Sources: 12Gene Ontology See all sources |
Cellular components related to hypoxia according to GeneDecks: (show all 20)
| id | Name | GO ID | Score | Top Affiliating Genes | | 1 | integral to plasma membrane | GO:005887 | INF | LRP1, RET, SELL, SELP, SEMA4D, BMPR2 | | 2 | cytosol | GO:005829 | 61.5 | PIK3CB, PIK3CD, PIK3CA, PIK3R1, PIK3C2A, PIK3CG | | 3 | extracellular region | GO:005576 | 39.4 | RETNLB, KITLG, VWCE, VWF, VTN, SFTPA1 | | 4 | nucleoplasm | GO:005654 | 35.3 | ZNF217, NCOA1, NCOA2, RELA, PCNA, RB1 | | 5 | mitochondrion | GO:005739 | 30.4 | PC, PCK2, BSG, VHL, VDAC2, BOK | | 6 | perinuclear region of cytoplasm | GO:048471 | 20.9 | KLHL20, PDE4A, SELE, SEPT9, VLDLR, LMNA | | 7 | transcription factor complex | GO:005667 | 17.1 | RELA, GCM1, MYOD1, USF1, CLOCK, PARP1 | | 8 | neuronal cell body | GO:043025 | 17.0 | NCOA2, BMPR2, SDC2, CHRM2, CHAT, CHRNA4 | | 9 | protein complex | GO:043234 | 16.1 | BRCA1, MYC, BMP2, USP28, BECN1, PAK1 | | 10 | membrane raft | GO:045121 | 14.9 | SELE, BSG, LCK, P2RX3, FURIN, CD24 | | 11 | external side of plasma membrane | GO:009897 | 14.9 | KIT, VWF, SELL, SELP, VCAM1, KDR | | 12 | mitochondrial outer membrane | GO:005741 | 14.8 | VDAC2, BNIP3, BNIP3L, BMF, RAF1, BID | | 13 | platelet alpha granule lumen | GO:031093 | 13.8 | VWF, SERPINA1, SERPINE1, VEGFA, VEGFB, VEGFC | | 14 | caveola | GO:005901 | 12.8 | SELE, BMPR2, KCNA5, KCNMA1, ATP1B1, MLC1 | | 15 | cytoplasm | GO:005737 | INF | PIAS4, PIP5KL1, PIK3C2A, PIK3CG, PIM1, WDR26 | | 16 | membrane | GO:016020 | INF | PIP5KL1, PIK3CG, PDE4A, RECK, REN, SELENBP1 | | 17 | cell surface | GO:009986 | INF | KLHL20, SFRP1, VLDLR, VEGFA, VCAM1, BMP2 | | 18 | nucleus | GO:005634 | INF | ZNF354A, ZNF195, PIK3CB, PIAS4, PIK3C2A, PIM1 | | 19 | extracellular space | GO:005615 | INF | REN, KIT, KITLG, VTN, SFRP1, SFTPA1 | | 20 | plasma membrane | GO:005886 | INF | PIK3CD, PIK3R1, PIK3C2A, PIK3CG, PIM1, |
Biological processes related to hypoxia according to GeneDecks: (show top 50)
(show all 91)
| id | Name | GO ID | Score | Top Affiliating Genes | | 1 | small molecule metabolic process | GO:044281 | 40.2 | PIK3CB, PIK3CD, PIK3CA, PIK3R1, PIK3C2A, PIK3CG | | 2 | response to hypoxia | GO:001666 | 31.8 | SFTPB, SERPINA1, NARFL, VEGFA, VCAM1, BNIP3 | | 3 | response to drug | GO:042493 | 26.6 | PDE4A, REN, SFRP1, NBN, VLDLR, VEGFC | | 4 | gene expression | GO:010467 | 22.1 | WARS, SERPINE1, MYC, RARA, ZFP36, ZFP36L1 | | 5 | negative regulation of transcription, DNA-dependent | GO:045892 | 21.0 | ZNF217, PIAS4, PDCD4, RELA, SFRP1, BTRC | | 6 | cellular response to hypoxia | GO:071456 | 20.0 | RGCC, SFRP1, RBX1, VLDLR, VHL, VEGFA | | 7 | innate immune response | GO:045087 | 19.4 | PIK3CD, PIK3CG, RELA, CLU, BCL2, BCL2L1 | | 8 | axon guidance | GO:007411 | 19.0 | SEMA4D, SEMA3F, SEMA4A, VASP, RAF1, RAC1 | | 9 | positive regulation of angiogenesis | GO:045766 | 17.3 | SERPINE1, VEGFA, RAMP2, UTS2, UTS2R, KDR | | 10 | glucose metabolic process | GO:006006 | 17.2 | PIK3CA, PC, PCK2, MYC, USF1, KCNJ11 | | 11 | heart