Summaries for Fibrosis

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44Wikipedia, 22MalaCards
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Wikipedia: Fibrosis is the formation of excess fibrous connective tissue in an organ or tissue in a reparative or...44 more...

MalaCards: Fibrosis is related to carcinoma and cystic fibrosis. An important gene associated with Fibrosis is CFTR (cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)), and among its related pathways are eNOS Signaling and ERK Signaling. The drug potassium para-aminobenzoate and the compounds estrogen and copper have been mentioned in the context of this disorder. Affiliated tissues include brain, skin and liver, and related mouse phenotypes are mortality/aging and digestive/alimentary.

Aliases & Descriptions for Fibrosis

Sources:
7diseasecard, 43UMLS
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fibrosis 7 43

Related Diseases for Fibrosis

Sources:
13GeneCards, 14GeneDecks
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Diseases related to fibrosis by text searches and GeneDecks gene sharing:

(show top 50)    (show all 1038)
idRelated DiseaseScoreTop Affiliating Genes
1carcinoma197.5PIK3CA, PIAS3, PIK3CG, PIN1, PI3, KL
2cystic fibrosis190.3PIK3CG, PI3, PDE3A, PDE4A, RECK, REG1A
3pancreatitis165.2PIK3CA, PIK3CG, PIN1, PI3, LRG1, KL
4neuronitis153.9PIK3CA, PIK3CG, PIN1, KLF6, NCF2, PDE3A
5leukemia152.1PIK3CA, PIK3CG, PIN1, KLF6, NCF2, NCOA3
6prostatitis151.6PIK3CA, PIAS3, PIK3CG, PIN1, WDR19, KL
7adenocarcinoma146.5PIK3CA, PIK3CG, PIN1, WDR19, LRG1, KLF6
8melanoma129.1PIK3CA, PIK3CG, PI3, KL, KLF6, NCOA3
9hepatocellular carcinoma128.6PIK3CA, PIK3CG, PIN1, KL, KLF6, NCOA3
10thyroiditis128.6PIK3CA, PIK3CG, PIN1, NCOA3, PDE4A, RECK
11rheumatoid arthritis124.5PIK3CG, PIN1, KL, PDE4A, RECK, RELA
12pulmonary fibrosis117.5NCF1, NCF2, RETNLB, VWF, VTN, SFTPA1
13gastric cancer117.4PIK3CA, PIK3CG, PIN1, KLF6, NCOA3, RECK
14hypertension117.4PIK3CG, LRG1, KL, KLF6, PDE3A, PDE4A
15hypoxia116.3PIK3CA, PIK3CG, RGCC, PDE4A, RECK, RELA
16cholesterol116.1PIK3CA, PIK3CG, KL, NCF2, NCOA3, RECK
17atherosclerosis115.2PIK3CG, PI3, KL, NCF1, NCF2, PDE4A
18esophagitis110.7PIK3CA, PIK3CG, PIN1, KLF6, NCOA3, PDE4A
19cervicitis109.3PIK3CA, PIK3CG, PIN1, KL, PDE4A, RECK
20alzheimer's disease108.9PIK3CA, PIK3CG, PIN1, KLF6, NCF2, PDE4A
21diabetes mellitus108.6PIK3CA, PIK3CG, PI3, PDE4A, RECK, REG1A
22retinitis106.1PIK3CA, PIK3CG, KLF6, PDE4A, SGK1, CNR1
23colon cancer106.1PIK3CA, PIK3CG, KLF6, RGCC, PDE4A, RECK
24pneumonia105.8PI3, KL, PDE4A, RELA, VTN, SFTPA1
25tuberculosis103.7PIK3CG, NCF1, RELA, WASL, SFTPA1, SFTPA2
26obesity101.6PIK3CA, PIK3CG, NCOA3, RECK, REG3A, RELA
27breast carcinoma101.2PIK3CA, PIK3CG, PI3, NCOA3, RECK, CNR2
28nephropathy100.4LRG1, REG1A, RELA, REN, RETN, SGK1
29peritonitis99.2LRG1, REG1A, RELA, REN, SGK1, KIT
30pulmonary disease98.9PIK3CG, PIN1, PI3, NCF2, NCOA3, PDE4A
31ischemia97.6PIK3CA, PIK3CG, PDE4A, RELA, REN, RETN
32inflammatory bowel disease96.0PDE4A, REG3A, RELA, RETN, RETNLB, KIT
33lupus erythematosus93.3PIK3CG, NCF2, RECK, RETN, VWF, VTN
34myocardial infarction93.1PIK3CG, PI3, PDE4A, RECK, REN, RETN
35myeloid leukemia86.4PIK3CA, PIK3CG, PIN1, KLF6, NCOA3, RECK
36insulin resistance84.4PIK3CA, PIK3CG, RELA, REN, RETN, RETNLB
37gonococcal synovitis82.9PIK3CA, PIK3CG, PI3, PDE4A, RECK, REG1A
38lung carcinoma78.3PIK3CA, PIK3CG, KLF6, RECK, SFTPB, SFTPD
39dermatitis78.1PI3, PDE4A, RELA, CNR1, KITLG, SFTPD
40blindness76.3PIK3CG, PDE4A, REN, CNR1, VWF, RBP4
41influenza74.7PIK3CA, PIK3CG, RECK, RELA, VTN, SFTPA1
42sarcoidosis72.3VTN, SFTPD, SELE, SELL, SELP, SERPINA3
43ovarian cancer72.0PIK3CA, PIK3CG, KLF6, RGCC, NCF1, NCOA3
44glomerulonephritis71.9REN, SGK1, KIT, KITLG, VWF, VTN
45cerebritis71.8PIK3CG, KLF6, NCF1, PDE4A, REG1A, RELA
46copd71.2PDE4A, RELA, VWF, SFTPB, SFTPD, GCLC
47lung adenocarcinoma69.3PIK3CA, PIK3CG, LRG1, KLF6, VWF, SFTPB
48rhinitis66.8PIK3CG, PDE4A, RELA, RETN, KITLG, SFTPA1
49neuropathy65.6PDE4A, REN, RETN, CNR1, VWF, BTD
50hyperglycemia65.4PIK3CA, PIK3CG, RETN, SGK1, CNR1, VWF

