Sources: 12Gene Ontology See all sources |
Cellular components related to keloids according to GeneDecks: (show all 14)
| id | Name | GO ID | Score | Top Affiliating Genes | | 1 | extracellular matrix | GO:031012 | 10.5 | TGFB3, TGFB2, TGFB1I1, TIMP3, COL14A1, COMP | | 2 | proteinaceous extracellular matrix | GO:005578 | 10.1 | DPT, POSTN, TGFBR3, TGFB1, MMP1, MMP13 | | 3 | platelet alpha granule lumen | GO:031093 | 10.0 | PDGFA, F13A1, TGFB2, TGFB3, TGFB1, TIMP1 | | 4 | cell surface | GO:009986 | 9.7 | RSPO2, TGFB1, TGFB2, TGFBR3, TGFB3, CXCR2 | | 5 | integral to lumenal side of endoplasmic reticulum membrane | GO:071556 | 9.4 | HLA-B, HLA-C, HLA-DQA1, HLA-DQB1, HLA-A, HLA-DRB1 | | 6 | ER to Golgi transport vesicle membrane | GO:012507 | 9.2 | HLA-DRB1, HLA-DQA1, HLA-C, HLA-B, HLA-A, HLA-DQB1 | | 7 | external side of plasma membrane | GO:009897 | 9.1 | TGFBR3, TGFBR2, HLA-DRB1, FAS, IFNG, IL17A | | 8 | membrane | GO:016020 | 8.3 | PIK3CG, NR3C1, PDGFRB, CXCR2, GAPDH, SPHK2 | | 9 | nucleoplasm | GO:005654 | 8.1 | JUN, CASP3, CCND1, MAPK1, CASP6, HIF1A | | 10 | cytosol | GO:005829 | 8.0 | TRADD, FGFR1, PIK3CB, PIK3CG, AKT1, CASP9 | | 11 | extracellular space | GO:005615 | 6.9 | IL24, IL6, IL6R, FBLN5, FBN1, FAP | | 12 | extracellular region | GO:005576 | 6.9 | VEGFA, FAS, CCL2, IGF1, IFNA2, IFNB1 | | 13 | cytoplasm | GO:005737 | 6.6 | CBR3, HSPB6, CASP3, CASP6, CASP14, AKT1 | | 14 | nucleus | GO:005634 | 6.3 | DYNLL1, SPHK1, NR3C1, SMAD2, SMAD3, SMAD6 |
Biological processes related to keloids according to GeneDecks: (show top 50)
(show all 103)
| id | Name | GO ID | Score | Top Affiliating Genes | | 1 | positive regulation of epithelial to mesenchymal transition | GO:010718 | 10.9 | TGFB2, TGFB3, TGFB1I1, TGFB1, COL1A1, SMAD3 | | 2 | collagen fibril organization | GO:030199 | 10.8 | COL1A1, COL14A1, TGFB2, TGFBR1, DPT, LOX | | 3 | pathway-restricted SMAD protein phosphorylation | GO:060389 | 10.8 | TGFBR2, TGFBR1, TGFB2, TGFB1, TGFBR3, SMAD7 | | 4 | response to laminar fluid shear stress | GO:034616 | 10.8 | TGFB1, SMAD7, TGFB3, TGFB2, SMAD6 | | 5 | wound healing | GO:042060 | 10.7 | SMAD3, DCN, TGFB2, RAF1, FGF2, LOX | | 6 | negative regulation of transforming growth factor beta receptor signaling pathway | GO:030512 | 10.7 | SMAD7, NR3C1, ASPN, SMAD2, SMAD3, SMAD6 | | 7 | cellular response to zinc ion | GO:071294 | 10.7 | MT1A, MT1G, MT1X, MT2A, MT1F | | 8 | collagen catabolic process | GO:030574 | 10.6 | MMP9, MMP1, PEPD, MMP8, MMP2, MMP13 | | 9 | induction of apoptosis | GO:006917 | 10.6 | CASP3, TRADD, FAS, CASP6, IFNA2, MAPK1 | | 10 | aging | GO:007568 | 10.6 | CCL2, PTGS1, JUN, TIMP1, TIMP3, FAS | | 11 | extracellular matrix disassembly | GO:022617 | 10.6 | TIMP1, MMP1, MMP13, MMP2, MMP8, MMP9 | | 12 | negative regulation of growth | GO:045926 | 10.5 | MT1A, MT1G, MT1F, MT1X, MT2A, HIF1A | | 13 | positive regulation of cell division | GO:051781 | 10.5 | TGFB3, PDGFA, FGF2, FGF1, VEGFA, TGFB1 | | 14 | extracellular matrix organization | GO:030198 | 10.5 | COL1A1, MMP9, MMP8, TIMP2, TIMP1, ELN | | 15 | transforming growth factor beta receptor