FAP
MCID: FML011

Familial Adenomatous Polyposis malady

Summaries for Familial Adenomatous Polyposis

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6Disease Ontology, 30NIH Rare Diseases, 17Genetics Home Reference, 44Wikipedia, 22MalaCards
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Genetics Home Reference: Familial adenomatous polyposis (FAP) is an inherited disorder characterized by cancer of the large intestine (colon) and rectum. People with the classic type of familial adenomatous polyposis may begin to develop multiple noncancerous (benign) growths (polyps) in the colon as early as their teenage years. Unless the colon is removed, these polyps will become malignant (cancerous). The average age at which an individual develops colon cancer in classic familial adenomatous polyposis is 39 years. Some people have a variant of the disorder, called attenuated familial adenomatous polyposis, in which polyp growth is delayed. The average age of colorectal cancer onset for attenuated familial adenomatous polyposis is 55 years.17

MalaCards: Familial Adenomatous Polyposis, also known as adenomatous polyposis coli, is related to attenuated familial adenomatous polyposis and adenomatous polyposis coli. An important gene associated with Familial Adenomatous Polyposis is APC (adenomatous polyposis coli), and among its related pathways are Basal cell carcinoma and WNT Signaling. The drug celecoxib and the compounds threonine and glucose have been mentioned in the context of this disorder. Affiliated tissues include brain, small intestine and colon, and related mouse phenotypes are respiratory system and craniofacial.

Disease Ontology: An autosomal dominant disease that is caused by mutations in the apc gene and involves formation of numerous polyps in the epithelium of the large intestine which are initially benign and later transform into colon cancer.6

NIH Rare Diseases: Familial adenomatous polyposis (FAP) is an inherited colorectal cancer syndrome. Cancer usually develops in the lower part of the digestive system, including the large intestine (colon) and rectum. People with the classic type of familial adenomatous polyposis may begin to develop multiple noncancerous (benign) polyps (growths) in the colon as early as their teenage years. The average age at which an individual develops colon cancer in classic familial adenomatous polyposis is about 39 years. Mutations in the APC gene cause classic familial adenomatous polyposis.30

Wikipedia: Familial adenomatous polyposis (FAP) is an inherited condition in which numerous polyps form mainly in...44 more...

Aliases & Descriptions for Familial Adenomatous Polyposis

Sources:
6Disease Ontology, 44Wikipedia, 30NIH Rare Diseases, 16GeneTests, 17Genetics Home Reference, 8DISEASES, 32Novoseek , 43UMLS, 33OMIM, 24MeSH
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Aliases & Descriptions:

familial adenomatous polyposis 6 44 30 16 17 8 32
adenomatous polyposis coli 44 30 16 17 43
adenomatous polyposis of the colon 6 44 30 17
fap 44 30 16 17
hereditary polyposis coli 44 30 17
myh-associated polyposis 17 43
colon cancer, familial 44 17
polyposis coli 44 17
familial adenomatous polyposis of the colon 30
polyposis, adenomatous intestinal 30
familial polyposis of the colon 30
familial intestinal polyposis 30
familial multiple polyposis 30
familial polyposis coli 16
colon carcinoma 43
fpc 30

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Related Diseases for Familial Adenomatous Polyposis

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13GeneCards, 14GeneDecks
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Diseases related to familial adenomatous polyposis by text searches and GeneDecks gene sharing:

(show top 50)    (show all 786)
idRelated DiseaseScoreTop Affiliating Genes
1attenuated familial adenomatous polyposis38.2MUTYH, MSH2, MSH6, APC, APEX1, PTGS2
2adenomatous polyposis coli36.5KLF4, REEP5, BTRC, MYC, BMP6, BIRC5
3mutyh-associated polyposis36.1MUTYH, APC, TP53, SMAD4, KRAS
4desmoid tumor35.2PCNA, RB1, SERPINE1, CDH2, MMP7, APC
5colorectal cancer35.0NAT1, NAT2, UGT1A1, MSH2, MLH1, GSTM1
6gardner syndrome33.9KIF3A, APC, MAPRE1, CTNNB1
7lynch syndrome33.5MSH2, MSH6, MLH1, PMS2
8turcot syndrome33.3MSH2, MSH6, MLH1, APC, PMS2
9juvenile polyposis syndrome32.7BMPR1A, APC, PTEN, PTGS2, CTNNB1, SMAD4
10squamous cell carcinoma32.5CDH1, MMP7, GSTP1, CCND1, DAPK1, ODC1
11familial colorectal cancer32.0BRAF, MUTYH, MSH2, MSH6, CDH1, MLH1
12muir-torre syndrome31.9REEP5, MUTYH, MSH2, MSH6, MLH1, PMS1
13basal cell carcinoma31.8BAX, JUP, GSTM1, GSTT1, TP53, PTCH1
14duodenitis31.4PCNA, BRAF, RARB, CLIP1, UGT1A1, UGT1A10
15ulcerative colitis31.3NAT2, MUC2, MSH2, JUP, CD79A, MMP14
16papillary thyroid carcinoma31.2BRAF, RARB, RASSF1, BAX, CDH1, MMP7
17breast cancer31.2BRCA1, MYC, BMP6, CDK4, CDH1, APC
18thyroid cancer31.0BRAF, APC, HSPG2, CTNNA1, PPARG, TG
19adrenocortical tumor30.9BRAF, VHL, MYC, AXIN2, CDK4, APC
20angiofibroma30.8PCNA, VIM, MYC, BMP6, JUP, CDH2
21inflammatory breast cancer30.6MYC, RARB, RASSF1, BIRC5, MUC1, CDH1
22gastroduodenitis30.4BMP6, MUC1, MUC2, MUC5AC, MUC6, XDH
23polyneuropathy30.3BMP6, CLU, CD79A, CD40LG, FKBP1A, GSTM1
24multiple endocrine neoplasia30.2BRCA1, VHL, CDKN1A, CDH2, CDK4, CDH1
25hepatoblastoma30.1PCNA, BTRC, RB1, SERPINE1, VIM, MYC
26fibromatosis30.0PCNA, RB1, SERPINE1, VIM, MYC, CDH2
27oral submucous fibrosis30.0PCNA, BIRC5, GSTM1, GSTT1, HLA-A, TP53
28arthropathy29.9BMP6, CD79A, IL2, ALPPL2, HSPG2, PTGS2
29hepatitis c29.6CD40LG, IRF1, IL2, MAPK8, HLA-A, CYP1A2
30keloids29.5SERPINE1, BMP6, MAPK8, SMAD2, SMAD3
31carcinoid tumors29.3PCNA, RASSF1, MUC1, MSH2, CDKN1A, CDX2
32nephroblastoma29.3VIM, JUP, CAT, TP53, PTEN, CTNNB1
33was-related disorders29.2KIF3A, BRAF, XDH, FBN2, MAPRE1, GNRH1
34inflammatory bowel disease29.2NAT2, MUC2, MUC5AC, XDH, JUP, CDH2
35colonic neoplasm29.0CLU, CDKN1A, CDH1, CA1, TP53, SRC
36choriocarcinoma28.8KLF6, PCNA, MYC, LIFR, JUP, CDKN1A
37polyposis28.4PIN1, KLF4, KLF6, REEP5, KIF3A, PCNA
38germ cell tumor28.4PCNA, RB1, BRAF, VHL, RARB, RASSF1
39intraepithelial neoplasm28.1PCNA, BMP6, MUC1, MUC2, MUC5AC, MUC6
40colonic polyps27.5PCNA, MUC1, MUC2, MSH2, MSH6, JUP
41adenoma27.4KLF4, PCNA, RB1, VIM, NAT1, NAT2
42ovarian cancer27.1RB1, BRCA1, CDKN1A, CDK4, CCND1, TFDP1
43t-cell leukemia27.1MYC, BIRC5, XPO1, CDK4, IL2, MAPK8
44teratocarcinoma27.0SERPINE1, MYC, RARB, RAC1, CDKN1A, INHBA
45aphthous stomatitis27.0IL2, CAT, HLA-A, EGF, TKT, SOD1
46human t-cell leukemia virus type 126.9PIN1, RB1, MYC, BIRC5, XPO1, CDKN1A
47oral squamous cell carcinoma26.8PIN1, PCNA, RB1, SERPINE1, VIM, BRAF
48amyloidosis26.6CLU, CD79A, CD40LG, CCND1, HSPG2, HLA-A
49cervical adenocarcinoma26.5PCNA, BRAF, MYC, RASSF1, MUC5AC, CDKN1A
50stomatitis26.4BAX, CD79A, IL2, CAT, HLA-A, EGF