Graphical network of the top 20 diseases related to fibrosis:



Graphical network of diseases related to fibrosis

Clinical Features for Fibrosis

Drugs & Therapeutics for Fibrosis

Sources:
4CenterWatch, 29NIH Clinical Center, 5ClinicalTrials, 43UMLS, 28NDF-RT
See all sources

Approved drugs:

Search CenterWatch for fibrosis

Drug clinical trials:

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Inferred drug relations via UMLS/NDF-RT:

43 28 potassium para-aminobenzoate

Genetic Tests for Fibrosis

Anatomical Context for Fibrosis

Sources:
22MalaCards
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MalaCards organs/tissues related to fibrosis:

22
Brain, Skin, Liver, Kidney, Lung, Spinal cord, Ovary, Uterus, Bone marrow, Whole blood, Thymus, Heart, Smooth muscle, Skeletal muscle, Small intestine, Colon, Adipocyte, Pancreas, Thyroid, Salivary gland, Adrenal gland, Breast, Placenta, Prostate, Testis, Myeloid, Monocytes, T cells, B lymphoblasts, B cells, Endothelial, Fetal brain, Hypothalamus, Cardiac myocytes, Fetal liver, Fetal lung, Trachea, Bronchial epithelium, Fetal thyroid, Pancreatic islet

Phenotypes for genes affiliated with Fibrosis

Sources:
25MGI
See all sources

MGI Mouse Phenotypes related to fibrosis:

25 (show all 29)
idDescriptionMGI Source AccessionScoreTop Affiliating Genes
1mortality/agingMP:0010768INFPIK3CA, , KL, KLF6, RECK, RELA
2digestive/alimentary phenotypeMP:0005381INF, KL, NCOA3, RETNLB, WASL, KIT
3pigmentation phenotypeMP:0001186INFKIT, KITLG, BTD, SERPINC1, NAGLU, BRCA1
4limbs/digits/tail phenotypeMP:0005371INF, KL, RECK, RELA, KIT, KITLG
5integument phenotypeMP:0010771INFPIK3CG, PIN1, KL, KLF6, NCOA3, RECK
6respiratory system phenotypeMP:0005388INFKL, SFRP4, SFTPC, SFTPD, SELL, SELP
7hematopoietic system phenotypeMP:0005397INFKLF6, KIT, PCNA, SERPINB1, BRCA1, VHL
8endocrine/exocrine gland phenotypeMP:000537918.8KL, REG1A, WASL, SEC61A1, SELL, SERPINE2
9craniofacial phenotypeMP:0005382INF, NCOA3, KIT, KITLG, NAGLU, MYO6
10liver/biliary system phenotypeMP:0005370INFKLF6, NCOA3, RECK, RETN, KIT, GCLC
11nervous system phenotypeMP:0003631INF, KL, PDE4A, RECK, RELA, REN
12behavior/neurological phenotypeMP:0005386INFPIK3CA, KL, NCOA3, REN, CNR1, KIT
13reproductive system phenotypeMP:0005389INFPIK3CA, KLF6, NCOA3, PDE3A, REG1A, REN
14vision/eye phenotypeMP:0005391INFPIK3CA, PIN1, , RELA, KIT, KITLG
15skeleton phenotypeMP:0005390INFPIK3CG, , RECK, RELA, CNR1, KIT
16growth/size phenotypeMP:0005378INFPIK3CA, PIK3CG, PIN1, KL, KLF6, NCOA3
17muscle phenotypeMP:0005369INFPIK3CA, PIK3CG, , KL, NCOA3, RELA
18embryogenesis phenotypeMP:0005380INFPIK3CA, , KLF6, NCOA3, RECK, WASL
19hearing/vestibular/ear phenotypeMP:0005377INF, NCOA3, KIT, KITLG, NAGLU, VDR
20normal phenotypeMP:0002873INFPDE3A, RELA, REN, WASL, VTN, GCLC
21cardiovascular system phenotypeMP:0005385INFPIK3CA, PIK3CG, KL, KLF6, PDE4A, RECK
22tumorigenesisMP:0002006INFPIK3CA, NCOA3, KIT, KITLG, SFTPC, SELL
23immune system phenotypeMP:0005387INFKL, NCOA3, PDE4A, REN, RETNLB, CNR2
24no phenotypic analysisMP:0003012INFSGK1, CNR1, SFTPC, PCNA, SERPINE2, VEGFA
25cellular phenotypeMP:0005384INFPIK3CA, PIK3CG, PIN1, , KL, KLF6
26adipose tissue phenotypeMP:0005375INFPIK3CA, KL, NCOA3, RETN, CNR1, SEC61A1
27homeostasis/metabolism phenotypeMP:0005376INFPIK3CA, PIK3CG, KL, NCOA3, REG1A, REG3A
28other phenotypeMP:0005395INFKL, RECK, CNR1, SERPINH1, RARA, BLOC1S6
29renal/urinary system phenotypeMP:0005367INFKL, NCOA3, REN, SGK1, KIT, SFRP4

Publications for genes affiliated with Fibrosis

Sources:
35PubMed
See all sources

Articles related to fibrosis:

(show top 50)    (show all 3770)
idTitleAuthorsYearAffiliating Genes
1An association study on contrasting cystic fibrosis e ndophenotypes recognizes KRT8 but not KRT18 as a modifier of cystic fibrosis di sease severity and CFTR mediated residual chloride secretion. (21548936)Stanke F.... TA1mmler B.2011KRT18, KRT8
2Scraping fibrosis: UMODulating renal fibrosis. (21546974)Eddy A.A.2011UMOD
3Transient receptor potential canonical channel 6 link s Ca2+ mishandling to cystic fibrosis transmembrane conductance regulator chann el dysfunction in cystic fibrosis. (20203293)Antigny F.... Vandebrouck C.2011CFTR, TRPC6
4The cystic fibrosis-causing mutation deltaF508 affect s multiple steps in cystic fibrosis transmembrane conductance regulator biogene sis. (20667826)Thibodeau P.H.... Thomas P.J.2010CFTR
5Lack of correlation between pulmonary disease and cys tic fibrosis transmembrane conductance regulator dysfunction in cystic fibrosis : a case report. (20420703)Levy H.... Colin A.A.2010CFTR
6Cystic fibrosis transmembrane conductance regulator m utation spectrum in patients with cystic fibrosis in Tunisia. (19715466)Fredj S.H.... Claustres M.2009CFTR
7Insulin therapy to improve BMI in cystic fibrosis-rel ated diabetes without fasting hyperglycemia: results of the cystic fibrosis rel ated diabetes therapy trial. (19592632)Moran A.... Allen H.2009INS
8Unique mutations of the cystic fibrosis transmembrane conductance regulator gene of three cases of cystic fibrosis in Nagasaki, Japa n. (19652440)Izumikawa K.... Kohno S.2009CFTR
9Serum fibrosis marker levels decrease after successfu l antiviral treatment in chronic hepatitis C patients with advanced fibrosis. (19068241)Fontana R.J.... Su G.L.2009MMP1
10Hepatitis C virus therapy in liver transplant recipie nts: response predictors, effect on fibrosis progression, and importance of the initial stage of fibrosis. (19025933)Roche B.... Samuel D.2008IFNA1
11Relationship of serum fibrosis markers with liver fibrosis stage and collagen content in patients with advanced chronic hepatitis C. (18175357)Fontana R.J.... Wright E.C.2008MMP1, TIMP1
12Serum adiponectin is increased in advancing liver fibrosis and declines with reduction in fibrosis in chronic hepatitis B. (17462782)Hui C.K.... Lau G.K.2007ADIPOQ
13Topical cystic fibrosis transmembrane conductance regulator gene replacement for cystic fibrosis-related lung disease. (17443603)Lee T.... Southern K.W.2007CFTR
14Pravastatin Inhibits the Rho/CCN2/extracellular matrix cascade in human fibrosis explants and improves radiation-induced intestinal fibrosis in rats. (17875761)Haydont V.... Vozenin-Brotons M.C.2007CTGF, RHOD
15The NAFLD fibrosis score: a noninvasive system that identifies liver fibrosis in patients with NAFLD. (17393509)Angulo P.... Day C.P.2007ALB
16Differential sensitivity of the cystic fibrosis (CF)-associated mutants G551D and G1349D to potentiators of the cystic fibrosis transmembrane conductance regulator (CFTR) Cl- channel. (16311240)Cai Z.... Sheppard D.N.2006CFTR
17Progression of fibrosis in hepatitis C with and without schistosomiasis: correlation with serum markers of fibrosis. (16557547)Kamal S.M.... Afdhal N.H.2006BMP6
18Patients with cystic fibrosis managed at the cystic fibrosis units of Madrid: cross-sectional study of 387 subjects (15171831)Garcia Hernandez G.... Prados C.2004CFTR
19Free secretory component from cystic fibrosis sputa d isplays the cystic fibrosis glycosylation phenotype. (14597481)Marshall L.J.... Shute J.K.2004IL8
20Cystic fibrosis transmembrane conductance regulator (CFTR)-mediated residual chloride secretion does not protect against early chronic Pseudomonas aeruginosa infection in F508del homozygous cystic fibrosis patients. (14605249)Derichs N.... Ballmann M.2004CFTR
21Cytokine regulation of periportal fibrosis in humans infected with Schistosoma mansoni: IFN-gamma is associated with protection against fibrosis and TNF-alpha with aggravation of disease. (12097398)Henri S.... Dessein A.J.2002TNF, IFNG
22Tyrosine kinase c-Src constitutes a bridge between cystic fibrosis transmembrane regulator channel failure and MUC1 overexpression in cystic fibrosis. (11872746)Gonzalez-Guerrico A.M.... Santa-Coloma T.A.2002SRC, CFTR, MUC1
23Differences in the fibrogenic response after transfer of active transforming growth factor-beta1 gene to lungs of 'fibrosis-prone' and 'fibrosis-resistant' mouse strains. (12151305)Kolb M.... Gauldie J.2002TGFB1
24Identification of mutation in the gene cystic fibrosis transmembrane regulator (CFTR) in Chilean patients with cystic fibrosis (11680956)Repetto G.... Foradori A.2001CFTR
25Identification of novel mutations in Arabs with cystic fibrosis and their impact on the cystic fibrosis transmembrane regulator mutation detection rate in Arab populations. (10834512)Kambouris M.... Meyer B.F.2000CFTR
26Cystic fibrosis transmembrane conductance regulator does not affect neutrophil migration across cystic fibrosis airway epithelial monolayers. (10751364)Pizurki L.... Suter S.2000CFTR
