MCID: LYM027
MIFTS: 58

Lymphopenia malady

Immune diseases category

Summaries for Lymphopenia

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8Disease Ontology, 63Wikipedia, 32MalaCards
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Wikipedia:63 Lymphocytopenia, or lymphopenia, is the condition of having an abnormally low level of lymphocytes in... more...

MalaCards: Lymphopenia, also known as lymphocytopenia, is related to systemic lupus erythematosus and influenza. An important gene associated with Lymphopenia is RAG1 (recombination activating gene 1), and among its related pathways are Interleukin-7 signaling and Signaling by Interleukins. The compounds pge2 and ctla4-ig have been mentioned in the context of this disorder. Affiliated tissues include t cells, b cells and breast, and related mouse phenotypes are respiratory system and reproductive system.

Disease Ontology:8 A leukopenia that is the condition of having an abnormally low level of lymphocytes in the blood.

Aliases & Classifications for Lymphopenia

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8Disease Ontology, 10DISEASES, 44Novoseek, 60UMLS, 27ICD9CM, 34MeSH, 39NCIt, 56SNOMED-CT
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Classifications:

Malacards categories (disease lists): (See all malacards categories)
Anatomical: Immune diseases


Aliases & Descriptions:

lymphopenia 8 10 44 60
lymphocytopenia 8


External Ids:

Disease Ontology8 DOID:614
ICD9CM27 288.51
SNOMED-CT56 48813009
MeSH34 D008231
NCIt39 C26823

Related Diseases for Lymphopenia

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Sources:
17GeneCards, 18GeneDecks
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Diseases related to Lymphopenia via text searches within MalaCards or GeneCards/GeneDecks gene sharing:

(show top 50)    (show all 256)
idRelated DiseaseScoreTop Affiliating Genes
1systemic lupus erythematosus30.7LCK, FASLG, LBR, CIITA, CD59, CD28
2influenza30.4LBR, CIITA, CD28, IL7R, IL7, IL2RB
3rheumatoid arthritis30.3PTPN22, CIITA
4arthritis30.3CD59, IL15, IL2RB, PTPN22, CIITA, JAK3
5pneumonia30.3SELL, IL2RB
6severe combined immunodeficiency30.3JAK3, CIITA, ZAP70, IL15, IL7R, IL7
7sarcoidosis30.3LBR, CD28, IL15, IL2RB, ADA
8thrombocytopenia30.2IL7
9tuberculosis30.2LBR, CIITA, IL7, PNP, SELL, ADA
10breast cancer30.1LCK, JAK3, CIITA, CD59, IL15, IL7R
11multiple sclerosis30.1IL7R, IL7, IL2RB, PTPN22, IL15, CD28
12melanoma30.1ZAP70, CIITA, LBR, FASLG, FOXP3, LCK
13mycosis fungoides30.1ADA, IL2RB, IL7, IL15
14sarcoma30.0ADA
15thyroiditis30.0PTPN22, CIITA, FASLG
16thymoma30.0LCK, LBR, IL7
17inflammatory bowel disease30.0LCK, FOXP3, CIITA, CD59, CD28, IL15
18non-hodgkin lymphoma30.0LBR, CD59, CD28, IL15, IL7, IL2RB
19measles29.9LBR, CIITA
20diabetes mellitus29.9SELL, PTPN22, FOXP3
21autoimmune thyroiditis29.9FASLG, CIITA, CD59, PNP, PTPN22
22hodgkin's lymphoma29.9LCK, ZAP70, CD28, IL7, IL2RB, RAG1
23adenocarcinoma29.9ADA, SELL, PNP, CD59, FASLG
24meningitis29.9ADA
25leukemia29.9CD59, ZAP70, JAK3, LBR, FASLG, FOXP3
26connective tissue disease29.7FOXP3, PTPN22
27hepatitis c29.7LCK, CIITA, CD28, IL15, IL7R, IL7
28cutaneous t cell lymphoma29.7IL15, IL7R, IL7, IL2RB, PNP, SELL
29adenosine deaminase deficiency29.7PNP, ADA
30asthma29.7LCK, FOXP3, LBR, JAK3, CIITA, ZAP70
31lung cancer29.7JAK3
32dermatitis29.7FOXP3
33omenn syndrome29.7ADA, RAG1
34malaria29.7PNP, IL2RB
35peritonitis29.7ADA, IL15
36wegener's granulomatosis29.7CD28, CIITA
37hepatitis29.7LCK, FASLG, IL2RB, SELL
38atherosclerosis29.7CIITA, CD59, IL7, SELL
39pulmonary sarcoidosis29.7SELL, IL2RB, LBR
40ischemia29.7IL2RB, CD59, CIITA, LCK
41colorectal cancer29.7LCK, FASLG, LBR, CD59, IL15
42alopecia areata29.7CIITA
43ulcerative colitis29.7CD59, CD28, IL15, IL7, SELL
44psoriasis29.7CIITA, CD59, CD28, IL15, IL7, PNP
45myeloma29.7FASLG, CIITA, CD28, IL15, IL7R, IL7
46graft versus host disease29.7FASLG, JAK3, CD28, IL15, IL7, IL2RB
47purine nucleoside phosphorylase deficiency29.7ADA
48t-cell leukemia29.7LCK, FOXP3, FASLG, LBR, ZAP70, CD28
49encephalitis29.7CIITA
50lupus erythematosus10.5