Graphical network of the top 20 diseases related to familial adenomatous polyposis:



Graphical network of diseases related to familial adenomatous polyposis

Clinical Features for Familial Adenomatous Polyposis

Drugs & Therapeutics for Familial Adenomatous Polyposis

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4CenterWatch, 29NIH Clinical Center, 5ClinicalTrials, 43UMLS, 28NDF-RT
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Approved drugs:

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Drug clinical trials:

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Search CenterWatch for familial adenomatous polyposis

Inferred drug relations via UMLS/NDF-RT:

43 28 celecoxib

Genetic Tests for Familial Adenomatous Polyposis

Anatomical Context for Familial Adenomatous Polyposis

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22MalaCards
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MalaCards organs/tissues related to familial adenomatous polyposis:

22
Brain, Small intestine, Colon, Lung, Pancreas, Thyroid, T cells, B cells

Phenotypes for genes affiliated with Familial Adenomatous Polyposis

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25MGI
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MGI Mouse Phenotypes related to familial adenomatous polyposis:

25 (show all 29)
idDescriptionMGI Source AccessionScoreTop Affiliating Genes
1respiratory system phenotypeMP:000538810.5KIF3A, BRCA1, BMPR1A, FKBP1A, DLG1, SMPD1
2craniofacial phenotypeMP:000538210.3KLF4, KIF3A, BMPR1A, LEF1, AXIN2, INHBA
3reproductive system phenotypeMP:00053899.8KLF4, KLF6, BTRC, NAT1, BRCA1, VHL
4normal phenotypeMP:00028739.7KLF4, REEP5, NAT1, BRAF, BRCA1, VHL
5hematopoietic system phenotypeMP:00053979.6KLF6, PCNA, BTRC, BRAF, BRCA1, VHL
6endocrine/exocrine gland phenotypeMP:00053799.5KLF4, BRCA1, BMPR1A, XDH, AXIN2, CDC42
7pigmentation phenotypeMP:00011869.5RB1, BRAF, BRCA1, MYC, BMPR1A, RAC1
8other phenotypeMP:00053959.1RARB, CLU, AXIN1, CD40LG, MMP14, IL2
9embryogenesis phenotypeMP:00053809.0KLF6, KIF3A, VIM, NAT1, BRAF, BRCA1
10renal/urinary system phenotypeMP:00053678.5KIF3A, BRAF, BRCA1, VHL, RARB, CLU
11hearing/vestibular/ear phenotypeMP:00053778.4RB1, MYC, BMPR1A, RARB, BAX, AXIN1
12no phenotypic analysisMP:00030128.3PCNA, RB1, MYC, MUC1, CD79A, CDH1
13limbs/digits/tail phenotypeMP:00053718.3KIF3A, RB1, BRCA1, VHL, BMPR1A, RARB
14liver/biliary system phenotypeMP:00053708.3KLF6, VHL, FKBP1A, GSK3B, IL2, APEX1
15immune system phenotypeMP:00053877.8BTRC, VIM, BRAF, BRCA1, BMPR1A, CLU
16integument phenotypeMP:00107717.5PIN1, KLF4, KLF6, RB1, BRAF, BRCA1
17skeleton phenotypeMP:00053907.3KIF3A, RB1, BRAF, BRCA1, VHL, MYC
18nervous system phenotypeMP:00036317.2RB1, BRAF, BRCA1, MYC, BMPR1A, RAC1
19behavior/neurological phenotypeMP:00053867.2KLF4, KIF3A, RB1, VIM, BRAF, BMPR1A
20mortality/agingMP:00107687.1KLF4, KLF6, KIF3A, BTRC, RB1, SERPINE1
21digestive/alimentary phenotypeMP:00053817.1KLF4, KIF3A, RB1, BRAF, BRCA1, VHL
22muscle phenotypeMP:00053697.1RB1, VIM, BRAF, BRCA1, VHL, MYC
23adipose tissue phenotypeMP:00053756.6RB1, SERPINE1, BRAF, BRCA1, MYC, LEF1
24tumorigenesisMP:00020066.5KLF4, BTRC, RB1, SERPINE1, BRAF, BRCA1
25vision/eye phenotypeMP:00053916.3PIN1, KIF3A, RB1, VIM, NAT1, BRAF
26cardiovascular system phenotypeMP:00053855.2KLF6, KIF3A, RB1, SERPINE1, VIM, BRAF
27cellular phenotypeMP:00053845.1PIN1, KLF4, KLF6, KIF3A, PCNA, BTRC
28growth/size phenotypeMP:00053783.9PIN1, KLF6, KIF3A, RB1, SERPINE1, BRAF
29homeostasis/metabolism phenotypeMP:00053763.4KLF4, KIF3A, RB1, SERPINE1, VIM, NAT1