27Autocrine overexpression of CTGF maintains fibrosis: RDA analysis of fibrosis genes in systemic sclerosis. (10942593)Shi-wen X.... Abraham D.J.2000CTGF
28Expression of cystic fibrosis transmembrane conductance regulator in liver tissue from patients with cystic fibrosis. (10915740)Kinnman N.... Hultcrantz R.2000CFTR
29Restoration of bacterial killing activity of human respiratory cystic fibrosis cells through cationic vector-mediated cystic fibrosis transmembrane conductance regulator gene transfer. (10466626)Biffi A.... Conese M.1999CFTR
30Abnormal expression of the cystic fibrosis transmembrane regulator in chronic sinusitis in cystic fibrosis and non-cystic fibrosis patients. (10378526)Coltrera M.D.... Gown A.M.1999CFTR
31Expression of delta F508 cystic fibrosis transmembrane conductance regulator protein and related chloride transport properties in the gallbladder epithelium from cystic fibrosis patients. (10347100)Dray-Charier N.... Housset C.1999CFTR
32Role and interaction of connective tissue growth factor with transforming growth factor-beta in persistent fibrosis: A mouse fibrosis model. (10457363)Mori T.... Takehara K.1999TGFB1, TGFB3, TGFB2
33Recombinant DNase in cystic fibrosis: a protocol for targeted introduction through n-of-1 trials. Scottish Cystic Fibrosis Group. (10836333)BAPllert F.G.... Innes J.A.1999APEX1
34The ROMK-cystic fibrosis transmembrane conductance re gulator connection: new insights into the relationship between ROMK and cystic fibrosis transmembrane conductance regulator channels. (9442363)Ho K.1998KCNJ1
35A mutation in the cystic fibrosis transmembrane conductance regulator gene associated with elevated sweat chloride concentrations in the absence of cystic fibrosis. (9499426)Mickle J.E.... Cutting G.R.1998CFTR
36Detection of five novel mutations of the cystic fibrosis transmembrane regulator (CFTR) gene in Pakistani patients with cystic fibrosis: Y569D, Q98X, 296+12(T>C), 1161delC and 621+2(T>C). (9482579)Malone G.... Super M.1998CFTR
37Cystic-fibrosis-like disease unrelated to the cystic fibrosis transmembrane conductance regulator. (9654209)Mekus F.... Veeze H.J.1998CFTR
38Identification of common cystic fibrosis mutations in African-Americans with cystic fibrosis increases the detection rate to 75%. (9150159)Macek M.... Cutting G.R.1997CFTR
39Repeat administration of an adenovirus vector encodin g cystic fibrosis transmembrane conductance regulator to the nasal epithelium o f patients with cystic fibrosis. (8617884)Zabner J.... Standaert T.A.1996CFTR
40Cytokines in human renal interstitial fibrosis. I. Interleukin-1 is a paracrine growth factor for cultured fibrosis-derived kidney fibroblasts. (7752582)Lonnemann G.... Dinarello C.A.1995IL1B
41Neonatal screening for cystic fibrosis: result of a pilot study using both immunoreactive trypsinogen and cystic fibrosis gene mutation analyses. (8530001)FAcrec C.... Roussey M.1995CFTR
42Identification of the M1101K mutation in the cystic fibrosis transmembrane conductance regulator (CFTR) gene and complete detection of cystic fibrosis mutations in the Hutterite population. (7680525)Zielenski J.... Morgan K.1993CFTR
43Mutations and sequence variations detected in the cystic fibrosis transmembrane conductance regulator (CFTR) gene: a report from the Cystic Fibrosis Genetic Analysis Consortium. (1284534)Tsui L.-C.1992CFTR
44Extensive posttranscriptional deletion of the coding sequences for part of nucleotide-binding fold 1 in respiratory epithelial mRNA transcripts of the cystic fibrosis transmembrane conductance regulator gene is not associated with the clinical manifestations of cystic fibrosis. (1381723)Chu C.S.... Crystal R.G.1992CFTR
45Cystic fibrosis transmembrane conductance regulator and the etiology and pathogenesis of cystic fibrosis. (1378801)McIntosh I.... Cutting G.R.1992CFTR
46Abnormal localization of cystic fibrosis transmembrane conductance regulator in primary cultures of cystic fibrosis airway epithelia. (1379244)Denning G.M.... Welsh M.J.1992RECK
47Expression of the cystic fibrosis transmembrane conductance regulator gene in the respiratory tract of normal individuals and individuals with cystic fibrosis. (1713683)Trapnell B.C.... Crystal R.G.1991CFTR
48Cystic fibrosis with three mutations in the cystic fibrosis transmembrane conductance regulator gene. (1715308)DAPrk T.... TA1mmler B.1991CFTR
49Sequence analysis of the cystic fibrosis gene in patients with disseminated bronchiectatic lung disease. Application in the identification of a cystic fibrosis patient with atypical clinical course. (1749205)Poller W.... MA1ller K.M.1991CFTR
50Increased expression of the interleukin-8 gene by alveolar macrophages in idiopathic pulmonary fibrosis. A potential mechanism for the recruitment and activation of neutrophils in lung fibrosis. (1752942)CarrAc P.C.... Riches D.W.1991IL8