Graphical network of the top 20 diseases related to Lymphopenia:



Diseases related to lymphopenia

Clinical Features for Lymphopenia

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Drugs & Therapeutics for Lymphopenia

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Sources:
5CenterWatch, 41NIH Clinical Center, 6ClinicalTrials, 60UMLS, 40NDF-RT
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Approved drugs:

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Drug clinical trials:

Search ClinicalTrials for Lymphopenia

Search NIH Clinical Center for Lymphopenia

Search CenterWatch for Lymphopenia

Genetic Tests for Lymphopenia

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Anatomical Context for Lymphopenia

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32MalaCards
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MalaCards organs/tissues related to Lymphopenia:

32
T cells, B cells, Breast, Thymus, Bone, Bone marrow, Thyroid, Testes, Lymph node, Brain, Liver, Heart, Nk cells, Pancreas, Retina, Endothelial, Skin, Spleen, Kidney, Whole blood, Lung, Appendix

Animal Models for Lymphopenia or affiliated genes

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36MGI
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Publications for Lymphopenia

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50PubMed
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Articles related to Lymphopenia:

(show top 50)    (show all 480)
idTitleAuthorsYear
1
Lymphopenia as risk factor for development of severe infections in patients with systemic lupus erythematosus: a case-control study. (23458779)
2013
2
A two-hit model of autoimmunity: lymphopenia and unresponsiveness to TGF-I^ signaling. (22885528)
2012
3
Immunosuppressive effects of streptozotocin-induced diabetes result in absolute lymphopenia and a relative increase of T regulatory cells. (21752956)
2011
4
Pre-treatment lymphopenia as a prognostic biomarker in colorectal cancer patients receiving chemotherapy. (21448592)
2011
5
Letter to the editor. Loss of plasmacytoid dendritic cell function coincides with lymphopenia and viremia during foot-and-mouth disease virus infection. (20565298)
2010
6
Loss of plasmacytoid dendritic cell function coincides with lymphopenia and viremia during foot-and-mouth disease virus infection. (20121400)
2010
7
Treatment of systemic lupus erythematosus in two patients with extreme B-cell lymphopenia: importance of immunomonitoring and avoidance of B-cell targeted therapy. (20128658)
2010
8
CTLA-4 is required by CD4+CD25+ Treg to control CD4+ T-cell lymphopenia-induced proliferation. (19462377)
2009
9
Lymphopenia is observed regularly in the acute (leptospiraemic) phase but not the immune phase of leptospirosis. (19386339)
2009
10
MEKK3 is essential for lymphopenia-induced T cell proliferation and survival. (19265138)
2009
11
Increased susceptibility for superinfection with Streptococcus pneumoniae during influenza virus infection is not caused by TLR7-mediated lymphopenia. (19290047)
2009
12
Relative CD4 lymphopenia and a skewed memory phenotype are the main immunologic abnormalities in a child with Omenn syndrome due to homozygous RAG1-C2633T hypomorphic mutation. (19246248)
2009
13
Statewide newborn screening for severe T-cell lymphopenia. (19996402)
2009
14
Morbidity and mortality in rheumatoid arthritis patients with prolonged therapy-induced lymphopenia: twelve-year outcomes. (18240243)
2008
15
CD4 T cells, lymphopenia, and IL-7 in a multistep pathway to autoimmunity. (18287017)
2008
16
Risk factors for severe respiratory syncytial virus disease in children with cancer: the importance of lymphopenia and young age. (18245413)
2008
17
