Sources: 12Gene Ontology See all sources |
Cellular components related to ductal carcinoma in situ according to GeneDecks: (show all 13)
| id | Name | GO ID | Score | Top Affiliating Genes | | 1 | nuclear chromatin | GO:000790 | 10.1 | RARA, PAX6, MUC1, MSH6, AR, TP53 | | 2 | mitochondrial outer membrane | GO:005741 | 9.6 | PPP2R2B, IFI27, BAX, BCL2L1, BCL2, BNIP3L | | 3 | protein complex | GO:043234 | 9.5 | MDM2, TP53, PTGS2, SYP, PSEN2, MEF2C | | 4 | platelet alpha granule lumen | GO:031093 | 8.9 | TGFB1, THBS1, EGF, SPARC, VEGFA, SERPINE1 | | 5 | nucleolus | GO:005730 | 8.5 | ERBB4, TP53, TP63, TERT, PTHLH, COPS5 | | 6 | cell surface | GO:009986 | 8.1 | PLAU, PLAUR, ABCB1, TIMP2, TGFB1, CXCR4 | | 7 | nucleoplasm | GO:005654 | 7.6 | AKT1, ESR1, ESR2, ERBB4, TP53, TP63 | | 8 | extracellular space | GO:005615 | 6.8 | CTSD, SPARC, PTHLH, ERBB3, HSPD1, PLAU | | 9 | cytosol | GO:005829 | 6.7 | KRT5, SRC, CYP19A1, PTK2, PTEN, TP53 | | 10 | extracellular region | GO:005576 | 6.7 | ESR2, ERBB4, PTHLH, SPARC, CTSD, PLAU | | 11 | plasma membrane | GO:005886 | 5.1 | PTEN, TNK2, ERBB2, ERBB4, ERBB3, ESR1 | | 12 | nucleus | GO:005634 | 4.3 | ERBB4, ERBB2, TP53, TP63, TNK2, PTEN | | 13 | cytoplasm | GO:005737 | 4.2 | PGR, PTGS2, PTEN, TERT, TNK2, TP63 |
Biological processes related to ductal carcinoma in situ according to GeneDecks: (show top 50)
(show all 90)
| id | Name | GO ID | Score | Top Affiliating Genes | | 1 | negative regulation of survival gene product expression | GO:008634 | 10.5 | BNIP3L, BAX, BCL2L1, BNIP3 | | 2 | negative regulation of focal adhesion assembly | GO:051895 | 10.4 | THBS1, PTEN, APOD, SRC | | 3 | replicative senescence | GO:090399 | 10.4 | TP53, MME, CDKN2A, CDKN1A, TERT | | 4 | response to estrogen stimulus | GO:043627 | 10.4 | ESR1, SERPINE1, BRCA1, BCL2, CD24, CCND1 | | 5 | response to cytokine stimulus | GO:034097 | 10.3 | SPARC, STAT1, TIMP4, PTGS2, BCL2L1, BCL2 | | 6 | regulation of mitochondrial membrane permeability | GO:046902 | 10.3 | BNIP3, BCL2L1, TP53, BCL2 | | 7 | response to ethanol | GO:045471 | 10.2 | ACTC1, SPARC, CCND1, BCL2, MMP9, GSN | | 8 | induction of apoptosis by intracellular signals | GO:008629 | 10.2 | BNIP3, BCL2, BCL2L1, AKT1, BAX, MSH6 | | 9 | extracellular matrix disassembly | GO:022617 | 10.2 | MMP9, MMP14, ENG, TIMP2, MMP13 | | 10 | neuron apoptotic process | GO:051402 | 10.2 | TP63, TP53, ERBB3, BAX, BCL2, RB1 | | 11 | response to reactive oxygen species | GO:000302 | 10.1 | APOD, SERPINE1, GSTP1, S100A7 | | 12 | G1 phase of mitotic cell cycle | GO:000080 | 10.1 | CDKN1A, CDKN2A, E2F1, CCND1, CDKN1B, RB1 | | 13 | DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator | GO:006978 | 10.1 | BRCA1, BRCA2, MUC1, TP53 | | 14 | Ras protein signal transduction | GO:007265 | 10.0 | RB1, CCNA2, RASSF1, CDKN1A, CDKN2A, SRC | | 15 | cellular response to hypoxia | GO:071456 | 9.9 | BNIP3, E2F1, HIF1A, PTGS2, TP53, MDM2 | | 16 | male gonad development | GO:008584 | 9.9 | SRD5A1, WT1, KIT, BCL2, BCL2L1, AR | | 17 | response to estradiol stimulus | GO:032355 | 9.9 | TGFB1, CYP19A1, PTGS2, ESR1, MMP9, TFF1 | | 18 | positive regulation of nitric oxide biosynthetic process | GO:045429 | 9.8 | ESR1, IFNG, PTGS2, EGFR, AKT1 | | 19 | phosphatidylinositol-mediated signaling | GO:048015 | 9.8 | GSN, PIK3CA, PCNA, PTEN, MDM2, ERBB2 | | 20 | heart development | GO:007507 | 9.8 | ERBB2, PCNA, MEF2C, FOXC1, ERBB3, ERBB4 | | 21 | regulation of cell proliferation | GO:042127 | 9.8 | PTK2, ERBB3, BRCA1, SPARC, ENG, SERPINE1 | | 22 | G1/S transition of mitotic cell cycle | GO:000082 | 9.8 | CCNB1, CDKN2A, CDKN1B, BCL2, RB1, E2F1 | | 23 | induction of apoptosis | GO:006917 | 9.6 | CDKN1B, TGFB1, BNIP3L, STAT1, THBS1, WT1 | | 24 | endothelial cell migration | GO:043542 | 9.5 | CDH13, PIK3CA, PTEN, PTK2, STAT1 | | 25 | anti-apoptosis | GO:006916 | 9.5 | THBS1, TERT, AKT1, GSTP1, MUC1, BCL2L1 | | 26 | negative regulation of epithelial cell proliferation | GO:050680 | 9.5 | AR, ESR2, MEF2C, TGFB1, PTEN, RB1 | | 27 | positive regulation of gene expression | GO:010628 | 9.5 | MEF2C, E2F1, PLAUR, CD44, PAX6, VEGFA | | 28 | positive regulation of peptidyl-serine phosphorylation | GO:033138 | 9.4 | VEGFA, BCL2, PIK3CA, CD44, AKT1, TGFB1 | | 29 | positive regulation of MAP kinase activity | GO:043406 | 9.3 | CD24, VEGFA, ERBB2, EGFR, TGFB1, EGF | | 30 | cell cycle arrest | GO:007050 | 9.2 | TP53, CDKN2A, CDKN1A, CDKN1B, IFNG, RASSF1 | | 31 | negative regulation of cell growth | GO:030308 | 9.2 | WT1, RB1, BCL2, CDKN1A, CDKN1B, ESR2 | | 32 | response to hypoxia | GO:001666 | 9.2 | PSEN2, BNIP3, BCL2, CD24, MMP9, VEGFA | | 33 | mammary gland alveolus development | GO:060749 | 9.2 | CCND1, ERBB4, EGF, AR | | 34 | virus-host interaction | GO:019048 | 9.2 | BNIP3, RB1, VIM, BNIP3L, BAX, CXCR4 | | 35 | positive regulation of protein phosphorylation | GO:001934 | 9.1 | AKT1, ENG, CCND1, ERBB4, ERBB2, PTK2 | | 36 | epidermal growth factor receptor signaling pathway | GO:007173 | 8.8 | ERBB2, AKT1, SRC, EGF, EGFR, TGFB1 | | 37 | angiogenesis | GO:001525 | 8.7 | FGFR2, PIK3CA, SERPINE1, VEGFA, S100A7, APOD | | 38 | cell proliferation | GO:008283 | 8.7 | AR, ERBB4, ERBB2, TP53, PTEN, E2F1 | | 39 | peptidyl-tyrosine phosphorylation | GO:018108 | 8.6 | KIT, FGFR2, ERBB4, PTK2, SRC, EGF | | 40 | positive regulation of cell migration | GO:030335 | 8.5 | VEGFA, CDH13, MMP14, EGFR, ERBB4, PTK2 | | 41 | platelet activation | GO:030168 | 8.5 | CSK, TGFB1, THBS1, PIK3CA, SERPINE1, VEGFA | | 42 | blood coagulation | GO:007596 | 8.3 | PTK2, CSK, TGFB1, THBS1, EGF, PIK3CA | | 43 | negative regulation of cell proliferation | GO:008285 | 8.1 | PTGS2, PTHLH, WT1, TIMP2, TP53, IGFBP3 | | 44 | positive regulation of