Expression for genes affiliated with Fibrosis

Sources:
1BioGPS
See all sources
Expression patterns in normal tissues for genes affiliated with Fibrosis

Pathways for genes affiliated with Fibrosis

Sources:
36QIAGEN, 3Cell Signaling Technology, 20KEGG, 38Reactome, 10EMD Millipore, 37R&D Systems, 41Thomson Reuters
See all sources

Pathways related to fibrosis according to GeneDecks:

(show top 50)    (show all 175)
idPathwayScoreTop Affiliating Genes
1eNOS Signaling36INFKIT, KITLG, LMTK2, BMP1, BMP2, BMP3
2ERK Signaling36INFKIT, KITLG, VEGFC, LMTK2, MYC, BMP1
3Paxillin Interactions36INFKIT, KITLG, VEGFC, LMTK2, BMP1, BMP2
4Angiogenesis3INFRECK, REN, VHL, VEGFC, KDR, ITGAV
5Rac1 Pathway36INFNCF2, KITLG, BMP1, BMP3, BMP4, BMP6
6Integrin Pathway36INFMYC, RAF1, LAMA3, LAMC2, JUN, ITGA1
7MIF Mediated Glucocorticoid Regulation3620.7BMP1, BMP2, BMP3, BMP4, BMP6, BMP7
8Endothelin-1 Signaling Pathway3620.1KIT, LMTK2, MYC, BMP1, BMP2, BMP3
9all-trans-Retinoic Acid Signaling in Brain3619.9BMP1, BMP2, BMP3, BMP4, BMP6, BMP7
10Chagas disease (American trypanosomiasis)2018.5PIK3CA, PIK3CG, RELA, SERPINE1, CHUK, CFLAR
11IL-6 Pathway3618.4PIAS3, BMP1, BMP2, BMP3, BMP4, BMP6
12PGC1Alpha Pathway3617.0BMP1, BMP2, BMP3, BMP4, BMP6, BMP7
13Immune System3817.0SEC61A1, SEC61B, VCAM1, BLMH, LGALS3, MX1
14Measles2015.4PIK3CA, PIK3CG, RELA, CHUK, MX1, MSN
15Jak-STAT signaling pathway2015.4PIK3CA, PIAS3, PIK3CG, MYC, LIFR, BCL2L1
16eIF2 Pathway3615.3KIT, KITLG, VEGFC, BMP1, BMP3, BMP4
17NFAT Signaling and Lymphocyte Interactions3614.9BMP1, BMP2, BMP3, BMP4, BMP6, BMP7
18Amoebiasis2014.8PIK3CA, RELA, SERPINB3, SERPINB1, RAB5A, MUC2
19Metalloproteases in connective tissue degradation1014.6CMA1, LAMA3, LAMC2, CDH1, MMP1, MMP10
20Actin-Based Motility by Rho Family GTPases3614.3WASL, BMP1, BMP3, BMP4, BMP7, UTS2
21NOD-like receptor signaling pathway2014.1RELA, CHUK, IL18, IL1B, IL6, IL8
22Th17 Differentiation3714.1JAK2, CD28, CD4, CD80, IL12B, IL17A
23Inhibition of Matrix Metalloproteinases3614.1RECK, MMP1, MMP10, MMP11, MMP12, MMP13
24Immune response MIF-mediated glucocorticoid regulation1013.7RELA, VCAM1, CHUK, JUN, MMP1, FOS
25PKR Pathway3613.4RELA, CHUK, ATF2, JUN, FOS, MAPK8
26Immune response_IFN gamma signaling pathway4113.2PIK3CA, BRCA1, MYC, CEBPB, ATF2, JAK2
27Th1 Differentiation3713.2JUN, JAK2, CD28, CD4, CD80, FOS
28Immune response_Bacterial infections in normal airways4113.1RELA, CHUK, LBP, CFTR, CD14, IL1B
29Immune response Toll-like receptor (TLR) ligands and common TLR signaling pathway leading to cell proinflammatory response1012.8CHUK, LBP, JUN, CD14, IL11, IL6
30Bacterial infections in CF airways4112.7RELA, SFTPA1, SFTPD, CHUK, MUC1, LBP
31EGF Pathway3612.3MYC, RAF1, RAB5A, CHUK, MUC1, JUN
32Immune response IFN gamma signaling pathway1012.2ATF2, JAK2, IFNG, IFNGR2, CALM1, CAMK2G
33Development Prolactin receptor signaling1011.6PIK3CA, RELA, MYC, RAF1, BCL2, BCL2L1
34Tuberculosis20INFRELA, VDR, RAF1, RAB5A, BCL2, BAX
35Toxoplasmosis20INFPIK3CA, PIK3CG, RELA, BCL2, BCL2L1, CHUK
36p53 Mediated Apoptosis36INFKIT, KITLG, VEGFC, BMP1, BMP2, BMP3
37Cytokine-cytokine receptor interaction20INFKIT, KITLG, VEGFA, VEGFC, BMP2, BMP7
38p70S6K Signaling36INFKIT, KITLG, VEGFC, BMP1, BMP2, BMP3
39Cell adhesion_ECM remodeling41INFVTN, SERPINE2, SERPINE1, VCAN, LAMA3, LAMC2
40MAPK signaling pathway20INFRELA, MYC, RAF1, CHUK, ATF4, ATF2
41Pancreatic Adenocarcinoma36INFKIT, KITLG, VEGFC, LMTK2, BMP1, BMP2
42Pertussis20INFRELA, SFTPA1, JUN, CD14, ITGAM,
43Endocytosis20INFKIT, RAB11B, RAB5A, RAB11A, KDR, FLT1
44Cell adhesion ECM remodeling10INFVTN, SERPINE2, SERPINE1, VCAN, LAMA3, LAMC2
45Antioxidant Action of Vitamin-C36INFNCF1, NCF2, KIT, KITLG, VEGFC, MYO6
46Development VEGF signaling and activation10INFPIK3CA, RELA, SELE, VCAM1, RAF1, KDR
47Estrogen Pathway36INFNCOA3, KIT, KITLG, BRCA1, VEGFC, LMTK2
48SOCS Pathway36INFVEGFC, BMP1, BMP2, BMP3, BMP4, BMP6
49Phagosome20INFNCF1, NCF2, SFTPA1, SFTPD, SEC61A1, SEC61B
50P2Y Receptor Signaling36INFKIT, VEGFC, LMTK2, MYC, RAF1, LIFR