Lymphopenia is associated with neuropsychiatric manifestations and disease activity in paediatric systemic lupus erythematosus patients. (17673480)
2007
18
Mice deficient in the ALS2 gene exhibit lymphopenia and abnormal hematopietic function. (17156857)
2007
19
Autoimmunity during lymphopenia: a two-hit model. (16766227)
2006
20
Role of vascular cell adhesion molecules and leukocyte apoptosis in the lymphopenia and thrombocytopenia of patients with severe acute respiratory syndrome (SARS). (16182592)
2006
21
Lymphopenia-induced homeostatic proliferation of CD8+ T cells is a mechanism for effective allogeneic skin graft rejection following burn injury. (16709831)
2006
22
A major role for memory CD4 T cells in the control of lymphopenia-induced proliferation of naive CD4 T cells. (15843528)
2005
23
A role for CD28 in lymphopenia-induced proliferation of CD4 T cells. (15356139)
2004
24
Lymphopenia in SARS. (12801759)
2003
25
B-cell lymphopenia and hypogammaglobulinemia in thymoma patients. (12715206)
2003
26
Transient lymphopenia in acutely unwell young infants. (11861241)
2002
27
Adult T cell leukemia/lymphoma with lymphopenia in a Korean. (10803704)
2000
28
Mapping of Zyx coding for zyxin in the rat and its exclusion as a candidate gene for lymphopenia. (10828616)
2000
29
Mapping of caspase-2 in the rat and its exclusion as a candidate gene for lymphopenia. (10051319)
1999
30
T lymphopenia in obese diabetic (db/db) mice is non-selective and thymus independent. (9570339)
1998
31
Thymoma associated with CD4+ lymphopenia, cytomegalovirus infection, and Kaposi's sarcoma. (9343330)
1997
32
CD4 lymphopenia in very elderly people. (8569385)
1996
33
Genetics of the BB rat: association of autoimmune disorders (diabetes, insulitis, and thyroiditis) with lymphopenia and major histocompatibility complex class II. (7588330)
1995
34
The rat T-cell lymphopenia resistance gene (Lyp) maps between D4Mit6 and Npy on RN04. (7626892)
1995
35
Idiopathic CD4+ T lymphopenia in older persons. (7983295)
1994
36
Mechanisms of tumor necrosis factor alpha-induced lymphopenia, neutropenia, and biphasic neutrophilia: a study of lymphocyte recirculation and hematologic interactions of TNF alpha with endogenous mediators of leukocyte trafficking. (2492593)
1989
37
Lymphopenia in primary degenerative dementia. (2561401)
1989
38
Early lymphopenia in burned children with and without the toxic shock syndrome. (3390733)
1988
39
Lymphopenia in histiocytic medullary reticulosis. (6851438)
1983
40
Corticosteroid-induced lymphopenia, immunosuppression, and body defense. (345907)
1978
41
Acute lymphopenia, stress, and plasma cortisol. (1167069)
1975
42
Chondroitin-6-sulfate mucopoly-saccharidosis in conjunction with lymphopenia, defective cellular immunity and the nephrotic syndrome. (4282260)
1974
43
The development of lymphopenia in uremic patients undergoing extracorporeal irradiation of the blood with portable beta units. (4767134)
1973
44
Immunologic amnesia. Study of an 11-year-old girl with recurrent severe infections associated with dysgammaglobulinemia, lymphopenia and lymphocytotoxic antibody, resulting in loss of immunologic memory. (4170529)
1968
45
Studies of a method of inducing specific lymphopenia in dogs. (5897788)
1965
46
SELECTIVE LYMPHOPENIA BY USE OF INTRALYMPHATIC 198-AU AND SPLENECTOMY. IMMUNOSUPPRESSIVE ACTION ON REJECTION OF CANINE RENAL HOMOGRAFTS. (14314453)
1965
47
Lymphopenia in diagnosis of the acute abdomen. (14923662)
1952
48
Observations upon the lymphopenia of x-ray irradiation. Part II. (14886582)
1951
49
Relation of cortisone-induced lymphopenia to transplanted sarcoma in hamsters. (14874124)
1951
50
A lymphopenia-causing agent, probably a virus, found in mice after injection with tumor tissue and with the cell-free filtrates of lymphosarcoma T 86157 (MB). (18150968)
1949