Publications for genes affiliated with Familial Adenomatous Polyposis

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35PubMed
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Articles related to familial adenomatous polyposis:

(show top 50)    (show all 271)
idTitleAuthorsYearAffiliating Genes
1Family history, surgery, and APC mutation are risk fa ctors for desmoid tumors in familial adenomatous polyposis: an international co hort study. (21904137)Nieuwenhuis M.H.... Vasen H.F.2011APC
2Functional analysis of MUTYH mutated proteins associa ted with familial adenomatous polyposis. (20418187)D'Agostino V.G.... Mazzei F.2010MUTYH
3ERI^ expression in normal, adenomatous and carcinomato us tissues of patients with familial adenomatous polyposis. (20446826)Barone M.... Di Leo A.2010ESR2
4Familial adenomatous polyposis. (19414146)Macrae F.... Nasioulas S.2009APC
5Wnt pathway, angiogenetic and hormonal markers in sporadic and familial adenomatous polyposis-associated juvenile nasopharyngeal angiofibromas (JNA). (18227724)Ponti G.... Seidenari S.2008CDH1, CTNNB1
6Culture of primary epithelial adenoma cells from familial adenomatous polyposis patients. (18507027)Fostira F.... Nasioulas G.2008APC
7Familial adenomatous polyposis in children younger than age ten years: a multidisciplinary clinic experience. (18157572)Attard T.M.... Lynch H.T.2008APC2
8A large novel deletion in the APC promoter region causes gene silencing and leads to classical familial adenomatous polyposis in a Manitoba Mennonite kindred. (18982352)Charames G.S.... Bapat B.2008APC
9Somatic APC mosaicism: a frequent cause of familial adenomatous polyposis (FAP). (17486639)Aretz S.... Friedl W.2007APC
10Recurrent idiopathic pancreatitis in familial adenomatous polyposis: report of a case-series and review of the literature. (17318339)van Esch A.A.... Nagengast F.M.2007SPINK1
11Heterogeneous molecular mechanisms underlie attenuated familial adenomatous polyposis. (18091433)Cattaneo F.... Ranzani G.N.2007APC, OGG1, MSH2
12A novel exon duplication event leading to a truncatin g germ-line mutation of the APC gene in a familial adenomatous polyposis family . (16736293)McCart A.... Silver A.2006APC
13APC germ-line mutations in southern Spanish patients with familial adenomatous polyposis: genotype-phenotype correlations and identification of eight novel mutations. (15857185)GarcA-a-Lozano J.R.... NA_A+ez-RoldA!n A.2005APC
14Nuclear accumulation of beta-catenin without an additional somatic mutation in coding region of the APC gene in hepatoblastoma from a familial adenomatous polyposis patient. (14654913)Inukai T.... Nakazawa S.2004APC, CTNNB1
15Prostanoids, ornithine decarboxylase, and polyamines in primary chemoprevention of familial adenomatous polyposis. (14762779)Giardiello F.M.... Yang V.W.2004ODC1
16Familial adenomatous polyposis patients without an identified APC germline mutation have a severe phenotype. (14724162)Bisgaard M.L.... Bulow S.2004APC
17E-cadherin expression is homogeneously reduced in adenoma from patients with familial adenomatous polyposis: an immunohistochemical study of E-cadherin, beta-catenin and cyclooxygenase-2 expression. (14986031)Jungck M.... Sauerbruch T.2004CDH1, CTNNB1, PTGS2
18Analysis of somatic APC mutations in rare extracolonic tumors of patients with familial adenomatous polyposis coli. (15287021)Blaker H.... Helmke B.M.2004APC, CTNNB1
19Comprehensive genetic and endoscopic evaluation may be necessary to distinguish sporadic versus familial adenomatous polyposis-associated abdominal desmoid tumors. (15179376)Bandipalliam P.... Syngal S.2004APC
20Familial adenomatous polyposis syndrome (FAP): pathogenesis and molecular mechanisms (14685680)Friedrich A.... Kullmann F.2003GSK3B, CTNNB1, RPS27A
21Multiple approach to the exploration of genotype-phen otype correlations in familial adenomatous polyposis. (12721244)Bertario L.... Radice P.2003APC
22A randomized, double-blind, placebo-controlled trial of the effects of rofecoxib, a selective cyclooxygenase-2 inhibitor, on rectal polyps in familial adenomatous polyposis patients. (14581346)Higuchi T.... Sugihara K.2003PTGS2
23Familial adenomatous polyposis associated with multiple endocrine neoplasia type 1-related tumors and thyroid carcinoma: a case report with clinicopathologic and molecular analyses. (11756777)Sakai Y.... Kato Y.2002APC, CTNNB1
24Expression of COX-2 and Wnt pathway genes in adenomas of familial adenomatous polyposis patients treated with meloxicam. (12174906)Dobbie Z.... Bauerfeind P.2002MYC, CCND1, PTGS2