signaling pathway | GO:007179 | 10.4 | TGFBR1, TGFB3, TGFB2, TGFB1, SMAD7, SMAD6 | | 16 | response to wounding | GO:009611 | 10.4 | PDGFA, CTGF, TGFB1, TGFB2, PAX6, CASP3 | | 17 | platelet degranulation | GO:002576 | 10.2 | IGF1, VEGFA, F13A1, TMSB4X, PDGFA, TIMP1 | | 18 | positive regulation of cell migration | GO:030335 | 10.1 | PDGFRA, PDGFRB, COL1A1, TGFB1, SMAD3, SPHK1 | | 19 | positive regulation of angiogenesis | GO:045766 | 10.0 | TNFSF12, HIF1A, SPHK1, VEGFA, SERPINE1, KDR | | 20 | angiogenesis | GO:001525 | 10.0 | CCL2, MMP19, MAPK14, FGFR1, MMP2, TNFSF12 | | 21 | positive regulation of endothelial cell proliferation | GO:001938 | 10.0 | KDR, HIF1A, TNFSF12, CCL2, FGF2, JUN | | 22 | vascular endothelial growth factor receptor signaling pathway | GO:048010 | 10.0 | MAPK14, VEGFA, KDR, CCL2, PDGFRA, PDGFRB | | 23 | cellular response to mechanical stimulus | GO:071260 | 9.9 | TLR8, COL1A1, MAPK8, FAS, IL13, ITGB1 | | 24 | positive regulation of ERK1 and ERK2 cascade | GO:070374 | 9.9 | KDR, CD44, MIF, FGF2, CTGF, PDGFA | | 25 | response to hypoxia | GO:001666 | 9.9 | VEGFA, MMP9, RAF1, SMAD3, HIF1A, TGFB1 | | 26 | positive regulation of mesenchymal cell proliferation | GO:002053 | 9.8 | TGFBR2, PDGFA, TP63, IFNG, FGFR1, KDR | | 27 | positive regulation of phosphatidylinositol 3-kinase cascade | GO:014068 | 9.7 | NEDD4, TGFB2, PDGFRB, PDGFRA, PDGFA, IGF1 | | 28 | positive regulation of peptidyl-serine phosphorylation | GO:033138 | 9.7 | VEGFA, RAF1, CD44, MIF, IL6, AKT1 | | 29 | skeletal system development | GO:001501 | 9.7 | MMP9, FBN1, IGF1, TP63, BMP6, FGFR1 | | 30 | response to cytokine stimulus | GO:034097 | 9.6 | JUN, IL6R, CASP6, PTGS2, TIMP1, SERPINE1 | | 31 | platelet activation | GO:030168 | 9.4 | TGFB3, SERPINE1, PIK3CG, PIK3CB, VEGFA, RAF1 | | 32 | virus-host interaction | GO:019048 | 9.4 | KDR, ITGB1, MMP1, MAPK1, HLA-B, HLA-C | | 33 | apoptotic process | GO:006915 | 9.4 | FAM215A, FAS, IL24, MAPK8, MAPK1, IFNG | | 34 | phosphatidylinositol-mediated signaling | GO:048015 | 9.4 | PDGFRA, AKT1, CASP9, IGF1, PIK3CB, IGF1R | | 35 | positive regulation of MAPK cascade | GO:043410 | 9.3 | IGF1, PDGFA, KDR, CD36, ITGB1, FGFR1 | | 36 | immune response | GO:006955 | 9.2 | TGFBR3, TNFSF12, TLR6, BMP6, IL13, SMAD3 | | 37 | interferon-gamma-mediated signaling pathway | GO:060333 | 9.1 | MT2A, JAK1, HLA-DQB1, HLA-DQA1, HLA-C, HLA-B | | 38 | negative regulation of apoptotic process | GO:043066 | 9.0 | PIK3CG, CASP3, VEGFA, RAF1, IGF1R, KDR | | 39 | blood coagulation | GO:007596 | 9.0 | DGKQ, TGFB3, TGFB2, TGFB1, TIMP1, PDGFA | | 40 | positive regulation of peptidyl-tyrosine phosphorylation | GO:050731 | 9.0 | MIF, TP53, IGF1, IL6R, IL6, VEGFA | | 41 | positive regulation of cell proliferation | GO:008284 | 9.0 | TGFB1, TGFB2, FGF2, PDGFRB, IGF1R, TIMP1 | | 42 | negative regulation of cell proliferation | GO:008285 | 8.7 | FGF2, DPT, TGFB3, TGFB2, TGFB1I1, RAF1 | | 43 | positive regulation of transcription, DNA-dependent | GO:045893 | 8.5 | SMAD3, COL1A1, HIF1A, TGFB1, TGFB1I1, TGFB3 | | 44 | anti-apoptosis | GO:006916 | 8.5 | COMP, IGF1, AKT1, SPHK2, SPHK1, NR3C1 | | 45 | positive regulation of smooth muscle cell proliferation | GO:048661 | 8.4 | JUN, IGF1, IL13, IL6, IL6R, PTGS2 | | 46 | cytokine-mediated signaling pathway | GO:019221 | 8.1 | CCL2, IFNA2, IL6R, IFNB1, IL6, CD44 | | 47 | positive regulation of transcription from RNA polymerase II promoter | GO:045944 | 8.1 | TP63, TP53, AKT1, IFNG, SP1, SMAD2 | | 48 | signal transduction | GO:007165 | 8.1 | IGF1, TLR6, TGFBR1, CXCR2, POMC, STAT3 | | 49 | inflammatory response | GO:006954 | 8.0 | IFNA2, IL6, IL17A, MIF, IL10, IL13 | | 50 | response to drug | GO:042493 | 8.0 | IFNG, LOX, CCND1, CCL2, STAT3, TGFBR2 |
Molecular functions related to keloids according to GeneDecks: (show all 24)
| id | Name | GO ID | Score | Top Affiliating Genes | | 1 | type II transforming growth factor beta receptor binding | GO:005114 | 10.9 | TGFB2, TGFB3, TGFBR3, TGFBR1, TGFB1 | | 2 | I-SMAD binding | GO:070411 | 10.8 | SMAD2, TGFBR1, SMAD6, TGFB1I1, SMAD7 | | 3 | type I transforming growth factor beta receptor binding | GO:034713 | 10.8 | SMAD2, SMAD6, SMAD7, TGFBR2, TGFB3 | | 4 | transforming growth factor beta binding | GO:050431 | 10.8 | TGFB3, CD36, TGFBR1, TGFBR2, TGFBR3 | | 5 | transforming growth factor beta receptor binding | GO:005160 | 10.7 | SMAD2, SMAD3, TGFBR3, TGFB2 | | 6 | glycosaminoglycan binding | GO:005539 | 10.6 | HABP2, VCAN, TGFBR2, TGFBR3, DCN | | 7 | co-SMAD binding | GO:070410 | 10.5 | PAX6, SMAD6, SMAD3, SMAD2 | | 8 | R-SMAD binding | GO:070412 | 10.5 | SMAD3, PAX6, SMAD2, SMAD6, JUN, FOS | | 9 | collagen binding | GO:005518 | 10.4 | DCN, PDGFA, COL14A1, COMP, SMAD7, DDR1 | | 10 | metalloendopeptidase activity | GO:004222 | 10.3 | MMP8, MMP1, MMP9, FAP, ADAM12, MMP2 | | 11 | fibronectin binding | GO:001968 | 10.3 | CTGF, MMP9, ITGB1, VEGFA, SFRP2 | | 12 | heparin binding | GO:008201 | 10.2 | COMP, POSTN, TGFBR3, VEGFA, FGF1, FGFR1 | | 13 | platelet-derived growth factor binding | GO:048407 | 10.1 | PDGFRA, PDGFRB, PDGFA, COL1A1 | | 14 | ubiquitin protein ligase binding | GO:031625 | 10.0 | SMAD2, SMAD6, PAX6, TP53, TNFRSF1B, SMAD3 | | 15 | platelet-derived growth factor receptor binding | GO:005161 | 10.0 | PDGFA, VEGFA, PDGFRB, PDGFRA | | 16 | vascular endothelial growth factor binding | GO:038085 | 10.0 | KDR, PDGFRA, PDGFRB | | 17 | transcription regulatory region DNA binding | GO:044212 | 9.9 | JUN, STAT3, HIF1A, SMAD7, SMAD6, SMAD3 | | 18 | integrin binding | GO:005178 | 9.9 | SFRP2, KDR, ITGB1, FBLN5, IGF1, CTGF | | 19 | protein heterodimerization activity | GO:046982 | 9.8 | PDGFA, TGFB1, TLR6, VEGFA, RAF1, ITGB1 | | 20 | identical protein binding | GO:042802 | 9.6 | TP63, TP53, TGFB3, NFKBIA, COL1A1, TRADD | | 21 | growth factor activity | GO:008083 | 9.2 | BMP6, TGFB3, TGFB2, TGFB1, PDGFA, CTGF | | 22 | cytokine activity | GO:005125 | 8.9 | FGF2, VEGFA, TGFB2, TNFSF12, BMP6, IFNB1 | | 23 | protein homodimerization activity | GO:042803 | 8.8 | NR3C1, PDGFA, PDGFRA, TGFB1, SMAD3, TGFB2 | | 24 | protein binding | GO:005515 | 4.2 | PCNA, MMP2, MMP9, PLAU, FOXL2, MIF |
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