Genetic Variations for Lymphopenia

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Expression for genes affiliated with Lymphopenia

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Sources:
1BioGPS, 15Gene Expression Omnibus DataSets
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Expression patterns in normal tissues for genes affiliated with Lymphopenia

Search GEO for disease gene expression data for Lymphopenia.

Pathways for genes affiliated with Lymphopenia

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Sources:
53Reactome, 52R&D Systems, 37NCBI BioSystems Database, 29KEGG, 51QIAGEN, 12EMD Millipore, 4Cell Signaling Technology
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Pathways related to Lymphopenia according to GeneCards/GeneDecks:

(show all 41)
idSuper pathways (with members indented)ScoreTop Affiliating Genes
110.4IL2RG, IL7
2
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10.4IL7, IL2RG
310.4JAK3, IL7R
4
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10.4ADA, PNP
510.3CD59, IL7R, IL7
6
Cytokine production by Th17 cells in CF (Mouse model)
10.3IL2RG, JAK3, FOXP3
710.3IL2RG, JAK3, LCK
810.3IL2RG, IL2RB, FASLG
9
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10.3JAK3, CD28, IL2RG
10
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10.3IL2RG, IL2RB, IL7, IL7R
11
Hide members
10.3LCK, ZAP70, CD28
12
Immune response NFAT in immune response
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10.3CD28, ZAP70, LCK
13
Immune response ICOS pathway in T-helper cell
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10.3CD28, ZAP70, LCK
1410.3CD28, ZAP70, LCK
15
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10.3LCK, JAK3, IL2RB, IL2RG
16
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10.3LCK, JAK3, IL2RB, IL2RG
17
Immune response IL-2 activation and signaling pathway
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10.3LCK, JAK3, IL2RB, IL2RG
1810.3IL2RG, IL2RB, CD28, JAK3
19
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10.3LCK, FASLG, IL2RB, IL2RG
20
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10.2LCK, ZAP70, CD28, PTPN22
21
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10.2CD28, ZAP70, JAK3, LCK
22
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10.2FASLG, CIITA, CD28, IL15
23
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10.2LCK, FASLG, JAK3, ZAP70, IL2RG
24
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10.2FOXP3, FASLG, IL15, IL2RB, IL2RG
2510.2LCK, JAK3, IL15, IL2RB, IL2RG
26
Hide members
10.2LCK, ZAP70, CD28, IL2RB, IL2RG
2710.2LCK, ZAP70, CD28, IL2RB, IL2RG
2810.2FASLG, JAK3, IL7R, IL7, IL2RB, IL2RG
29
Hide members
10.2LCK, JAK3, IL7R, IL7, IL2RB, IL2RG
3010.2JAK3, IL15, IL7R, IL7, IL2RB, IL2RG
31
Hide members
10.2JAK3, IL15, IL7R, IL7, IL2RB, IL2RG
32
Hide members
10.2LCK, FOXP3, FASLG, JAK3, IL2RB, IL2RG
3310.1ADA, LCK, CIITA, ZAP70, IL7R, IL2RG
34
Hide members
10.1FASLG, JAK3, CD28, IL15, IL7R, IL2RG
35
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10.1LCK, JAK3, CIITA, IL7R, IL7, IL2RB
36
Hide members
10.1CD28, IL15, IL7R, IL7, IL2RB, IL2RG
37
Hide members
10.1FASLG, JAK3, CIITA, CD28, IL15, IL2RB
38
Hide members
10.0JAK3, ZAP70, CD28, IL15, IL7R, IL7
3910.0LCK, FOXP3, FASLG, CIITA, ZAP70, IL2RB
40
Hide members
10.0LCK, JAK3, ZAP70, CD28, IL15, IL7R
41
Hide members
9.9LCK, JAK3, CIITA, ZAP70, CD59, CD28