25Pathogenic mutations and rare variants of the APC gene identified in 75 Belgian patients with familial adenomatous polyposis by fluorescent enzymatic mutation detection (EMD). (12173026)Michils G.... Matthijs G.2002APC
26Molecular diagnosis of familial adenomatous polyposis (FAP): genotyping of adenomatous polyposis coli (APC) alleles by MALDI-TOF mas s spectrometry. (11983341)Bonk T.... Becker C.M.2002APC
27Expression of putative anticancer targets in familial adenomatous polyposis and its association with the APC mutation status. (11713587)Humar B.... Bendik I.2001MMP7, ODC1, PRKCB
28Biallelic inactivation of the APC gene is associated with hepatocellular carcinoma in familial adenomatous polyposis coli. (11466687)Su L.K.... Vauthey J.N.2001APC
29Relationship between APC genotype, polyp distribution, and oral sulindac treatment in the colon and rectum of patients with familial adenomatous polyposis. (11535846)Guldenschuh I.... Scott R.J.2001APC
30Mutation analysis of the adenomatous polyposis coli (APC) gene in northwest Spanish patients with familial adenomatous polyposis (FAP) and sporadic colorectal cancer. (11668620)Ruiz-Ponte C.... Barros F.2001APC
31Duodenal adenomatosis in familial adenomatous polyposis coli. A review of the literature and results from the Heidelberg Polyposis Register. (11355321)Kadmon M.... Herfarth C.2001APC
32Congenital hypertrophy of the retinal pigment epithelium and APC mutations in Chinese with familial adenomatous polyposis. (11741105)Pang C.P.... Lam D.S.2001APC
33Molecular analysis of sulindac-resistant adenomas in familial adenomatous polyposis. (11751493)Keller J.J.... Giardiello F.M.2001CTNNB1, BAX, PTGS2
34Germline mutations of the APC gene in patients with familial adenomatous polyposis-associated thyroid carcinoma: results from a European cooperative study. (10634400)Cetta F.... Olschwang S.2000APC
35Nuclear localization of immunoreactive beta-catenin is specific to familial adenomatous polyposis in papillary thyroid carcinoma. (11092973)Kurihara K.... Fukayama M.2000CTNNB1
36Marfan-like habitus and familial adenomatous polyposis in two unrelated males: a significant association? (10439970)Calin G.... Fodde R.1999FBN2
37Adrenocortical tumor in a patient with familial adenomatous polyposis: a case associated with a complete inactivating mutation of the APC gene and unusual histological features. (9496836)Wakatsuki S.... Horii A.1998NR5A1
38Frequent mutations in the beta-catenin gene in desmoid tumors from patients without familial adenomatous polyposis. (10367940)Miyoshi Y.... Nakamura Y.1998CTNNB1
39Overexpression of the nonpancreatic secretory group II PLA2 messenger RNA and protein in colorectal adenomas from familial adenomatous polyposis patients. (9458096)Kennedy B.P.... Bapat B.1998PLA2G2A
40Childhood hepatocellular adenoma in familial adenomatous polyposis: mutations in adenomatous polyposis coli gene and p53. (9041254)Bala S.... Ballhausen W.G.1997TP53
41Novel germline mutations in the APC gene and their phenotypic spectrum in familial adenomatous polyposis kindreds. (9341879)Walon C.... Verellen-Dumoulin C.1997APC
42Severe upper gastrointestinal polyposis associated with sparse colonic polyposis in a familial adenomatous polyposis family with an APC mutation at codon 1520. (9391252)Leggett B.A.... Cowen A.E.1997APC
43Clinical and genomic influence of sulindac on rectal mucosa in familial adenomatous polyposis. (9336110)Winde G.... Osswald H.1997HRAS, TP53
44p53 Protein overexpression in colorectal tumors from patients with familial adenomatous polyposis: is it an early or late event? (8561108)Levi E.... Rao M.S.1996TP53
45Germline APC mutation (Gln1317) in a cancer-prone family that does not result in familial adenomatous polyposis. (8834176)White S.... Wyllie A.H.1996APC
46APC mutation in the alternatively spliced region of exon 9 associated with late onset familial adenomatous polyposis. (8522331)van der Luijt R.B.... Meera Khan P.1995APC
47Exclusion of the APC gene as the cause of a variant form of familial adenomatous polyposis (FAP) (8213830)Stella A.... Guanti G.1993APC
48Advanced gastroduodenal polyposis with ras mutations in a patient with familial adenomatous polyposis. (8387955)Odze R.D.... Gallinger S.1993GGT3P
49Genetic changes of both p53 alleles associated with the conversion from colorectal adenoma to early carcinoma in familial adenomatous polyposis and non-familial adenomatous polyposis patients. (1319835)Kikuchi-Yanoshita R.... Mori T.1992TP53
50Transforming genes from familial adenomatous polyposis patient cells detected by a tumorigenicity assay. (1970154)Yuasa Y.... Tonomura A.1990HRAS, NRAS