Compounds for genes affiliated with Fibrosis

Sources:
32Novoseek , 18HMDB, 9DrugBank, 42Tocris Bioscience, 34PharmGKB
See all sources

Compounds related to fibrosis according to GeneDecks:

(show top 50)    (show all 523)
idCompoundScoreTop Affiliating Genes
1estrogen32 INFKLF6, NCOA3, RETN, VWF, PCNA, GC
2copper32 18 INFSFTPB, RBP4, SERPINA1, NAGLU, LPA, LIF
3heparan sulfate32 18 INFVTN, GC, SERPINC1, SERPINF2, SERPINE1, VIM
4phospholipid32 INFPDE4A, VWF, SFTPB, SFTPC, SFTPD, RBP4
5adenylate32 INFPIK3CA, PIK3CG, KLF6, PDE3A, PDE4A, SGK1
6iron32 18 INFRECK, KITLG, RBP4, SETD2, SERPINA1, SERPINA3
7glutamate32 INFPIK3CA, SGK1, CNR1, CNR2, VTN, PCNA
8arginine32 INFPIK3CA, NCOA3, PDE4A, RECK, REN, SGK1
9pentoxifylline32 9 9 20.6PDE4A, SELL, SELP, NAGLU, VCAM1, BMP2
1015-deoxy-delta-12,14-prostaglandin j232 17.2PIK3CG, SERPINE1, VEGFA, VCAM1, MYC, BMP6
11methacholine32 9 9 18.8REN, VIP, MPO, CD79A, CD14, CDKN3
12ag 147832 16.6PIK3CA, PIK3CG, SERPINE1, RAF1, MUC5AC, JUN
13doxycycline32 9 9 18.6SFTPB, SFTPC, SCGB1A1, LACTB, CD79A, CDK2
14mifepristone32 42 9 9 19.1PI3, SGK1, LIF, BIRC5, ZFP36, BCL2L1
15phosphatidylserine32 9 9 17.7RECK, VWF, SELE, VIM, LPL, BCL2
16pioglitazone32 9 9 17.5RETN, RBP4, BSG, VEGFA, LPL, VCAM1
17sialic acid32 15.2RECK, RBP4, SELL, SERPINF2, SERPINA3, NAGLU
18pertussis32 15.1PIK3CG, VIP, P2RY2, JUN, ITGA4, FPR1
19rottlerin32 42 16.1PIK3CG, VCAM1, JUN, CD36, CD40LG, CDK1
20enalapril32 9 9 16.8REN, SERPINE1, VIP, NAGLU, BMP6, BMP7
21docetaxel32 34 9 9 17.7KIT, SETD2, BRCA1, VEGFA, VDR, MYC
22raloxifene32 9 9 16.2NCOA3, VWF, SERPINC1, SERPINE1, VDR, BMP2
23atropine32 9 9 16.1PCNA, VIP, UTS2, BCHE, SCT, MME
24fitc32 13.9VWF, PCNA, SELL, BIRC5, LBP, CD14
25ciprofloxacin32 9 9 15.8VIM, VDAC1, LACTB, CEBPB, MMP1, IL18
26leflunomide32 9 9 15.5PCNA, MMP1, MMP3, IL13, IL18R1, IL1R1
27chenodeoxycholic acid32 9 18 9 16.2VDR, CETP, JUN, APOB, MAPK14, CCND1
28vincristine32 34 9 9 16.2RECK, KIT, ATF4, ITGA4, FGF2, ANXA5
29diisopropylfluorophosphate32 13.2SERPINC1, SERPINA1, SERPINE1, SERPINA3, LIF, BCHE
30c-peptide32 13.1RETN, NAGLU, KCNJ11, SCT, LEP, IL7
31ivig32 13.1VWF, SEPSECS, S100A12, IL18R1, IL1RAPL2, IL3
32lactose32 9 9 14.9SELE, SELL, LGALS1, LGALS3, LCT, CFTR
33hirudin32 12.4SELL, SERPINC1, SERPINF2, SCG5, F9, F5
34nitroglycerin32 9 9 13.5ALDH2, TNFRSF11B, SST, ELANE, NPR1
35nmda32 42 INFPIK3CA, PDE4A, CNR1, VIM, LNX1, PARK2
36geldanamycin32 9 9 INFPIK3CG, SETD2, VEGFA, RAF1, BIRC5, PARK2
37groalpha32 INFSELE, VCAM1, MMP13, IL10, IL13, IL17A
38ly29400232 INFPIK3CA, PIK3CG, PI3, RETN, SGK1, VTN
39actinomycin d32 INFPIK3CA, PIK3CG, PDE4A, RETN, SGK1, KIT
40triacylglycerol32 INFRBP4, SERPINE1, LPL, CLPS, SCD, LEP
41ethanol32 34 9 18 9 INFKL, KITLG, SFTPC, GCLC, SERPINA1, LPA
42histamine32 18 INFPIK3CA, PI3, PDE4A, CNR1, KIT, KITLG
43fibrinogen32 INFKLF6, RECK, RETN, VTN, SFTPB, SFTPC
44serine32 INFPIK3CA, PIK3CG, PIN1, PI3, KLF6, PDE4A
45rapamycin32 42 INFPIK3CG, PIN1, SGK1, KIT, KITLG, SELL
46capsaicin32 INFCNR1, SELE, VIP, CMA1, LEP, B3GAT1
47suramin32 9 9 INFRECK, PCNA, VIP, VEGFA, BMP6, RAF1
48chloroquine32 34 9 9 INFKIT, VTN, SERPINC1, BRCA1, BMP6, RAF1
49prostacyclin32 INFPDE4A, REG3A, REN, VWF, VTN, SELE
50ang ii32 INFPIK3CG, REN, VEGFA, LAP3, JAK2, CD36

