Sources: 12Gene Ontology See all sources |
Cellular components related to gastritis according to GeneDecks:| id | Name | GO ID | Score | Top Affiliating Genes | | 1 | integral to plasma membrane | GO:005887 | 10.2 | HLA-DRB1, HLA-DQA1, HLA-C, HLA-B, HLA-A, ERBB3 | | 2 | cell surface | GO:009986 | 10.1 | TNF, NOD2, ABCB1, HBEGF, TLR2, TGFA | | 3 | Golgi lumen | GO:005796 | 10.1 | TGFB1, DEFB1, DEFB4A, DEFA5, INS, MUC6 | | 4 | secretory granule | GO:030141 | 9.6 | DEFA5, LTF, GHRL, GKN1, HSPD1, APOA1 | | 5 | membrane raft | GO:045121 | 9.3 | TNF, EGFR, TLR4, PRNP, SI, IKBKB | | 6 | extracellular region | GO:005576 | 8.9 | IFNG, APOA1, IL8, IL6, IL5, IL3 | | 7 | external side of plasma membrane | GO:009897 | 8.5 | ADA, AQP4, IL4, IL17A, ITGAX, CD83 | | 8 | plasma membrane | GO:005886 | 8.0 | HLA-DQA1, HLA-DQB1, HLA-DRB1, TNF, PTGS1, CYSLTR1 | | 9 | extracellular space | GO:005615 | 7.5 | SST, AMH, IFNG, CCL5, CCL19, CCK |
Biological processes related to gastritis according to GeneDecks: (show top 50)
(show all 51)
| id | Name | GO ID | Score | Top Affiliating Genes | | 1 | chemotaxis | GO:006935 | 11.4 | CYSLTR1, DEFB1, DEFB4A, CXCL1, CXCL2, CXCL5 | | 2 | inflammatory response | GO:006954 | 11.3 | IKBKB, ADORA2A, LY96, CALCA, TP73, TNF | | 3 | positive regulation of interleukin-6 production | GO:032755 | 11.3 | NOD2, TLR2, TLR4, TLR9, NOD1, TNF | | 4 | positive regulation of ERK1 and ERK2 cascade | GO:070374 | 11.3 | TNF, NOD1, NOD2, TLR4, TFF2, CCL19 | | 5 | positive regulation of JNK cascade | GO:046330 | 11.2 | TLR9, TLR4, NOD2, NOD1, TNF, CCL19 | | 6 | digestion | GO:007586 | 11.1 | PGC, MUC5AC, CCKBR, GKN1, SST, TFF1 | | 7 | lipopolysaccharide-mediated signaling pathway | GO:031663 | 11.1 | LY96, TGFB1, TLR4, TLR2, NFKBIA, TNF | | 8 | defense response to Gram-positive bacterium | GO:050830 | 11.0 | TLR2, LTA, NOD1, TNF, MBL2, IL6 | | 9 | activation of MAPK activity | GO:000187 | 11.0 | NOD1, NOD2, TLR4, TGFA, SOD1, PTPN11 | | 10 | response to glucocorticoid stimulus | GO:051384 | 10.9 | IL10, IL1B, IL1RN, IL6, FAS, CCL5 | | 11 | innate immune response | GO:045087 | 10.9 | NOD2, NFKBIA, RNASE7, TLR2, TLR4, TLR5 | | 12 | positive regulation of I-kappaB kinase/NF-kappaB cascade | GO:043123 | 10.9 | NOD1, NOD2, TLR4, TLR9, ADIPOQ, TNF | | 13 | immune response | GO:006955 | 10.9 | KIR2DS5, MADCAM1, CCR6, CCL20, CCL25, CCL28 | | 14 | defense response to bacterium | GO:042742 | 10.9 | LTF, TLR4, TLR9, DEFB1, DEFB4A, DEFA5 | | 15 | response to lipopolysaccharide | GO:032496 | 10.8 | PTGS2, LTA, TLR4, NKX2-1, LY96, CCR7 | | 16 | response to oxidative stress | GO:006979 | 10.8 | KRT1, TLR4, PRNP, OGG1, GAB1, PTGS1 | | 17 | positive regulation of interleukin-8 production | GO:032757 | 10.7 | ADIPOQ, TLR9, TLR5, TLR4, TLR2, CALCA | | 18 | positive regulation of interleukin-10 production | GO:032733 | 10.7 | TLR9, TLR4, NOD2, HSPD1, IL4, CD83 | | 19 | response to organic cyclic compound | GO:014070 | 10.7 | TIMP3, PTGS2, ICAM1, AMH, CCL19, IL4 | | 20 | aging | GO:007568 | 10.7 | ADA, SI, TGFB1, TIMP3, TIMP1, PTGS1 | | 21 | cellular defense response | GO:006968 | 10.7 | KIR2DL4, BCL10, IL4, CCR6, LY96, ADORA2A | | 22 | positive regulation of dendritic cell antigen processing and presentation | GO:002606 | 10.6 | CCL21, CCR7, CCL19, NOD1, NOD2 | | 23 | positive regulation of NF-kappaB import into nucleus | GO:042346 | 10.6 | TLR9, TLR4, TLR2, TNF, CCL19, IL1B | | 24 | negative regulation of cell proliferation | GO:008285 | 10.6 | PTGES, PTGS2, SST, PDX1, TGFB1, CXCL1 | | 25 | positive regulation