Expression for genes affiliated with Familial Adenomatous Polyposis

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1BioGPS
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Expression patterns in normal tissues for genes affiliated with Familial Adenomatous Polyposis

Pathways for genes affiliated with Familial Adenomatous Polyposis

Sources:
20KEGG, 36QIAGEN, 3Cell Signaling Technology, 37R&D Systems, 41Thomson Reuters, 34PharmGKB, 10EMD Millipore
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Pathways related to familial adenomatous polyposis according to GeneDecks:

(show top 50)    (show all 256)
idPathwayScoreTop Affiliating Genes
1Basal cell carcinoma2011.2WNT5A, WNT2, TCF7L2, DVL1, CTNNB1, PTCH1
2WNT Signaling3611.2TCF4, TCF7L2, DKK1, CSNK1A1, CSNK1D, CSNK1E
3Wnt / Hedgehog / Notch311.2CDX2, PTCH1, WNT5A, CSNK1A1, DKK1, TCF7L2
4Wnt signaling pathway2011.1BTRC, MYC, RAC1, LEF1, DVL1, TCF7L2
5Colorectal cancer2011.1TCF7L2, TGFBR2, SMAD3, SMAD2, MAPK8, APC2
6Wnt Signaling Pathway3711.0WNT1, CSNK1E, CSNK1D, CSNK1A1, PRKCB, TCF7L2
7Signal transduction_PTEN pathway4110.7PCNA, GSK3B
8Busulfan Pathway, Pharmacodynamics3410.7MYC, NAT1, MSH2, NAT2, APEX1, GSTP1
9Thyroid cancer2010.7TCF7L2, KRAS, NRAS, PPARG, CTNNB1, TP53
10Germ Cell-Sertoli Cell Junction Dynamics3610.6CTNNA1, SRC, HRAS, AXIN1, ILK, CDC42
11G12-G13 in Cellular Signaling3610.6RAC1, AXIN1, CDH2, CDC42, CDH13, WNT2
12TGF-beta Signaling Pathways3710.4ESR2, HNF4A, MAPK8, CDC42, TGFBR2, RAC1
13Cell cycle Regulation of G1/S transition (part 1)1010.3CCND1, SMAD4, BTRC, BRCA1, TGFBR2, CDKN1A
14Cell cycle_Regulation of G1/S transition (part 1)4110.3GSK3B, CCND1, PPP2R4, CDKN1A, SMAD3, SMAD4
15Adherens junction2010.3CTNNA1, IQGAP1, CDH1, CDC42, LEF1, RAC1
16Sertoli-Sertoli Cell Junction Dynamics3610.2GSK3B, RAC1, JUP, CDC42, NRAS, CTNND1
17Factors Promoting Cardiogenesis in Vertebrates3610.1HNF4A, TCF7L2, TCF4, TGFBR2, DVL1, CTNNB1
18Cell Cycle / Checkpoint Control310.1MLH1, MGMT, GSTP1, APEX1, MAPRE1, TP53
19Drug metabolism - other enzymes2010.0UGT2B7, UGT2B4, UGT1A6, UGT1A4, UGT1A10, UGT1A1
20Chronic myeloid leukemia2010.0TP53, CTBP1, SMAD3, SMAD4, TGFBR2, HRAS
21Drug metabolism - cytochrome P4502010.0UGT1A1, UGT1A4, UGT1A10, UGT1A3, CYP1A2, UGT1A6
22Metabolism of xenobiotics by cytochrome P450209.9UGT1A1, UGT1A10, UGT1A4, UGT1A6, UGT2B4, EPHX1
23Akt Signaling369.6LIFR, NRAS, TIMP3, PPP2R4, TNFRSF10A, CCND1
24Translation Non-genomic (rapid) action of Androgen Receptor109.3PTEN, WNT2, WNT5A, DVL1, EGFR, CTNNB1
25Colorectal Cancer Metastasis369.3BRAF, MYC, BIRC5, PTGS2, SRC, CTNNB1
26Signal transduction PTEN pathway109.3SRC, PTEN, HRAS, GSK3B, CDKN1A, LEF1
27Transcription_Androgen Receptor nuclear signaling419.2GSK3B, TGFBR2, WNT5A, WNT1, EGFR, DVL1
28Transcription Androgen Receptor nuclear signaling109.2CDKN1A, HRAS, CTNNB1, SMAD3, EGF, EGFR
29Endometrial cancer209.1PTEN, CTNNA1, CTNNB1, NRAS, KRAS, EGF
30GnRH signaling pathway209.1KRAS, PLA2G2A, PLA2G4A, PLA2G10, NRAS, SRC
31Non-small cell lung cancer209.0RB1, BRAF, RASSF1, CDK4, HRAS, NRAS
32JNK Pathway368.9TCF4, RAC1, LIFR, BAX, CDC42, IL2
33Glioblastoma Multiforme368.9HRAS, TP53, PTEN, SRC, NRAS, EGFR
34MAPK signaling pathway208.7HRAS, MAP3K1, MAPK8, CDC42, RAC1, MYC
35Bladder cancer208.6MYC, BRAF, RB1, EGFR, EGF, KRAS
36EGF Pathway368.5MYC, SRC, EGFR, EGF, NRAS, RAC1
37ILK Signaling368.4CDC42, CDH2, CTNNB1, PPP2R4, EGF, EGFR
38Translation_Non-genomic (rapid) action of Androgen Receptor418.3EGFR, EGF, GSK3B, WNT5A, WNT2, CTNNB1
39Melanoma208.3TP53, CDK4, EGFR, EGF, HRAS, CCND1
40GSK3 Signaling368.2BTRC, BMP6, LIFR, LEF1, AXIN1, CDH2
41Prostate cancer208.1RB1, TCF7L2, TGFA, EGFR, EGF, BRAF
42Pathways in cancer208.0BAX, AXIN1, AXIN2, MSH2, MSH6, JUP
43Nanog in Mammalian ESC Pluripotency368.0BRAF, BMP6, WNT2, TGFA, TIMP3, DVL1
44ErbB signaling pathway207.9CDKN1A, MYC, BRAF, TGFA, NRAS, GSK3B
45Epithelial Adherens Junctions367.6NRAS, HNF4A, CTNND1, CTNNB1, CTNNA1, SRC
46Glioma207.6TP53, CCND1, BRAF, CDKN1A, HRAS, PRKCB
47TGF-Beta Pathway367.3IL2, NRAS, EGF, EGFR, TIMP3, TGFA
48Pancreatic Adenocarcinoma367.2CDK4, TGFBR2, MMP7, ARHGEF4, IL2, CCND1
49MAPK Signaling367.1LIFR, EGFR, TIMP3, TGFA, TCF4, TCF7L2
50Molecular Mechanisms of Cancer366.8EGF, EGFR, TIMP3, DVL1, TGFA, TGFBR2

Compounds for genes affiliated with Familial Adenomatous Polyposis

Sources:
32Novoseek , 42Tocris Bioscience, 9DrugBank, 34PharmGKB, 18HMDB
See all sources

Compounds related to familial adenomatous polyposis according to GeneDecks:

(show top 50)    (show all 496)
idCompoundScoreTop Affiliating Genes
1threonine32 10.8BMPR1A, MUC2, MUC5AC, AXIN2, MSH6, CDC42
2glucose32 10.8BRAF, VHL, XPO1, CDK4, MGMT, APC
3exisulind32 10.6BAX, CDH1, APC, MAPK8, CCND1, PTGS2
4o6-methylguanine32 10.4PCNA, BRAF, RARB, RASSF1, MSH2, MSH6
58-oxo-dg32 10.4PCNA, MUTYH, APEX1, TP53, OGG1, NUDT1
68-oxoguanine32 10.2PCNA, BRCA1, MUTYH, CDKN1A, MGMT, GSTM1
7camptothecin32 42 9 9 12.7PCNA, RB1, BRCA1, MYC, BIRC5, CLU
8atp32 9.6RB1, BRAF, BRCA1, RAC1, BIRC5, CLU
9nocodazole32 42 9 9 12.5PIN1, VIM, BRCA1, RAC1, BIRC5, CLIP1
10celecoxib32 42 34 9 18 9 14.4PCNA, BIRC5, BAX, CDKN1A, CDH1, APC
11biotin32 9 18 9 12.4KLF4, PCNA, RB1, VIM, MUC1, MSH2
12indole-3-carbinol32 9.4BRCA1, BIRC5, BAX, CDKN1A, CDK4, CDH1
13adpribose32 9.3PCNA, RB1, BRCA1, BIRC5, BAX, CDKN1A
14arsenite32 18 10.3PCNA, MYC, RAC1, BIRC5, BAX, CDKN1A
15calcium32 9 18 9 12.1PIN1, RB1, BRAF, BRCA1, VHL, RAC1
16wortmannin32 42 10.1VIM, BRAF, RAC1, BIRC5, BAX, CDKN1A
17n acetylcysteine32 9.1PCNA, BIRC5, CLU, MUC5AC, CD79A, CDKN1A
184-hydroxytamoxifen32 9.0BRCA1, MYC, CLU, UGT1A4, CDH2, SRC
19ascorbic acid32 18 10.0PCNA, NAT1, RAC1, CD40LG, CDK4, GSTM1
20losartan32 34 9 9 11.9PCNA, SERPINE1, BMP6, UGT1A1, UGT1A10, UGT1A3
21ndga32 8.9HSPG2, CAT, PTGS2, PTGS1, ODC1, PPARG
22nitric oxide32 9 18 9 11.7KLF4, KLF6, RB1, NAT1, NAT2, VHL
23irinotecan32 34 9 9 11.7BRAF, UGT1A1, UGT1A6, BAX, CDKN1A, CDH1
24methotrexate32 34 42 9 9 12.7PCNA, RB1, SERPINE1, VIM, NAT2, BRCA1
25aspirin32 34 18 10.6PCNA, SERPINE1, BMP6, BIRC5, UGT1A6, CD79A
26tgf beta132 8.6SERPINE1, VIM, BMP6, CDKN1A, CDK4, CDH1
27matrigel32 8.4RB1, SERPINE1, VIM, BRAF, BMP6, RAC1
28mg 13232 42 9.3PCNA, BRCA1, MYC, BIRC5, BAX, CDKN1A
29cholesterol32 9 18 9 11.3RB1, SERPINE1, NAT2, RAC1, LIFR, BIRC5
30dihydrotestosterone32 9 18 9 11.2SERPINE1, VIM, BMP6, CLU, UGT1A4, UGT2B15
31butyrate32 8.2KLF4, PCNA, RB1, VIM, MYC, BMP6
32retinoid32 8.0VIM, MYC, BMP6, RARB, MUC5AC, BAX
33lactate32 8.0PCNA, VIM, BMP6, BIRC5, CLU, XDH
34thymidylate32 7.9PCNA, RB1, VIM, BRCA1, BIRC5, UGT1A1
35gf 109203x32 42 8.9CDKN1A, MAPK8, CCND1, GNRH1, HSPG2, HRAS
36agar32 7.7RB1, VIM, BRAF, BRCA1, RARB, RASSF1
37herbimycin a32 42 8.6MYC, BMP6, CD40LG, CDK4, CDH1, MMP14
38estradiol32 9 18 9 10.5PCNA, RB1, SERPINE1, VIM, BRCA1, RARB
39calcitriol32 42 9 18 9 11.5RB1, MYC, BMP6, RARB, CLU, XPO1
40lipid32 7.4RB1, SERPINE1, VIM, BRAF, BRCA1, RARB
41pd 98,05932 7.0KLF4, RB1, SERPINE1, BRAF, MYC, BMP6
42indomethacin32 9 9 9.0PCNA, VIM, MYC, BMP6, BIRC5, UGT1A1
43estrogen32 7.0KLF6, PCNA, SERPINE1, NAT1, NAT2, BRCA1
44actinomycin d32 6.9RB1, SERPINE1, VIM, VHL, MYC, RARB
45thymidine32 18 7.8KLF4, PCNA, RB1, BRCA1, MYC, BMP6
46paraffin32 6.7PCNA, RB1, VIM, BRAF, BRCA1, MYC
47retinoic acid32 42 18 8.6RB1, SERPINE1, BRAF, BRCA1, MYC, BMP6
48creatinine32 6.5PCNA, SERPINE1, VIM, BMP6, MUC1, CD79A
49tamoxifen32 34 9 9 8.4PCNA, VIM, BRCA1, MYC, BMP6, BIRC5
50genistein32 9 18 9 8.0PCNA, RB1, SERPINE1, VIM, BRCA1, MYC

GO Terms for genes affiliated with Familial Adenomatous Polyposis

Sources:
12Gene Ontology
See all sources

Cellular components related to familial adenomatous polyposis according to GeneDecks:

