Sources: 12Gene Ontology See all sources |
Cellular components related to differentiating neuroblastoma according to GeneDecks:| id | Name | GO ID | Score | Top Affiliating Genes | | 1 | nuclear chromatin | GO:000790 | 9.9 | RXRA, TP53, KDM1A, RARA, SIRT1 | | 2 | cell surface | GO:009986 | 9.4 | ADAM17, TGFA, NRD1, NTRK1, TNF, HMGB1 | | 3 | nucleoplasm | GO:005654 | 8.7 | TP53, CREB1, RXRA, RPS27A, COIL, TFDP1 | | 4 | extracellular space | GO:005615 | 6.6 | NGF, LTA, THBS1, TGFA, SOD1, KNG1 | | 5 | cytoplasm | GO:005737 | 6.1 | ACP1, KRT20, NOS1, SNCA, TP53, HMGB1 | | 6 | extracellular region | GO:005576 | 5.7 | VTN, NGF, NGRN, PDYN, HCRT, AGER | | 7 | cytosol | GO:005829 | 5.5 | NRD1, SNCA, NOS1, RPS27A, SHC3, TH | | 8 | nucleus | GO:005634 | 5.5 | NGRN, COIL, RXRA, CREB1, SNCA, SRC |
Biological processes related to differentiating neuroblastoma according to GeneDecks: (show top 50)
(show all 62)
| id | Name | GO ID | Score | Top Affiliating Genes | | 1 | activation of MAPKK activity | GO:000186 | 10.6 | MAP3K13, NTRK1 | | 2 | regulation of transcription from RNA polymerase II promoter | GO:006357 | 10.3 | SOD2, STAT5A, TFDP1, HMGB1, IKBKAP, FOS | | 3 | positive regulation of cell migration | GO:030335 | 10.2 | ADAM17, LYN, THBS1, IKBKAP, BCAR1, BMP2 | | 4 | transmembrane receptor protein tyrosine kinase signaling pathway | GO:007169 | 10.0 | RET, NTRK1, NGF, SHC3, LYN | | 5 | T cell differentiation in thymus | GO:033077 | 10.0 | BCL2, TP53, STAT5A, ADAM17 | | 6 | phosphatidylinositol-mediated signaling | GO:048015 | 9.9 | NGF, CREB1, NTRK1, AKT1, IGF1, FOXO3 | | 7 | MAPK cascade | GO:000165 | 9.9 | POU4F2, TGFA, TNF, HRAS, MAPK1, RET | | 8 | positive regulation of mitosis | GO:045840 | 9.8 | TGFA, DRD3, TNF, IGF1, IGF2 | | 9 | JAK-STAT cascade involved in growth hormone signaling pathway | GO:060397 | 9.8 | ADAM17, LYN, PRL, STAT5A, MAPK1 | | 10 | response to ethanol | GO:045471 | 9.7 | SOD1, STAT5A, TH, RXRA, DRD3, BCL2 | | 11 | positive regulation of protein kinase B signaling cascade | GO:051897 | 9.7 | THBS1, TNF, IGF1, IGF2, IGFBP5 | | 12 | insulin receptor signaling pathway | GO:008286 | 9.7 | SHC3, AKT1, HRAS, IGF2, MAPK1, BCAR1 | | 13 | response to hypoxia | GO:001666 | 9.5 | ADAM17, THBS1, TH, LTA, NOS1, TNF | | 14 | positive regulation of protein phosphorylation | GO:001934 | 9.5 | ADAM17, SIRT1, TNF, AKT1, HRAS, IGF2 | | 15 | activation of MAPK activity | GO:000187 | 9.5 | SOD1, TGFA, THBS1, RPS27A, TNF, MAPK1 | | 16 | negative regulation of neuron apoptotic process | GO:043524 | 9.4 | SOD2, SOD1, TGFA, NGF, SNCA, NTRK1 | | 17 | positive regulation of neuron differentiation | GO:045666 | 9.4 | EPO, IFNG, ASCL1, BDNF, BMP2 | | 18 | neuron apoptotic process | GO:051402 | 9.4 | TP53, APP, CDK5, ATM, BCL2 | | 19 | protein import into nucleus, translocation | GO:000060 | 9.4 | IFNG, AKT1, TP53, TNF | | 20 | protein autophosphorylation | GO:046777 | 9.3 | LYN, NTRK1, AKT1, MAP3K10, MAP3K13, CDK5 | | 21 | platelet degranulation | GO:002576 | 9.3 | KNG1, LYN, SOD1, THBS1, IGF1, APP | | 22 | fibroblast growth factor receptor signaling pathway | GO:008543 | 9.2 | ADCY1, RPS27A, CREB1, SRC, AKT1, HRAS | | 23 | negative regulation of transcription from RNA polymerase