Compounds for genes affiliated with Lymphopenia

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Sources:
44Novoseek, 49PharmGKB, 11DrugBank, 59Tocris Bioscience, 28IUPHAR, 24HMDB, 2BitterDB
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Compounds related to Lymphopenia according to GeneCards/GeneDecks:

(show top 50)    (show all 98)
idCompoundScoreTop Affiliating Genes
1pge24410.9JAK3
2ctla4-ig4410.7CD28, IL15, IL7, IL2RB
3thiosemicarbazide4410.7LCK, ZAP70, IL2RB
4serine4410.6LCK, JAK3, CIITA, IL2RB
5fitc4410.6ZAP70, CD59, IL2RB, SELL
6enterotoxin4410.6LBR, CIITA, ZAP70, CD28
7leflunomide49 44 1112.6IL2RB, IL15, JAK3, LCK
8cycloheximide4410.6LCK, FASLG, JAK3, IL2RB, SELL
9c-d4t4410.6IL7, IL15, FASLG
10okt34410.6LCK, LBR, ZAP70, IL15, IL7, IL2RB
11fludarabine44 1111.6FASLG, ZAP70, PNP, ADA
12bromodeoxyuridine4410.5IL7, IL15, CIITA, LBR, FASLG
13herbimycin a44 5911.5LCK, JAK3, CD28, IL7R, SELL
14phenylalanine4410.5LCK, LBR, JAK3, CIITA, ZAP70, CD28
15cyclophosphamide44 49 1112.5FASLG, ZAP70, IL15, IL7, IL2RB
16heparin44 28 11 2413.5LCK, FASLG, LBR, ZAP70, IL7, SELL
17basiliximab44 1111.5IL15, IL7, IL2RB
18rantes4410.5FASLG, LBR, CIITA, IL15, IL7, IL2RB
19rituximab44 49 1112.5FASLG, ZAP70, CD59, IL15
20lactate4410.5FASLG, ZAP70, CD59, IL2RB, PNP, SELL
21histamine44 28 2412.5LBR, IL15, IL7, IL2RB, SELL, ADA
22glucose4410.5LCK, FASLG, LBR, CD59, PNP
23didanosine44 1111.5ADA, PNP, LBR
24tuberculin4410.5LBR, IL15, ADA
25phosphotyrosine4410.5LCK, JAK3, CIITA, ZAP70, CD28, IL7R
26oxygen44 2411.5LCK, CIITA, ZAP70, CD59, CD28, IL2RB
27tacrolimus44 49 1112.5FASLG, CD28, IL15, IL7, IL2RB
28thymidine44 2411.4FASLG, LBR, CIITA, ZAP70, IL15, IL7
29phosphatidylserine44 28 1112.4SELL, IL2RB, ZAP70, FASLG, LCK
30estrogen4410.4JAK3
31genistein44 28 59 2 11 2415.4LCK, FASLG, LBR, JAK3, ZAP70, CD28
32nitric oxide44 11 2412.4FOXP3, FASLG, LBR, JAK3, CIITA, IL15
33vegf4410.4LCK, FASLG, JAK3, IL15, IL7, IL2RB
34purine44 2411.4LBR, ZAP70, PNP, ADA
35h2o24410.4LCK, FASLG, LBR, ZAP70, PNP, SELL
36ionomycin4410.4LCK, SELL, RAG1, IL2RB, IL7, IL7R
37rapamycin4410.4LCK, FOXP3, FASLG, LBR, CD28, IL15
38gtp44 2811.3LCK, CIITA, ZAP70, CD28, IL2RB, PNP
39alanine4410.3LCK, FASLG, CIITA, IL15, IL7, IL2RB
40cysteine4410.3LCK, FASLG, LBR, CIITA, CD28, IL15
41lipid4410.3LCK, LBR, JAK3, CIITA, ZAP70, CD59
4212-o-tetradecanoylphorbol 13-acetate4410.3RAG1, IL2RB, IL7, LBR, LCK
43phosphatidylinositol4410.3LCK, FASLG, JAK3, CIITA, ZAP70, CD59
44dexamethasone44 49 28 1113.2ZAP70, CIITA, LBR, FASLG, LCK, CD28
45cuprophan4410.2SELL, IL2RB, LBR
46cyclosporin a44 28 5912.2LCK, FOXP3, FASLG, ADA, IL2RG, IL2RB
47cyclic amp44 2411.2LCK, LBR, CD28, IL2RB, ADA
48calcium44 49 11 2413.2LCK, FASLG, LBR, JAK3, CIITA, ZAP70
49tyrosine4410.1CD59, ZAP70, CIITA, JAK3, LBR, FASLG
50polysulfone4410.0SELL, IL2RB, FASLG