(show all 19)
idNameGO IDScoreTop Affiliating Genes
1lateral plasma membraneGO:01632811.0DVL1, CTNNB1, DLG1, APC, IQGAP1, CDH1
2catenin complexGO:01634210.9CTNNB1, CTNNA1, APC2, CDH1, CDH2, JUP
3Axin-APC-beta-catenin-GSK3B complexGO:03474710.9CTNNB1, APC, GSK3B, AXIN2, AXIN1
4cell-cell adherens junctionGO:00591310.8DSC2, CTNND1, CTNNB1, APC, CDH1, CDH2
5APC-Axin-1-beta-catenin complexGO:03474210.7AXIN1, APC, CTNNB1
6protein-DNA complexGO:03299310.7TCF7L2, CTNNB1, JUP, LEF1
7transcription factor complexGO:00566710.7TCF4, TFDP1, SMAD4, SMAD3, SMAD2, CTNNB1
8cytoplasmic microtubuleGO:00588110.7MAPRE1, APC2, APC, CLIP1, BIRC5
9cell-cell junctionGO:00591110.6JUP, CDH2, ILK, DLG1, CTNNA1, CTNNB1
10SMAD protein complexGO:07114110.4SMAD2, SMAD3, SMAD4
11caveolaGO:00590110.2TGFBR2, SRC, PTGS2, PTCH1, CDH13, BMPR1A
12internal side of plasma membraneGO:00989810.0ACP1, DLG1, PTEN, CDH1, JUP
13nucleoplasmGO:0056549.4NR5A1, PPARD, PPARA, PPARG, DDIT3, TP53
14cytoplasmGO:0057378.8DAPK1, SRP19, CTBP1, CTNNB1, CTNND1, PPP2R4
15endoplasmic reticulum membraneGO:0057898.8PTGS1, DLG1, CYP1A2, PPM1L, PLA2G4A, PLA2G2A
16cytosolGO:0058298.1CSNK1E, CTNNA1, ODC1, SRP19, SRC, DLG1
17nucleusGO:0056347.1PPP2R4, PPARA, PPARD, NR5A1, SMAD2, SMAD3
18extracellular spaceGO:0056156.5PLA2G2A, EGF, EGFR, ACE, TGFA, DKK1
19plasma membraneGO:0058866.0SMAD3, NRAS, CTNND1, CTNNB1, CTNNA1, SRC

Biological processes related to familial adenomatous polyposis according to GeneDecks:

(show top 50)    (show all 85)
idNameGO IDScoreTop Affiliating Genes
1Wnt receptor signaling pathwayGO:01605511.2CTNNB1, WNT2, CSNK1D, CSNK1A1, MCC, APC2
2negative regulation of canonical Wnt receptor signaling pathwayGO:09009011.1CTNND1, LEF1, WNT5A, DKK1, TCF7L2, DDIT3
3canonical Wnt receptor signaling pathwayGO:06007011.0DVL1, TCF7L2, STK11, WNT1, WNT2, WNT5A
4cellular response to indole-3-methanolGO:07168110.9BRCA1, JUP, CDH1, CTNNA1, CTNNB1
5cell-cell junction organizationGO:04521610.9RAC1, JUP, CDH2, HNF4A, CTNNA1, CTNND1
6adherens junction organizationGO:03433210.9CDH13, CTNND1, CTNNA1, CDH1, CDH2, JUP
7maintenance of DNA repeat elementsGO:04357010.9MSH2, MSH6, TCF7L2, AXIN2
8positive regulation of canonical Wnt receptor signaling pathwayGO:09026310.8ILK, JUP, SRC, DVL1, SMAD3, CSNK1D
9DNA repairGO:00628110.8APEX1, PCNA, RPS27A, OGG1, NUDT1, MUTYH
10positive regulation of protein phosphorylationGO:00193410.7AXIN1, PIN1, CSNK1D, AXIN2, CCND1, HRAS
11mismatch repairGO:00629810.7PMS2, MSH6, MSH2, MUTYH, PCNA
12negative regulation of transforming growth factor beta receptor signaling pathwayGO:03051210.7XPO1, SMAD2, TP53, SMAD3, RPS27A, WNT1
13negative regulation of transcription, DNA-dependentGO:04589210.6TCF7L2, TP53, CTBP1, CTNNB1, PPARG, PPARD
14response to organic cyclic compoundGO:01407010.6CTNNA1, LEF1, WNT5A, TIMP3, PTGS2, CCND1
15protein phosphorylationGO:00646810.6PRKCB, CSNK1A1, CSNK1D, CSNK1E, ILK, TGFBR2
16response to DNA damage stimulusGO:00697410.6POLB, STK11, DDIT3, MYC, BAX, TP53
17base-excision repairGO:00628410.5POLB, OGG1, TP53, APEX1, MUTYH, PCNA
18negative regulation of transcription from RNA polymerase II promoterGO:00012210.5DKK1, PPARG, PPARA, PPARD, SMAD2, PTCH1
19negative regulation of cell proliferationGO:00828510.5AXIN2, APC, INHBA, IRF1, CDH13, KLF4
20cell cycle arrestGO:00705010.5IRF1, INHBA, ILK, APC, HRAS, STK11
21cellular glucuronidationGO:05269510.4UGT2B7, UGT2B4, UGT2B15, UGT1A10
22induction of apoptosis by intracellular signalsGO:00862910.4HRAS, BAX, CDKN1A, MSH6, CLU, MYC
23organ regenerationGO:03110010.4PPARG, CDKN1A, LIFR, LEF1, UGT1A1, WNT1
24xenobiotic metabolic processGO:00680510.4CYP1A2, HNF4A, GSTP1, GSTM1, GSTA1, FMO3
25positive regulation of apoptotic processGO:04306510.4SOD1, PLA2G4A, DDIT3, PPP2R4, SMPD1, PTGS2
26striated muscle cell differentiationGO:05114610.3RB1, CDH2, HRAS, NRAS, KRAS
27transforming growth factor beta receptor signaling pathwayGO:00717910.3TFDP1, TGFBR2, SERPINE1, MYC, BMPR1A, XPO1
28negative regulation of sequence-specific DNA binding transcription factor activityGO:04343310.3RB1, BTRC, DDIT3, PLA2G10, TCF7L2, HNF4A
29regulation of cell proliferationGO:04212710.3MMP7, PTGER2, TGFBR2, DNMT1, SERPINE1, PIN1
30response to drugGO:04249310.1PTGS2, DDIT3, SRP19, CTNNB1, TGFBR2, TGFA
31palate developmentGO:06002110.1INHBA, WNT5A, BMPR1A, LEF1, SMAD2, SMAD4
32wound healingGO:04206010.0WNT5A, KLF6, TGFA, SMAD3, PPARD, PPARA
33negative regulation of cell growthGO:03030810.0CDKN1A, RB1, ESR2, SMAD4, PPARG, HNF4A
34transcription initiation from RNA polymerase II promoterGO:00636710.0SMAD4, MYC, RARB, ESR2, HNF4A, SERPINE1
35mitotic cell cycleGO:0002789.9BIRC5, PCNA, CSNK1E, CDKN1A, XPO1, CLIP1
36negative regulation of epithelial cell proliferationGO:0506809.9WNT5A, DLG1, PTEN, ESR2, MCC, RB1
37positive regulation of transcription, DNA-dependentGO:0458939.9RB1, BRCA1, VHL, MYC, BMPR1A, LEF1
38negative regulation of neuron apoptotic processGO:0435249.8BAX, SOD1, ILK, HRAS, NRAS, KRAS
39Ras protein signal transductionGO:0072659.8SRC, KRAS, NRAS, TP53, HRAS, CDKN1A
40positive regulation of fibroblast proliferationGO:0481469.8EGFR, WNT5A, WNT2, CDKN1A, MYC, WNT1
41apoptotic processGO:0069159.6MAPK8, TP53, PRKCB, DAPK1, CTNNB1, TGFBR2
42positive regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic processGO:20000609.6EGF, CLU, AXIN1, PTEN
43negative regulation of apoptotic processGO:0430669.3WNT5A, GSK3B, SERPINE1, GSTP1, APC, MAPK8
44small molecule metabolic processGO:0442819.3XDH, UGT1A6, UGT1A4, UGT1A1, PLA2G4A, NAT2
45positive regulation of transcription from RNA polymerase II promoterGO:0459449.1RPS27A, SMAD4, SMAD3, SMAD2, NR5A1, PPARA
46cell proliferationGO:0082839.1SMAD4, PCNA, AXIN2, ILK, MAPRE1, MAPRE2
47anti-apoptosisGO:0069168.8TGFA, MUC1, TCF7L2, SOD1, POLB, VHL
48blood coagulationGO:0075968.7PRKCB, PLA2G4A, EGF, HRAS, NRAS, SRC
49positive regulation of cell proliferationGO:0082848.4PTEN, HRAS, ILK, IL2, CDK4, LEF1
50epidermal growth factor receptor signaling pathwayGO:0071738.1TGFA, SRC, RPS27A, NRAS, HRAS, CDC42