transcription, DNA-dependent | GO:045893 | 7.9 | BRCA2, BRCA1, TP53, TP63, EGF, HIF1A | | 45 | negative regulation of apoptotic process | GO:043066 | 7.9 | EGFR, VEGFA, THBS1, SERPINE1, CD44, AR | | 46 | response to drug | GO:042493 | 7.9 | CYP19A1, PTGS2, ERBB4, ERBB3, IFNG, BCL2 | | 47 | positive regulation of transcription from RNA polymerase II promoter | GO:045944 | 7.9 | BRCA1, SERPINE1, RB1, CDKN2A, TP53, VEGFA | | 48 | signal transduction | GO:007165 | 7.8 | ERBB3, ESR2, ESR1, AKT1, AR, S100A9 | | 49 | apoptotic process | GO:006915 | 7.7 | TP53, ERBB4, AKT1, IFNG, E2F1, FGFR2 | | 50 | positive regulation of cell proliferation | GO:008284 | 7.0 | VEGFA, BIRC5, EGFR, BCL2L1, FGFR2, RARA |
Molecular functions related to ductal carcinoma in situ according to GeneDecks: (show all 21)
| id | Name | GO ID | Score | Top Affiliating Genes | | 1 | nitric-oxide synthase regulator activity | GO:030235 | 10.4 | EGFR, ESR1, AKT1 | | 2 | BH3 domain binding | GO:051434 | 10.3 | BCL2, BCL2L1, BAX | | 3 | protein phosphatase binding | GO:019903 | 10.3 | CSK, EGFR, ERBB2, CDH1, CDKN1B | | 4 | protease binding | GO:002020 | 9.9 | TP53, BCL2, BRCA2, SERPINE1, KIT | | 5 | fibronectin binding | GO:001968 | 9.8 | THBS1, IGFBP3, MMP9, VEGFA | | 6 | receptor signaling protein tyrosine kinase activity | GO:004716 | 9.8 | EGFR, ERBB2, ERBB4, KIT | | 7 | transmembrane receptor protein tyrosine kinase activity | GO:004714 | 9.8 | EGFR, ERBB2, ERBB4, ERBB3, KIT | | 8 | RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive | GO:001077 | 9.7 | HIF1A, WT1, TP63, TP53, MEF2C | | 9 | transcription factor binding | GO:008134 | 9.7 | E2F1, HIF1A, TP53, AR, FOXC1, CDKN2A | | 10 | transcription regulatory region DNA binding | GO:044212 | 9.6 | HIF1A, WT1, TP63, TP53, ERBB4, MEF2C | | 11 | protein kinase binding | GO:019901 | 9.6 | HIF1A, PTK2, PTEN, TP53, CCND1, CCNA2 | | 12 | ubiquitin protein ligase binding | GO:031625 | 9.5 | RB1, BRCA1, PAX6, BCL2, TP53, HIF1A | | 13 | protein tyrosine kinase activity | GO:004713 | 9.4 | CSK, EGFR, SRC, TNK2, ERBB2, ERBB4 | | 14 | identical protein binding | GO:042802 | 9.2 | AKT1, ESR1, ERBB2, TP53, TP63, EGFR | | 15 | calcium ion binding | GO:005509 | 9.0 | STAT1, SYP, DST, THBS1, EGF, SPARC | | 16 | sequence-specific DNA binding transcription factor activity | GO:003700 | 9.0 | ESR2, TP53, WT1, HIF1A, STAT1, PGR | | 17 | protein heterodimerization activity | GO:046982 | 9.0 | ERBB3, ERBB2, TP53, EGFR, HIF1A, TGFB1 | | 18 | enzyme binding | GO:019899 | 8.5 | AKT1, ESR1, ESR2, TP53, PTEN, PTGS2 | | 19 | protein homodimerization activity | GO:042803 | 8.0 | ERBB3, ERBB4, TERT, PTGS2, DST, TGFB1 | | 20 | ATP binding | GO:005524 | 7.2 | TP53, TNK2, PTK2, SRC, EGFR, ABCB1 | | 21 | protein binding | GO:005515 | 0.6 | ESR1, PLAUR, COPS5, WT1, KRT5, KRT19 |
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