Sources: 12Gene Ontology See all sources |
Cellular components related to graft versus host disease according to GeneDecks: (show all 18)
| id | Name | GO ID | Score | Top Affiliating Genes | | 1 | integral to plasma membrane | GO:005887 | 11.0 | KIR2DS3, KIR2DS5, KIR3DL2, KIR2DL1, KIR2DL3, CCR5 | | 2 | MHC class II protein complex | GO:042613 | 11.0 | HLA-DMA, HLA-DMB, HLA-DOA, HLA-DOB, HLA-DPA1, HLA-DPB1 | | 3 | external side of plasma membrane | GO:009897 | 10.9 | TLR4, CXCL10, CXCL9, CXCR3, ADA, CTLA4 | | 4 | ER to Golgi transport vesicle membrane | GO:012507 | 10.9 | HLA-DRA, HLA-DRB1, HLA-DRB3, HLA-DRB4, HLA-DRB5, HLA-E | | 5 | integral to lumenal side of endoplasmic reticulum membrane | GO:071556 | 10.9 | HLA-G, HLA-DPB1, HLA-DQA1, HLA-DQA2, HLA-DQB1, HLA-DRA | | 6 | clathrin-coated endocytic vesicle membrane | GO:030669 | 10.7 | HLA-DRB1, HLA-DRB5, HLA-DRB4, HLA-DRB3, HLA-DPA1, HLA-DPB1 | | 7 | trans-Golgi network membrane | GO:032588 | 10.7 | HLA-DPB1, HLA-DRB5, HLA-DRB4, HLA-DQB1, HLA-DQA1, HLA-DQA2 | | 8 | transport vesicle membrane | GO:030658 | 10.6 | HLA-DPB1, HLA-DRB1, HLA-DRB5, HLA-DRB4, HLA-DRB3, HLA-DRA | | 9 | lysosomal membrane | GO:005765 | 10.6 | HLA-DPB1, SLC17A5, HLA-DRB3, HLA-DRB1, HLA-DQB1, HLA-DQA2 | | 10 | MHC class I protein complex | GO:042612 | 10.5 | HLA-G, HLA-A, HLA-B, HLA-C, HLA-E, HLA-F | | 11 | endocytic vesicle membrane | GO:030666 | 10.4 | HLA-DPB1, HLA-DQA2, HLA-DQA1, HLA-DPA1, HLA-DQB1, HLA-DRB1 | | 12 | DNA replication factor C complex | GO:005663 | 9.7 | RFC5, RFC1, RFC3, RFC4, RFC2, PCNA | | 13 | cell surface | GO:009986 | 9.6 | TNFRSF1A, TNF, HMMR, HMGB1, CCR5, APOH | | 14 | plasma membrane | GO:005886 | 9.1 | TNFRSF8, TGFBI, PRTN3, PRF1, CXCR3, PECAM1 | | 15 | platelet alpha granule lumen | GO:031093 | 8.8 | TGFB1, GAS6, TGFB3, VEGFA, F5, ALB | | 16 | nucleoplasm | GO:005654 | 8.7 | TYMS, OGG1, TDG, MUTYH, XRCC1, MPG | | 17 | extracellular space | GO:005615 | 7.4 | VCAM1, BMP6, CD14, CD40LG, MMP9, MICA | | 18 | extracellular region | GO:005576 | 6.5 | TGFB2, GAS6, TGFB3, TGFBI, TF, TFF3 |
Biological processes related to graft versus host disease according to GeneDecks: (show top 50)
(show all 90)
| id | Name | GO ID | Score | Top Affiliating Genes | | 1 | immune response | GO:006955 | 11.7 | IL3, KIR2DL3, KIR2DL1, KIR2DS5, KIR3DL1, KIR2DS1 | | 2 | T cell costimulation | GO:031295 | 11.1 | HLA-DQA1, HLA-DPB1, HLA-DPA1, ICOS, CD80, CD86 | | 3 | antigen processing and presentation of exogenous peptide antigen via MHC class II | GO:019886 | 11.1 | HLA-DRB5, HLA-DMB, HLA-DOB, HLA-DOA, HLA-DPA1, HLA-DRB4 | | 4 | chemotaxis | GO:006935 | 11.1 | HRG, CXCL10, CXCL11, CXCL9, CXCR3, CCL5 | | 5 | cell-cell signaling | GO:007267 | 11.0 | CD86, TNFSF8, SST, LTA, LTB, TGFB2 | | 6 | regulation of immune response | GO:050776 | 11.0 | KIR3DL2, KIR2DL1, KIR2DL3, KIR3DL1, KIR2DS1, KIR2DL2 | | 7 | positive regulation of interleukin-17 production | GO:032740 | 11.0 | TGFB1, NOD2, IL23R, IL23A, IL2, IL18 | | 8 | base-excision repair, AP site formation | GO:006285 | 10.9 | OGG1, TDG, SMUG1, NTHL1, MBD4, MPG | | 9 | negative regulation of interferon-gamma production | GO:032689 | 10.9 | GAS6, FOXP3, TNFSF4, IL10, HLA-DRB1, HLA-DRB3 | | 10 | positive regulation of T cell proliferation | GO:042102 | 10.9 | CD28, PNP, TNFRSF13C, VCAM1, IFNG, CCL5 | | 11 | T-helper 1 type immune response | GO:042088 | 10.8 | IL18BP, HLA-DRB1, HLA-DRB3, HLA-DRB4, HLA-DRB5, IL18 | | 12 | detection of bacterium | GO:016045 | 10.8 | HLA-DRB4, HLA-DRB5, HLA-A, HLA-DRB1, HLA-B, NOD2 | | 13 | positive regulation of tumor necrosis factor production | GO:032760 | 10.8 | CD36, CLEC7A, TLR4, CD14, IL18, NOD2 | | 14 | positive regulation of interferon-gamma production | GO:032729 | 10.7 | TNF, IL23R, IL23A, IL1B, IL18, CD40LG | | 15 | interferon-gamma-mediated signaling pathway | GO:060333 | 10.7 | ICAM1, HLA-DPA1, HLA-DPB1, HLA-DQA1, HLA-DQA2, HLA-DQB1 | | 16 | cellular response to mechanical stimulus | GO:071260 | 10.7 | IL18, IRF1, CD40, IL13, TLR4, IL1B | | 17 | negative regulation of T cell proliferation | GO:042130 | 10.7 | HLA-DRB3, IL10, FOXP3, TGFB1, HLA-G, HLA-DRB1 | | 18 | positive regulation of B cell proliferation | GO:030890 | 10.7 | CD40LG, CD40, IL13, IL2, IL4, IL5 | | 19 | base-excision repair | GO:006284 | 10.6 | FEN1, POLD1, MBD4, POLB, POLD2, MPG | | 20 | positive regulation of interleukin-12 production | GO:032735 | 10.5 | TNFSF4, HLA-G, IDO1, IFNG, IL23R, IL23A | | 21 | response to lipopolysaccharide | GO:032496 | 10.5 | IL1A, TNFRSF1A, IL18BP, IL13, FGF10, MMP9 | | 22 | nucleotide-excision repair, DNA gap filling | GO:006297 | 10.5 | RFC4, POLE, POLB, RFC2, PCNA, RFC3 | | 23 | telomere maintenance via semi-conservative replication | GO:032201 | 10.5 | RFC5, RFC4, RFC2, PCNA, LIG1, FEN1 | | 24 | telomere maintenance via recombination | GO:000722 | 10.5 | RFC5, RFC4, RFC2, RFC1, RFC3, POLD2 | | 25 | positive regulation of inflammatory response | GO:050729 | 10.5 | TLR4, TNFRSF1A, IL23A, IL2, IL18, CCL3 | | 26 | positive regulation of MHC class II biosynthetic process | GO:045348 | 10.4 | TLR4, IL4, CD40LG, CIITA, IL10, IFNG | | 27 | DNA strand elongation involved in DNA replication | GO:006271 | 10.4 | RFC1, RFC2, RFC3, RFC4, FEN1, RFC5 | | 28 | positive regulation of I-kappaB kinase/NF-kappaB cascade | GO:043123 | 10.4 | LGALS9, CD36, CD40, FKBP1A, IL1A, TLR9 | | 29 | positive regulation of interleukin-10 production | GO:032733 | 10.4 | IL23A, TLR4, CD40LG, TNFSF4, NOD2, TLR9 | | 30 | DNA repair | GO:006281 | 10.4 | SMUG1, RFC1, RFC2, RFC3, NTHL1, MBD4 | | 31 | transcription-coupled nucleotide-excision repair | GO:006283 | 10.3 | RFC1, PCNA, RFC2, POLE, POLD1, POLD2 | | 32 | cytokine-mediated signaling pathway | GO:019221 | 10.3 | IL5, IL6, IFNG, IFNGR2, ICAM1, HLA-A | | 33 | positive regulation of ERK1 and ERK2 cascade | GO:070374 | 10.3 | CCL3, IL1B, IL1A, FGF10, GAS6, TNF | | 34 | telomere maintenance | GO:000723 | 10.2 | RFC5, PCNA, RFC4, RFC3, RFC2, RFC1 | | 35 | inflammatory response | GO:006954 | 10.2 | CXCL9, CXCL11, CXCL10, TGFB1, TLR9, CRP | | 36 | nucleotide-excision repair | GO:006289 | 10.2 | LIG1, RFC1, PCNA, RFC5, RFC4, RFC2 | | 37 | positive regulation of interleukin-6 production | GO:032755 | 10.2 | TNFSF4, NOD2, TLR4, TLR9, IL1A, TNF | | 38 | signal transduction | GO:007165 | 10.1 | PECAM1, GAS6, CXCL9, IL10RA, FAS, CCL8 | | 39 | cellular response to lipopolysaccharide | GO:071222 | 10.1 | TLR4, CD36, CD14, GSTP1, IL10, CCR5 | | 40 | aging | GO:007568 | 10.1 | FAS, TIMP3, CCL5, IL15, VCAM1, IL1B | | 41 | response to drug | GO:042493 | 9.9 | SMPD1, PNP, LTA, ABCB1, TOP1, TGFB2 | | 42 | cell surface receptor signaling pathway | GO:007166 | 9.8 | IFNG, CXCL10, CD28, CD36, CD14, CD4 | | 43 | DNA replication | GO:006260 | 9.7 | RFC3, TYMS, EGF, PDGFB, CENPF, PCNA | | 44 | positive regulation of cell proliferation | GO:008284 | 9.7 | VEGFA, IL6, CD86, IL3, IL2, IL15 | | 45 | positive regulation of peptidyl-tyrosine phosphorylation | GO:050731 | 9.6 | CD36, FGF10, CD80, CD4, IL11, VEGFA | | 46 | positive regulation of apoptotic process | GO:043065 | 9.4 | TGFB2, MMP9, IL1B, FASLG, FAS, IDO1 | | 47 | positive regulation of transcription from RNA polymerase II promoter | GO:045944 | 9.3 | HMGB1, IL1A, IL17F, IL17A, IL6, FGF10 | | 48 | response to hypoxia | GO:001666 | 9.1 | LTA, TLR4, TGFB1, TGFB3, PML, ADA | | 49 | platelet degranulation | GO:002576 | 8.7 | TGFB3, GAS6, HGF, PECAM1, TF, F13A1 | | 50 | platelet activation | GO:030168 | 8.1 | THPO, TGFB1, F5, IL6, TGFB2, TGFB3 |
Molecular functions related to graft versus host disease according to GeneDecks: (show all 15)
| id | Name | GO ID | Score | Top Affiliating Genes | | 1 | tumor necrosis factor receptor binding | GO:005164 | 10.9 | TNFSF14, TNFSF8, LTB, LTA, TNFSF13B, TNFSF12 | | 2 | tumor necrosis factor-activated receptor activity | GO:005031 | 10.9 | FAS, TNFRSF4, TNFRSF8, TNFRSF1B, TNFRSF1A, TNFRSF18 | | 3 | MHC class II receptor activity | GO:032395 | 10.8 | HLA-DPA1, HLA-DOA, HLA-DOB, HLA-DQA1, HLA-DQA2, HLA-DQB1 | | 4 | damaged DNA binding | GO:003684 | 10.7 | POLI, POLB, OGG1, TDG, XRCC1, PNKP | | 5 | MHC class I receptor activity | GO:032393 | 10.6 | HLA-A, HLA-B, HLA-E, HLA-F, HLA-G, HLA-C | | 6 | cytokine activity | GO:005125 | 10.6 | IL17F, HMGB1, TNF, TNFSF10, TNFSF12, TNFSF13B | | 7 | receptor activity | GO:004872 | 10.4 | KIR2DL1, FAS, F2RL1, KIR2DL3, CD86, CD4 | | 8 | receptor binding | GO:005102 | 10.4 | ITGB7, MIF, FASLG, CXCL10, TGFB2, LTB | | 9 | chemokine activity | GO:008009 | 10.4 | CXCL11, CCL25, CCL3, CCL5, CXCL10, CXCL9 | | 10 | chemoattractant activity | GO:042056 | 10.3 | FGF10, FGF7, VEGFA, MIF, HMGB1, CCL5 | | 11 | platelet-derived growth factor receptor binding | GO:005161 | 10.0 | IL1R1, VEGFA, PDGFB, PDGFRB, PDGFRA | | 12 | transmembrane signaling receptor activity | GO:004888 | 9.9 | TLR4, KLRD1, TNFRSF8, ICAM1, IL18RAP, CD4 | | 13 | cell surface binding | GO:043498 | 9.9 | PDGFB, VEGFA, MIF, ICAM1, F3, HRG | | 14 | growth factor activity | GO:008083 | 9.0 | HGF, IL10, FGF7, FGF10, BMP6, VEGFA | | 15 | protein binding | GO:005515 | 5.3 | TNFRSF1A, CCR5, MBD4, FAS, FASLG, APOH |
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