Molecular functions related to familial adenomatous polyposis according to GeneDecks:

(show all 28)
idNameGO IDScoreTop Affiliating Genes
1beta-catenin bindingGO:00801311.0TCF7L2, SMAD3, CTNNA1, APC2, APC, GSK3B
2I-SMAD bindingGO:07041110.9SMAD4, SMAD2, CTNNB1, AXIN2, AXIN1
3cadherin bindingGO:04529610.9CTNND1, CTNNB1, CTNNA1, APC, CDH13, JUP
4gamma-catenin bindingGO:04529510.9TCF7L2, CTNNA1, APC, CDH1, CDH2, LEF1
5R-SMAD bindingGO:07041210.8SMAD4, SMAD3, SMAD2, CTNNB1, AXIN1
6transcription regulatory region DNA bindingGO:04421210.8SMAD3, SMAD4, TCF7L2, WNT1, WNT5A, PPARG
7MutLalpha complex bindingGO:03240510.7MSH6, MSH2, MUTYH, PCNA
8mismatched DNA bindingGO:03098310.6PMS1, MLH1, MSH6, MSH2
9MutSalpha complex bindingGO:03240710.5MUTYH, MLH1, PMS2
10protein C-terminus bindingGO:00802210.5DLG4, CTBP1, CTNNB1, TCF4, DLG1, HRAS
11transcription factor bindingGO:00813410.5CTNNB1, SMAD2, SMAD3, TFDP1, DNMT1, TCF7L2
12SMAD bindingGO:04633210.5TGFBR2, SMAD2, CTNNB1, FKBP1A, AXIN1, BMPR1A
13protein kinase bindingGO:01990110.5CCND1, TP53, PTEN, DLG1, SMAD3, ELAVL1
14protein domain specific bindingGO:01990410.4WNT5A, WNT1, TFDP1, PPARA, CTNND1, CTBP1
15retinoic acid bindingGO:00197210.4UGT2B7, UGT2B4, UGT2B15, UGT1A6, UGT1A4, UGT1A3
16glucuronosyltransferase activityGO:01502010.4UGT2B7, UGT2B4, UGT2B15, UGT1A6, UGT1A4, UGT1A3
17steroid hormone receptor activityGO:00370710.3NR5A1, PPARD, PPARA, PPARG, ESR2, HNF4A
18ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activityGO:00487910.2NR5A1, PPARD, PPARA, PPARG, ESR2, HNF4A
19mitogen-activated protein kinase kinase bindingGO:03143410.2DLG1, MAP3K1, BRAF, PIN1
20ubiquitin protein ligase bindingGO:03162510.1SMAD3, SMAD2, TP53, GSK3B, AXIN2, AXIN1
21sequence-specific DNA binding transcription factor activityGO:00370010.1CTNNB1, PPARG, PPARA, PPARD, SMAD2, SMAD3
22double-stranded DNA bindingGO:00369010.0EGFR, SMAD3, SMAD2, NR5A1, CTNNB1, MSH6
23protein phosphatase bindingGO:01990310.0EGFR, CTNND1, CTNNB1, IQGAP1, CDH1, CDH2
24protein homodimerization activityGO:0428039.5JUP, CAT, HNF1A, HNF4A, PTGS2, PPP2R4
25identical protein bindingGO:0428029.4DVL1, EGFR, SMAD4, TP53, GLUL, MAP3K1
26protein heterodimerization activityGO:0469829.1BAX, INHBA, HNF1A, TP53, PPP2R4, EGFR
27enzyme bindingGO:0198998.9AXIN2, MSH2, CCND1, CAT, ESR2, TP53
28protein bindingGO:0055155.1SRC, ACP1, ELAVL1, TIMP3, DVL1, TGFA

Sources for Familial Adenomatous Polyposis

2CDC
11FMA
18HMDB
19ICD9CM
20KEGG
24MeSH
25MGI
27NCIt
28NDF-RT
31NINDS
32Novoseek
33OMIM
35PubMed
36QIAGEN
43UMLS