GO Terms for genes affiliated with Lymphopenia

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16Gene Ontology
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Cellular components related to Lymphopenia according to GeneCards/GeneDecks:

idNameGO IDScoreTop Affiliating Genes
1integral to plasma membraneGO:00588710.1SELL, IL2RG, IL2RB, IL15, CD28, FASLG
2cytoplasmic membrane-bounded vesicle lumenGO:06020510.1FASLG, ADA
3external side of plasma membraneGO:00989710.0ADA, SELL, IL2RG, IL2RB, IL7R, CD28

Biological processes related to Lymphopenia according to GeneCards/GeneDecks:

(show all 23)
idNameGO IDScoreTop Affiliating Genes
1interleukin-7-mediated signaling pathwayGO:03811110.7IL2RG, IL7R
2interleukin-2-mediated signaling pathwayGO:03811010.7IL2RB, IL2RG
3negative regulation of thymocyte apoptotic processGO:07024410.7ADA, RAG1, JAK3
4interleukin-4-mediated signaling pathwayGO:03577110.7IL2RG, JAK3
5T cell homeostasisGO:04302910.7RAG1, JAK3, FOXP3
6positive regulation of alpha-beta T cell differentiationGO:04663810.6ADA, PNP, ZAP70
7negative regulation of interleukin-10 productionGO:03269310.6JAK3, FOXP3
8T cell differentiationGO:03021710.6LCK, ZAP70, IL7R, PTPN22
9T cell activationGO:04211010.6ADA, ZAP70, FOXP3
10regulation of T cell differentiationGO:04558010.6RAG1, IL15
11T cell receptor signaling pathwayGO:05085210.6LCK, FOXP3, ZAP70, PTPN22
12positive regulation of T cell proliferationGO:04210210.6CD59, CD28, IL15, PNP
13peptidyl-tyrosine phosphorylationGO:01810810.6LCK, JAK3, ZAP70
14positive regulation of T cell receptor signaling pathwayGO:05086210.5ADA, LCK
15positive regulation of T cell differentiation in thymusGO:03308910.5IL7R, ADA
16positive regulation of alpha-beta T cell proliferationGO:04664110.5CD28, ZAP70
17negative thymic T cell selectionGO:04506010.5CD28, ZAP70
18negative regulation of T cell activationGO:05086810.4PTPN22, JAK3
19immune responseGO:00695510.4PNP, FASLG, CIITA, ZAP70, IL15, IL7R
20purine-containing compound salvageGO:04310110.4ADA, PNP
21lymph node developmentGO:04853510.4IL15, IL7R
22positive regulation of T cell differentiationGO:04558210.3ZAP70, IL7
23agingGO:00756810.0ADA, IL15, LCK

Molecular functions related to Lymphopenia according to GeneCards/GeneDecks:

idNameGO IDScoreTop Affiliating Genes
1interleukin-7 receptor activityGO:00491710.5IL2RG, IL7R
2interleukin-2 bindingGO:01997610.4IL2RG, IL2RB
3protein tyrosine kinase activityGO:00471310.3LCK, JAK3, ZAP70
4interleukin-2 receptor activityGO:00491110.3IL2RB, IL2RG
5non-membrane spanning protein tyrosine kinase activityGO:00471510.0LCK, JAK3, ZAP70
6protein bindingGO:0055159.7IL2RG, SELL, PTPN22, RAG1, ZAP70, IL7

Products for genes affiliated with Lymphopenia

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Sources for Lymphopenia

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3CDC
13ExPASy
14FMA
22GTR
23HGMD
24HMDB
25ICD10
26ICD10 via Orphanet
27ICD9CM
28IUPHAR
29KEGG
34MeSH
35MESH via Orphanet
36MGI
39NCIt
40NDF-RT
43NINDS
44Novoseek
46OMIM
47OMIM via Orphanet
50PubMed
51QIAGEN
57SNOMED-CT via Orphanet
60UMLS
61UMLS via Orphanet