development | GO:007507 | 17.2 | PCNA, VLDLR, VCAM1, BMP2, RAMP2, RAF1 | | 12 | insulin receptor signaling pathway | GO:008286 | 17.0 | PIK3CB, PIK3CA, PIK3R1, PIK3C2A, NAMPT, RAF1 | | 13 | epidermal growth factor receptor signaling pathway | GO:007173 | 16.9 | PIK3CA, PIK3R1, PIK3C2A, KIF16B, RAF1, CHUK | | 14 | transforming growth factor beta receptor signaling pathway | GO:007179 | 16.8 | SERPINE1, MYC, PARP1, CITED2, UBA52, UBB | | 15 | aging | GO:007568 | 16.8 | SERPINF1, VCAM1, SCAP, UCP3, BAK1, FURIN | | 16 | response to lipopolysaccharide | GO:032496 | 16.8 | SFTPB, SFTPC, SELE, SELP, SERPINA1, KCNJ8 | | 17 | cell cycle arrest | GO:007050 | 16.7 | RB1, NBN, SESN2, MYC, SART1, MSH2 | | 18 | fibroblast growth factor receptor signaling pathway | GO:008543 | 16.6 | PIK3CA, PIK3R1, KIF16B, BRAF, RAF1, CHUK | | 19 | response to estradiol stimulus | GO:032355 | 16.5 | NCOA1, SERPINA1, BMP4, RARA, BID, PAM | | 20 | transcription initiation from RNA polymerase II promoter | GO:006367 | 16.4 | SERPINE1, MYC, RARA, PARP1, UBA52, UBB | | 21 | positive regulation of protein phosphorylation | GO:001934 | 15.9 | SEMA4D, VEGFA, BMP2, BMP4, MT3, MTOR | | 22 | Notch signaling pathway | GO:007219 | 15.9 | RBX1, SEL1L, MYC, BMP2, UBA52, UBB | | 23 | protein autophosphorylation | GO:046777 | 15.8 | PIM1, KIT, VRK2, PAK1, KDR, CHEK2 | | 24 | induction of apoptosis by intracellular signals | GO:008629 | 15.8 | BNIP3, MYC, BMF, BID, CLU, BCL2 | | 25 | response to ethanol | GO:045471 | 15.8 | BGLAP, BCL2, CHAT, CHRNB2, LCT, BAK1 | | 26 | positive regulation of gene expression | GO:010628 | 15.7 | KIT, BRAF, VEGFA, BMP2, RAMP2, CITED2 | | 27 | negative regulation of neuron apoptotic process | GO:043524 | 15.7 | BRAF, VEGFB, PARK7, PARK2, BDNF, BCL2 | | 28 | regulation of cell proliferation | GO:042127 | 15.6 | KIT, SERPINE1, BRCA1, BMPR2, BID, BIRC6 | | 29 | positive regulation of endothelial cell proliferation | GO:001938 | 15.6 | VEGFA, VEGFB, BMP2, BMP4, BMP6, BMPR2 | | 30 | response to glucose stimulus | GO:009749 | 15.5 | SFTPB, SFTPC, UCN3, IRS2, ARG2, INSR | | 31 | platelet degranulation | GO:002576 | 14.7 | VWF, SELP, SERPINA1, SERPINE1, VEGFA, VEGFB | | 32 | toll-like receptor 3 signaling pathway | GO:034138 | 14.6 | RELA, CHUK, UBA52, UBB, UBC, ATF2 | | 33 | positive regulation of ERK1 and ERK2 cascade | GO:070374 | 14.6 | BRAF, VEGFB, BMP2, BMP4, KDR, MT3 | | 34 | toll-like receptor signaling pathway | GO:002224 | 14.6 | RELA, CHUK, UBA52, UBB, UBC, ATF2 | | 35 | toll-like receptor 2 signaling pathway | GO:034134 | 14.6 | RELA, CHUK, UBA52, UBB, UBC, ATF2 | | 36 | cellular response to stress | GO:033554 | 14.5 | RBX1, VHL, VEGFA, PAK1, UBA52, UBB | | 37 | toll-like receptor 4 signaling pathway | GO:034142 | 14.5 | RELA, CHUK, UBA52, UBB, UBC, ATF2 | | 38 | MyD88-dependent toll-like receptor signaling pathway | GO:002755 | 14.5 | RELA, CHUK, UBA52, UBB, UBC, ATF2 | | 39 | cellular response to mechanical stimulus | GO:071260 | 14.5 | SFTPB, SFTPC, BNIP3, CHEK1, BAD, BAK1 | | 40 | TRIF-dependent