GO Terms for genes affiliated with Fibrosis

Sources:
12Gene Ontology
See all sources

Cellular components related to fibrosis according to GeneDecks:

(show all 18)
idNameGO IDScoreTop Affiliating Genes
1extracellular regionGO:005576INFLRG1, KL, REG1A, RETN, RETNLB, KITLG
2extracellular spaceGO:005615INFLRG1, KL, REG3A, REN, KIT, KITLG
3membraneGO:016020INFPIK3CG, LRG1, PDE4A, RECK, REN, VHL
4plasma membraneGO:005886INFPIK3CG, KL, RECK, SGK1, CNR1, CNR2
5extracellular matrixGO:03101216.6VWF, VTN, SERPINE2, SERPINE1, LPL, VCAN
6basolateral plasma membraneGO:01632315.9BEST1, KCNQ1, UMOD, P2RY1, P2RY2, P2RY4
7protein complexGO:04323414.9BRCA1, MYC, BMP2, RAB11A, UTRN, S100A1
8Golgi lumenGO:00579614.3VCAN, SDC1, MUC1, MUC2, MUC3A, MUC3B
9platelet alpha granule lumenGO:03109314.2VWF, SERPINF2, SERPINA1, SERPINE1, VEGFA, VEGFC
10membrane raftGO:045121INFSELE, BSG, RAB5A, UMOD, FURIN, JAK2
11external side of plasma membraneGO:009897INFKIT, VWF, SELL, SELP, SEMA7A, VCAM1
12integral to plasma membraneGO:005887INFKL, CNR1, CNR2, SELL, SELP, BPI
13proteinaceous extracellular matrixGO:005578INFPI3, VWF, SERPINA1, VEGFA, VCAN, BMP4
14apical plasma membraneGO:016324INFVAMP3, CLCA4, SCNN1A, SCNN1B, SCNN1G, UMOD
15cytoplasmGO:005737INFPIAS3, PIK3CG, PIN1, KLF6, RGCC, NCF2
16cytosolGO:005829INFPIK3CA, PIK3CG, NCF1, NCF2, PDE3A, PDE4A
17perinuclear region of cytoplasmGO:048471INFPDE4A, GC, SELE, LMNA, LMTK2, MYO6
18cell surfaceGO:009986INFSFRP4, VEGFA, LPL, VCAM1, BMP2, RARA

Biological processes related to fibrosis according to GeneDecks:

(show top 50)    (show all 59)
idNameGO IDScoreTop Affiliating Genes
1positive regulation of transcription from RNA polymerase II promoterGO:045944INFKLF6, NCOA3, RELA, SERPINF2, SERPINE1, BRCA1
2response to hypoxiaGO:001666INFSFTPB, SERPINA1, VEGFA, VCAM1, BMP2, RAF1
3inflammatory responseGO:006954INFPIK3CG, RELA, CNR2, KIT, SELE, SELP
4positive regulation of angiogenesisGO:045766INFSERPINE1, VEGFA, UTS2, KDR, CHI3L1, CD34
5response to drugGO:042493INFNCF2, PDE3A, PDE4A, REN, VEGFC, LPL
6small molecule metabolic processGO:044281INFPIK3CA, PIK3CG, NCOA3, WASL, GCLC, GC
7signal transductionGO:007165INFPDE4A, KIT, KITLG, VEGFC, VDR, RARA
8virus-host interactionGO:019048INFRELA, VIM, VDAC1, VCAM1, KDR, BAX
9positive regulation of cell proliferationGO:008284INFREG1A, KIT, VIP, VEGFA, VEGFC, MYC
10cell-cell signalingGO:00726720.0BMP2, BMP3, S100A9, XCL1, CEACAM6, FZD1
11innate immune responseGO:04508719.9PIK3CG, PIN1, NCF1, NCF2, RELA, SFTPD
12positive regulation of transcription, DNA-dependentGO:04589318.8KLF6, NCOA3, RELA, BRCA1, VHL, MYC
13response to lipopolysaccharideGO:03249617.7NCF2, CNR1, CNR2, SFTPB, SFTPC, SELE
14agingGO:00756817.2KL, NCF2, CNR1, VDR, VCAM1, P2RY1
15extracellular matrix organizationGO:03019816.2RECK, SERPINH1, BMP1, CMA1, LGALS3, FURIN
16cytokine-mediated signaling pathwayGO:01922115.8PIN1, KLF6, RELA, KIT, VCAM1, LIFR
17transforming growth factor beta receptor signaling pathwayGO:00717915.3SERPINE1, MYC, UBC, MSTN, FURIN, JUN
18platelet degranulationGO:00257615.2VWF, SELP, SERPINF2, SERPINA1, SERPINE1, VEGFA
19positive regulation of I-kappaB kinase/NF-kappaB cascadeGO:04312315.0RELA, PARK2, LGALS1, LGALS9, CHUK, UBC
20response to glucocorticoid stimulusGO:05138414.7SFRP4, SFTPB, SFTPC, SERPINE1, BGLAP, BCHE
21elevation of cytosolic calcium ion concentrationGO:00720414.5UTS2, BDKRB1, S1PR3, P2RY1, P2RY2, P2RY4
22positive regulation of ERK1 and ERK2 cascadeGO:07037414.5SEMA7A, SERPINF2, BMP2, BMP4, KDR, CHI3L1
23positive regulation of smooth muscle cell proliferationGO:04866114.4SERPINF2, BMP4, S1PR1, JUN, FLT1, IL13
24regulation of blood pressureGO:00821714.2REN, SGK1, UTS2, LEP, CHGA, CD34
25response to organic cyclic compoundGO:01407014.0NCF2, SELP, SERPINA1, BMP4, UGT1A1, ATF1
26response to ethanolGO:04547113.9CNR1, RBP4, BGLAP, BCL2, CHAT, LCT
27extracellular matrix disassemblyGO:02261713.6CMA1, FURIN, MMP1, MMP10, MMP11, MMP13
28response to estrogen stimulusGO:04362713.6SERPINE1, BRCA1, BGLAP, BCL2, LCT, MSTN
29heart developmentGO:00750713.6PCNA, RBP4, VCAM1, VCAN, BMP2, RAF1
30positive regulation of protein kinase B signaling cascadeGO:05189713.6PIK3CG, CHI3L1, ARRB2, INS, ILK, ANGPT1
31positive regulation of nitric oxide biosynthetic processGO:04542913.6JAK2, INS, IL1B, IFNG, ICAM1, HSP90AA1
32wound healingGO:04206013.4KLF6, RAF1, S100A8, P2RY2, INS, FGF10
33positive regulation of phosphatidylinositol 3-kinase cascadeGO:01406813.2KIT, SELP, KDR, JAK2, FLT1, INS
34positive regulation of MAP kinase activityGO:04340613.2PIK3CG, KITLG, VEGFA, CD40, FLT1, FGFR1
35response to mechanical stimulusGO:00961212.7BMP2, BMP4, BGLAP, CHI3L1, P2RY1, JUN
36negative regulation of cell proliferationGO:008285INFRGCC, SFRP4, SERPINE2, VHL, VDR, BMP2
37cell surface receptor signaling pathwayGO:007166INFBSG, LIFR, LEPR, P2RY1, MPL, JMJD6
38immune responseGO:006955INFCNR2, VTN, SEMA7A, BPI, BMP6, RAG1
39positive regulation of MAPK cascadeGO:043410INFKIT, LIF, KDR, LEP, CD36,
40positive regulation of cell migrationGO:030335INFVEGFA, BMP2, KDR, S1PR1, FURIN, JAK2
41apoptotic processGO:006915INFSGK1, VIM, BRCA1, VDAC1, LMNA, RASSF6
42chemotaxisGO:006935INFS100A8, S100A9, FPR1, FGF2, IL4, ENPP2
43positive regulation of protein phosphorylationGO:001934INFPIN1, VEGFA, BMP2, BMP4, P2RY1, FZD1
44anti-apoptosisGO:006916INFPIK3CA, RELA, GCLC, VHL, BIRC5, BCL2
45positive regulation of peptidyl-tyrosine phosphorylationGO:050731INFKITLG, VTN, VEGFA, LIF, JAK2, CD36
46positive regulation of apoptotic processGO:043065INFCNR1, SFRP4, BMP2, BMP4, CLU, BAX
47blood coagulationGO:007596INFPIK3CA, PIK3CG, PDE3A, VWF, SELL, SELP
48negative regulation of apoptotic processGO:043066INFPIK3CG, PDE3A, RELA, SERPINE1, VEGFA, MYC
49angiogenesisGO:001525INFPIK3CA, PIK3CG, SETD2, SERPINE1, VEGFA, VEGFC
50platelet activationGO:030168INFPIK3CA, PIK3CG, VWF, SELP, SERPINF2, SERPINA1

Molecular functions related to fibrosis according to GeneDecks:

(show all 15)
idNameGO IDScoreTop Affiliating Genes
1protein bindingGO:005515INFPIK3CA, PIAS3, PIK3CG, PIN1, RGCC, NCF1
2ATP bindingGO:005524INFPIK3CA, PIK3CG, SGK1, KIT, KIF21A, KIF16B
3protease bindingGO:002020INFKIT, VWF, SELL, SERPINC1, SERPINF2, SERPINA1
4receptor bindingGO:00510219.4REN, SERPINE2, SERPINE1, LPL, VCP, BMP2
5cytokine activityGO:00512518.5KITLG, VEGFA, BMP1, BMP2, BMP3, BMP4
6chemokine activityGO:00800915.0XCL1, IL8, CCL4, CCL7, CCL27, CCL22
7hormone activityGO:00517914.6KL, RETN, RETNLB, VIP, UTS2, SCT
8heme bindingGO:02003714.4LPO, MPO, JAK2, FECH, FADS1, FADS2
9calcium ion bindingGO:005509INFRCN1, GCA, VCAN, BMP1, UTRN, BGLAP
10protein heterodimerization activityGO:046982INFGCA, VEGFA, MYC, BMP2, BMP6, RARA
11protein homodimerization activityGO:042803INFKIT, VWF, SFTPC, GCA, SERPINF2, NAGA
12growth factor activityGO:008083INFREG1A, KITLG, VEGFA, VEGFC, BMP1, BMP2
13integrin bindingGO:005178INFVWF, VTN, SEMA7A, VCAM1, KDR, ITGA1
14heparin bindingGO:008201INFVTN, SELL, SELP, SERPINE2, SERPINC1, VEGFA
15enzyme bindingGO:019899INFPIAS3, BRCA1, VHL, RARA, BIRC5, BCHE

Sources for Fibrosis

2CDC
11FMA
18HMDB
19ICD9CM
20KEGG
24MeSH
25MGI
27NCIt
28NDF-RT
31NINDS
32Novoseek
33OMIM
35PubMed
36QIAGEN
43UMLS