | BCAR1, CEACAM1, FUT8, ITGA1, ITGA2, ITGA3 | | 33 | activation of pro-apoptotic gene products | GO:008633 | 12.4 | MYC, BID, BCL2, BCL2L11, BAD, BAX | | 34 | response to hypoxia | GO:001666 | 12.3 | VEGFA, VCAM1, BNIP3, BMP2, RAF1, PAK1 | | 35 | response to estradiol stimulus | GO:032355 | 12.2 | VDR, RARA, BID, MMP9, ASS1, IL1B | | 36 | immune response | GO:006955 | 12.2 | KIR3DS1, VTN, BMP6, ZEB1, MR1, CD86 | | 37 | activation of MAPK activity | GO:000187 | 12.0 | PIK3CB, KIT, LPAR1, LPAR2, CDK1, ITGA1 | | 38 | cellular response to mechanical stimulus | GO:071260 | 12.0 | BNIP3, CHEK1, BAD, ITGB1, IL13, IL18 | | 39 | positive regulation of protein phosphorylation | GO:001934 | 11.7 | VEGFA, BMP2, IL1B, ENG, MAPK3, CCND2 | | 40 | positive regulation of apoptotic process | GO:043065 | 11.6 | SEPT4, LPAR1, BMP2, RARB, BID, BCL2L11 | | 41 | inflammatory response | GO:006954 | 11.5 | PIK3CG, KIT, SELE, SELP, BMP2, BMP6 | | 42 | response to mechanical stimulus | GO:009612 | 11.5 | BMP2, JUN, JUNB, MMP9, FOSL1, ANGPT2 | | 43 | platelet degranulation | GO:002576 | 11.5 | SELP, SERPINE1, VEGFA, CD63, CD9, FN1 | | 44 | cell-cell signaling | GO:007267 | 11.4 | BMP2, CEACAM6, CD86, CD80, ITGB2, INS | | 45 | MAPK cascade | GO:000165 | 11.4 | MYC, RAF1, PAK1, CDK1, INS, FGFR1 | | 46 | wound healing | GO:042060 | 11.4 | RAF1, PAK1, SDC2, P2RY2, INS, FGF2 | | 47 | activation of MAPKK activity | GO:000186 | 11.1 | RAF1, JAK2, MAP2K2, F2R, NRAS, PLCG1 | | 48 | positive regulation of peptidyl-tyrosine phosphorylation | GO:050731 | 11.1 | KITLG, VTN, VEGFA, JAK2, CD4, CD80 | | 49 | positive regulation of phosphatidylinositol 3-kinase cascade | GO:014068 | 11.0 | KIT, SELP, KDR, JAK2, INS, FGFR1 | | 50 | positive regulation of MAPK cascade | GO:043410 | 10.4 | KIT, LPAR1, LPAR2, KDR, LEP, ITGB1 |
Molecular functions related to colon carcinoma according to GeneDecks: (show all 13)
| id | Name | GO ID | Score | Top Affiliating Genes | | 1 | protein binding | GO:005515 | 39.4 | FADD, IL1A, IL15, IL13RA1, IL13, IL12B | | 2 | ATP binding | GO:005524 | 19.1 | RNASEL, HSPD1, HSPA9, HSPA8, HSPA4, HSPH1 | | 3 | protein homodimerization activity | GO:042803 | 15.2 | SYNE1, PVRL2, TCF3, DPYD, DPP4, TGFB2 | | 4 | protein heterodimerization activity | GO:046982 | 14.3 | P4HB, BRAF, VEGFA, BNIP3, BAX, BAD | | 5 | protein kinase binding | GO:019901 | 14.1 | ADRA2A, EEF1A1, NPM1, PRKCE, STAT3, TCF7L2 | | 6 | receptor binding | GO:005102 | 13.8 | ITGB5, ITGB4, ITGB2, JAK2, RARA, BMP2 | | 7 | identical protein binding | GO:042802 | 12.9 | TP53, ERBB2, ESR1, AKT1, GLUD1, CASP8 | | 8 | enzyme binding | GO:019899 | 12.8 | CYP3A4, MST1R, MSH2, CFTR, YES1, BIRC5 | | 9 | protein tyrosine kinase activity | GO:004713 | 12.4 | EPHB2, MAP2K2, FER, MET, FGR, FGFR2 | | 10 | integrin binding | GO:005178 | 12.1 | ERBB2IP, CALR, ICAM3, ICAM2, SRC, COL3A1 | | 11 | growth factor activity | GO:008083 | 11.8 | CXCL12, CXCL1, TDGF1P3, TDGF1, TFF1, TGFB3 | | 12 | transcription regulatory region DNA binding | GO:044212 | 11.1 | NFKB1, NFATC2, NFATC1, SMAD4, PPARG, HIF1A | | 13 | cytokine activity | GO:005125 | 10.7 | IL15, IL13, IL12B, IL10, FGF2, BMP6 |
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