II promoter | GO:000122 | 9.2 | SIRT1, POU4F2, RPS27A, RXRA, DRD3, TNF | | 24 | synaptic transmission | GO:007268 | 9.2 | ADCY1, HCRTR1, HCRT, ACP1, PDYN, CREB1 | | 25 | regulation of multicellular organism growth | GO:040014 | 9.1 | SOD1, PRL, STAT5A, DRD3, IGF1, APP | | 26 | cell aging | GO:007569 | 9.1 | SIRT1, SOD1, TP53, BCL2 | | 27 | positive regulation of peptidyl-serine phosphorylation | GO:033138 | 9.1 | SNCA, TNF, AKT1, IL6, BCL2 | | 28 | peptidyl-serine phosphorylation | GO:018105 | 9.0 | EPO, AKT1, MAPK1, MAP3K10, CDK5, ATM | | 29 | positive regulation of apoptotic process | GO:043065 | 9.0 | ADCY10, KNG1, SIRT1, SOD1, RXRA, TNF | | 30 | epidermal growth factor receptor signaling pathway | GO:007173 | 9.0 | ADAM17, ADCY1, TGFA, SHC3, RPS27A, CREB1 | | 31 | positive regulation of NF-kappaB transcription factor activity | GO:051092 | 9.0 | AGER, RPS27A, NTRK1, TNF, MAP3K13, IL6 | | 32 | Ras protein signal transduction | GO:007265 | 9.0 | SHC3, NGF, NTRK1, SRC, TP53, HRAS | | 33 | nerve growth factor receptor signaling pathway | GO:048011 | 9.0 | ADAM17, ADCY1, SHC3, NGF, RPS27A, CREB1 | | 34 | neuron projection development | GO:031175 | 8.9 | LYN, AGER, NGF, HMGB1, APP, IL6 | | 35 | humoral immune response | GO:006959 | 8.9 | LTA, TNF, IFNG, IL6, BCL2 | | 36 | positive regulation of MAPK cascade | GO:043410 | 8.7 | DUSP19, HRAS, IGF1, IGF2, IL6 | | 37 | cell proliferation | GO:008283 | 8.7 | PRL, TFDP1, TGFA, NRD1, TP53, AKT1 | | 38 | inflammatory response | GO:006954 | 8.7 | KNG1, AGER, NGF, RXRA, TNF, AKT1 | | 39 | regulation of apoptotic process | GO:042981 | 8.6 | SIRT1, LYN, RPS27A, CREB1, TP53, IL6 | | 40 | positive regulation of cell proliferation | GO:008284 | 8.3 | LYN, SIRT1, ADAM17, EPO, NGF, DRD3 | | 41 | response to drug | GO:042493 | 8.3 | THBS1, TGFA, SOD1, LYN, ADCY1, ADAM17 | | 42 | anti-apoptosis | GO:006916 | 8.3 | NGF, THBS1, TGFA, SOD1, ADAM17, EPO | | 43 | negative regulation of cell proliferation | GO:008285 | 8.2 | LYN, SOD2, RXRA, NTRK1, TNF, TP53 | | 44 | negative regulation of apoptotic process | GO:043066 | 8.1 | TNF, THBS1, SOD2, SIRT1, EPO, TP53 | | 45 | apoptotic process | GO:006915 | 8.0 | EPO, TFPT, KRT20, NGF, RPS27A, TNF | | 46 | positive regulation of transcription, DNA-dependent | GO:045893 | 7.9 | EPO, CREB1, TNF, RET, BMP2, RARA | | 47 | signal transduction | GO:007165 | 7.7 | SRC, CREB1, LTA, LYN, ADCY1, EPO | | 48 | platelet activation | GO:030168 | 7.3 | KNG1, LYN, SOD1, THBS1, SRC, AKT1 | | 49 | positive regulation of transcription from RNA polymerase II promoter | GO:045944 | 7.2 | MYCN, TNF, DRD3, CREB1, NOS1, RXRA | | 50 | blood coagulation | GO:007596 | 6.8 | TP53, SRC, NOS1, THBS1, SOD1, LYN |
Molecular functions related to differentiating neuroblastoma according to GeneDecks:| id | Name | GO ID | Score | Top Affiliating Genes | | 1 | integrin binding | GO:005178 | 8.8 | ADAM17, LYN, THBS1, SRC, IGF1, VTN | | 2 | growth factor activity | GO:008083 | 8.7 | NGF, IGF1, IGF2, IL6, BDNF, BMP2 | | 3 | identical protein binding | GO:042802 | 8.4 | EPOR, SIRT1, SYP, THBS1, COIL, SNCA | | 4 | protein binding | GO:005515 | 2.3 | EPOR, COIL, RXRA, NOS1, CREB1, SNCA |
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