toll-like receptor signaling pathway | GO:035666 | 14.4 | RELA, CHUK, UBA52, UBB, UBC, ATF2 | | 41 | MyD88-independent toll-like receptor signaling pathway | GO:002756 | 14.4 | RELA, CHUK, UBA52, UBB, UBC, ATF2 | | 42 | activation of pro-apoptotic gene products | GO:008633 | 14.4 | MYC, BMF, BID, BCL2, BCL2L11, BBC3 | | 43 | toll-like receptor 1 signaling pathway | GO:034130 | 14.4 | RELA, CHUK, UBA52, UBB, UBC, ATF2 | | 44 | positive regulation of protein kinase B signaling cascade | GO:051897 | 14.3 | PIK3CG, VEGFB, MTDH, MTOR, MST1R, INS | | 45 | response to wounding | GO:009611 | 14.0 | VWF, RAC1, ITGB4, FN1, FGF7, MET | | 46 | regulation of transcription from RNA polymerase II promoter in response to hypoxia | GO:061418 | 13.9 | RBX1, VHL, VEGFA, UBA52, UBB, UBE2D3 | | 47 | cell-cell signaling | GO:007267 | INF | NAMPT, BMP2, CGA, ITGB2, AR, INHBA | | 48 | positive regulation of transcription from RNA polymerase II promoter | GO:045944 | INF | , KLF2, NCOA1, NCOA2, RELA, RB1 | | 49 | positive regulation of transcription, DNA-dependent | GO:045893 | INF | , KLF1, KLF2, KLF5, NCOA1, RELA | | 50 | signal transduction | GO:007165 | INF | PIK3CB, PIK3CD, PDE4A, RET, KIT, KITLG |
Molecular functions related to hypoxia according to GeneDecks: (show all 18)
| id | Name | GO ID | Score | Top Affiliating Genes | | 1 | protein homodimerization activity | GO:042803 | INF | KIT, VWF, SFTPC, VEGFA, VEGFB, BNIP3 | | 2 | ATP binding | GO:005524 | 36.2 | PIK3CB, PIK3CD, PIK3CA, PIP5KL1, PIK3C2A, PIK3CG | | 3 | sequence-specific DNA binding transcription factor activity | GO:003700 | 29.0 | ZNF217, KLF1, KLF16, KLF2, KLF5, RELA | | 4 | sequence-specific DNA binding | GO:043565 | 22.0 | KLF2, NANOG, MYC, RARA, USF2, USF1 | | 5 | identical protein binding | GO:042802 | 20.6 | RELA, SFRP1, PCNA, BNIP3, BNIP3L, RAD51 | | 6 | transcription factor binding | GO:008134 | 20.5 | PIM1, RELA, GCM1, RB1, NBN, VHL | | 7 | receptor binding | GO:005102 | 19.9 | REN, SEMA4D, SERPINE1, BMP2, RARA, UTS2 | | 8 | protein kinase binding | GO:019901 | 19.5 | RGCC, RELA, USF1, ZFP36, PAK1, PARK2 | | 9 | enzyme binding | GO:019899 | 18.3 | NCOA1, BRCA1, VHL, RARA, RAC1, USF1 | | 10 | protein kinase activity | GO:004672 | 16.6 | PIK3CG, BRAF, RAF1, PAK1, CHUK, AURKA | | 11 | iron ion binding | GO:005506 | 16.2 | KDM3A, SDHD, SCD, P4HA1, P4HA2, P4HA3 | | 12 | heparin binding | GO:008201 | 15.3 | VTN, SFRP1, SELL, SELP, VEGFA, VEGFB | | 13 | hormone activity | GO:005179 | 14.7 | RETNLB, VIP, UTS2, LEP, UCN2, UCN3 | | 14 | protein binding | GO:005515 | INF | ZNF217, PIK3CB, PIK3CD, PIK3CA, PIK3R1, PIAS4 | | 15 | ubiquitin protein ligase binding | GO:031625 | INF | PIAS4, RELA, RB1, RBX1, BRCA1, MYOD1 | | 16 | cytokine activity | GO:005125 | INF | KITLG, NAMPT, VEGFA, BMP2, BMP4, BMP6 | | 17 | growth factor activity | GO:008083 | INF | KITLG, VEGFA, VEGFB, VEGFC, BMP2, BMP4 | | 18 | protein heterodimerization activity | GO:046982 | INF | BRAF, VEGFA, VEGFB, BOK, BNIP3, BNIP3L |
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