of interferon-gamma production | GO:032729 | 10.5 | TLR4, LTA, TNF, HSPD1, IL2, IL1B | | 26 | regulation of blood pressure | GO:008217 | 10.5 | CHGA, CD34, CALCA, PTGS2, PTGS1, ACE | | 27 | positive regulation of tumor necrosis factor production | GO:032760 | 10.4 | CCL19, IFNG, NOD1, NOD2, TLR2, TLR4 | | 28 | positive regulation of interleukin-12 production | GO:032735 | 10.4 | TLR9, TLR4, TLR2, HSPD1, IFNG, CCL19 | | 29 | humoral immune response | GO:006959 | 10.3 | LTF, LTA, TNF, IFNG, CCR6, IL6 | | 30 | positive regulation of NF-kappaB transcription factor activity | GO:051092 | 10.2 | NOD1, NOD2, NFKBIA, TLR2, TLR4, TLR9 | | 31 | response to ethanol | GO:045471 | 10.2 | ADIPOQ, BCL2, S100A8, MMP9, MGMT, IL4 | | 32 | negative regulation of growth of symbiont in host | GO:044130 | 10.1 | TLR2, LTA, TNF, IFNG, MBL2, IL10 | | 33 | positive regulation of T cell proliferation | GO:042102 | 10.1 | IFNG, CCL5, CCL19, IL6, IL4, IL1B | | 34 | leukocyte cell-cell adhesion | GO:007159 | 10.0 | CALCA, ICAM1, CCL5, CD40LG, CD209, VCAM1 | | 35 | regulation of immune response | GO:050776 | 10.0 | KIR2DS2, KIR2DS1, KIR2DL2, VCAM1, CD40LG, CD34 | | 36 | positive regulation of mitosis | GO:045840 | 10.0 | EGF, TNF, IL1B, IL1A, MET, INS | | 37 | positive regulation of B cell proliferation | GO:030890 | 9.9 | ADA, BCL2, CD40LG, MIF, IL2, IL4 | | 38 | cell-cell signaling | GO:007267 | 9.9 | CCL5, AMH, CALCA, GHRH, TXN, SST | | 39 | interferon-gamma-mediated signaling pathway | GO:060333 | 9.9 | PTPN11, HLA-DRB1, HLA-DQB1, HLA-DQA1, HLA-C, HLA-B | | 40 | cell cycle arrest | GO:007050 | 9.9 | TP53, TP53INP1, TP73, TGFB1, PRNP, IFNG | | 41 | anti-apoptosis | GO:006916 | 9.9 | IKBKB, GHRL, TNF, TERT, NFKBIA, TGFA | | 42 | positive regulation of protein kinase B signaling cascade | GO:051897 | 9.9 | TGFB1, HBEGF, EGFR, TNF, CCL19, CCR7 | | 43 | response to hypoxia | GO:001666 | 9.8 | ERCC2, TNF, NOS2, LTA, TLR4, TGFB1 | | 44 | cytokine-mediated signaling pathway | GO:019221 | 9.8 | HLA-B, HLA-C, HLA-DQA1, HLA-DQB1, HLA-DRB1, PTPN11 | | 45 | positive regulation of peptidyl-tyrosine phosphorylation | GO:050731 | 9.6 | CCK, TP53, TLR4, ADIPOQ, IL6, IL5 | | 46 | response to toxin | GO:009636 | 9.5 | TLR4, IKBKB, CCL5, CCL3, FAS, MGMT | | 47 | response to drug | GO:042493 | 9.3 | XRCC1, MSH2, ATP4A, CDH1, MMP7, MMP9 | | 48 | positive regulation of nitric oxide biosynthetic process | GO:045429 | 9.3 | TLR4, TLR2, EGFR, PTGS2, TNF, ICAM1 | | 49 | positive regulation of cell proliferation | GO:008284 | 8.5 | GHRH, ODC1, PDX1, EGF, EGFR, TIMP1 | | 50 | negative regulation of apoptotic process | GO:043066 | 8.3 | CAT, GHRL, ERCC2, TP53, TNF, KRT18 |
Molecular functions related to gastritis according to GeneDecks: (show all 8)
| id | Name | GO ID | Score | Top Affiliating Genes | | 1 | chemokine activity | GO:008009 | 11.0 | CXCL5, CXCL2, CXCL1, CCL5, CCL19, CCL21 | | 2 | growth factor activity | GO:008083 | 10.1 | AMH, GKN1, EGF, HBEGF, TGFA, TGFB1 | | 3 | enzyme binding | GO:019899 | 9.4 | CYP2E1, NOD2, NFKBIA, EGFR, TGFB1, SLPI | | 4 | cytokine activity | GO:005125 | 9.3 | IL4, IL5, IL6, IFNG, TNF, LTA | | 5 | hormone activity | GO:005179 | 9.2 | GAST, ADIPOQ, SST, CALCA, AMH, CCK | | 6 | transmembrane signaling receptor activity | GO:004888 | 9.0 | TLR4, TLR2, EGFR, ERBB2, ERBB3, ICAM1 | | 7 | identical protein binding | GO:042802 | 8.7 | TNF, NOD1, NFKBIA, SKP2, EGFR, SYP | | 8 | protein binding | GO:005515 | INF | ALB, TERT, PTGES3, PTPN11, CTTN, NOD1 |
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