Sources: 12Gene Ontology See all sources |
Cellular components related to malignant glioma according to GeneDecks: (show all 15)
| id | Name | GO ID | Score | Top Affiliating Genes | | 1 | cytoplasm | GO:005737 | 15.9 | PVR, EGFR, WT1, WWTR1, RHOH, SKIL | | 2 | nucleus | GO:005634 | 15.2 | NF2, NF1, RPS6KB1, RPS6, NOS2, SMAD7 | | 3 | plasma membrane | GO:005886 | 15.1 | ULBP3, BRAF, BSG, VIM, SERPINE1, SFRP1 | | 4 | cytosol | GO:005829 | 13.7 | STAT6, RNASEL, NFKBIA, NGFR, RPS6KB1, RPS6 | | 5 | integral to plasma membrane | GO:005887 | 12.2 | PDGFRA, NGFR, PLAUR, SSTR2, DDR1, TNFSF10 | | 6 | nucleoplasm | GO:005654 | 12.1 | PSMC4, WWTR1, SKIL, SKI, NGFR, SMAD7 | | 7 | cell surface | GO:009986 | 11.9 | CSPG4, PDGFA, NGFR, RPS6KB1, PLAUR, PLAU | | 8 | proteinaceous extracellular matrix | GO:005578 | 11.3 | TNC, TNFRSF11B, DMBT1, SPARC, LTBP1, TGFB1 | | 9 | extracellular region | GO:005576 | 11.2 | TIMP1, PLAT, NRP1, NTF3, SPARC, DDR1 | | 10 | cyclin-dependent protein kinase holoenzyme complex | GO:000307 | 10.7 | CCND3, CCND2, CDK4, CDK2, CDKN1A, CDK6 | | 11 | membrane raft | GO:045121 | 10.5 | TNF, TNFRSF1A, EGFR, HK1, PRKCA, CXADR | | 12 | extracellular matrix | GO:031012 | 10.5 | LTBP1, TIMP3, THBS1, TGFB2, DCN, SOD1 | | 13 | extracellular space | GO:005615 | 10.2 | MMP7, VEGFA, SERPINE1, SEMA3C, SFRP2, SFRP1 | | 14 | platelet alpha granule lumen | GO:031093 | 10.0 | PDGFB, EGF, TIMP1, THBS1, TGFB1, TGFB2 | | 15 | external side of plasma membrane | GO:009897 | 9.6 | ANPEP, IFNG, ICAM1, TNF, CTSB, THBS1 |
Biological processes related to malignant glioma according to GeneDecks: (show top 50)
(show all 82)
| id | Name | GO ID | Score | Top Affiliating Genes | | 1 | apoptotic process | GO:006915 | 13.8 | SEMA3A, VIM, BNIP3, RAF1, RAC1, BIRC5 | | 2 | signal transduction | GO:007165 | 13.6 | PIK3CB, KIT, KITLG, RCVRN, RAF1, BCR | | 3 | virus-host interaction | GO:019048 | 13.0 | RB1, VIM, BNIP3, BECN1, KDR, ULBP3 | | 4 | cell proliferation | GO:008283 | 12.6 | KITLG, PCNA, RAF1, BCL2L1, LHX9, LGI1 | | 5 | induction of apoptosis by intracellular signals | GO:008629 | 12.0 | BNIP3, MYC, BCL2, BCL2L1, BAX, XIAP | | 6 | positive regulation of cell migration | GO:030335 | 11.9 | VEGFA, KDR, FURIN, ITGAV, MMP14, FLT1 | | 7 | induction of apoptosis | GO:006917 | 11.6 | BNIP3, BAX, CDKN2C, CDKN1B, CDKN2A, FASLG | | 8 | positive regulation of gene expression | GO:010628 | 11.5 | KIT, BRAF, VEGFA, MT3, CDC42, CD44 | | 9 | angiogenesis | GO:001525 | 11.5 | PIK3CA, PIK3CG, SETD2, SERPINE1, VEGFA, KDR | | 10 | activation of pro-apoptotic gene products | GO:008633 | 11.4 | MYC, BCL2, BAX, FASLG, FADD, FAS | | 11 | activation of cysteine-type endopeptidase activity involved in apoptotic process | GO:006919 | 11.3 | MYC, BAX, CDKN1B, CDKN2A, FASLG, FADD | | 12 | nerve growth factor receptor signaling pathway | GO:048011 | 11.3 | PIK3CB, PIK3CA, BRAF, RAF1, RAC1, MTOR | | 13 | positive regulation of endothelial cell proliferation | GO:001938 | 11.3 | VEGFA, BMP6, KDR, MTOR, JUN, ITGB3 | | 14 | response to ethanol | GO:045471 | 11.3 | BCL2, MMP9, MGMT, IL13, IL4, CCL2 | | 15 | cell cycle arrest | GO:007050 | 11.3 | RB1, MYC, MSH2, CDK6, CDKN1A, CDKN2C | | 16 | G1 phase of mitotic cell cycle | GO:000080 | 11.2 | RB1, RBL2, CDK6, CDKN1A, CDKN2C, CDKN2B | | 17 | positive regulation of angiogenesis | GO:045766 | 11.2 | SFRP2, SERPINE1, VEGFA, KDR, CHI3L1, MTDH | | 18 | immune response | GO:006955 | 11.1 | VTN, SEMA3C, BMP6, BMPR1A, RAET1E, ULBP1 | | 19 | response to wounding | GO:009611 | 11.1 | VWF, RAC1, FN1, MET, MDK, F2 | | 20 | positive regulation of ERK1 and ERK2 cascade | GO:070374 | 11.1 | BRAF, KDR, CHI3L1, MT3, CD44, MIF | | 21 | positive regulation of phosphatidylinositol 3-kinase cascade | GO:014068 | 11.0 | KIT, KDR, FLT1, FGFR1, ANGPT1, IGF1 | | 22 | positive regulation of fibroblast proliferation | GO:048146 | 11.0 | MYC, JUN, CDK6, CDKN1A, CDK4, MIF | | 23 | heart development | GO:007507 | 11.0 | PCNA, RAF1, CASP7, CASP3, CASP8, GJA1 | | 24 | response to hypoxia | GO:001666 | 11.0 | VEGFA, BNIP3, RAF1, BCL2, KCNMA1, MT3 | | 25 | protein autophosphorylation | GO:046777 | 10.9 | KIT, KDR, MTOR, FLT1, FGFR1, FGFR4 | | 26 | anti-apoptosis | GO:006916 | 10.9 | PIK3CA, BRAF, VHL, BNIP3, BIRC5, BECN1 | | 27 | phosphatidylinositol-mediated signaling | GO:048015 | 10.8 | PIK3CB, PIK3CA, PCNA, MTOR, CDKN1B, GSK3B | | 28 | response to organic cyclic compound | GO:014070 | 10.8 | SFRP1, MSH2, JUN, CDKN1A, MET, IL1A | | 29 | positive regulation of peptidyl-tyrosine phosphorylation | GO:050731 | 10.8 | KITLG, VTN, VEGFA, MTOR, CD36, CD80 | | 30 | positive regulation of protein kinase B signaling cascade | GO:051897 | 10.7 | PIK3CG, CHI3L1, MTDH, MTOR, ANGPT1, IGF1 | | 31 | negative regulation of apoptotic process | GO:043066 | 10.6 | PIK3CG, SFRP1, SERPINE1, BRAF, VEGFA, MYC | | 32 | response to drug | GO:042493 | 10.5 | SFRP1, SFRP2, SEMA3C, MYC, BCL2, LGALS1 | | 33 | positive regulation of apoptotic process | GO:043065 | 10.5 | SFRP1, SFRP2, KCNMA1, BAX, MMP9, IL1B | | 34 | blood coagulation | GO:007596 | 10.4 | PIK3CB, PIK3CA, PIK3CG, VWF, SERPINE1, BSG | | 35 | positive regulation of DNA replication | GO:045740 | 10.4 | KITLG, JUN, CDC42, MET, IL3, IGF1R | | 36 | positive regulation of cell proliferation | GO:008284 | 10.4 | KIT, SFRP1, SFRP2, VEGFA, MYC, BIRC5 | | 37 | aging | GO:007568 | 10.3 | FURIN, JUN, IL1B, FAS, CCL2, F3 | | 38 | positive regulation of MAP kinase activity | GO:043406 | 10.2 | PIK3CG, KITLG, VEGFA, FLT1, FGFR1, ERBB2 | | 39 | negative regulation of cell proliferation | GO:008285 | 10.1 | SFRP1, SFRP2, VHL, RAF1, BECN1, JUN | | 40 | response to mechanical stimulus | GO:009612 | 10.0 | CHI3L1, JUN, MMP9, ANGPT2, CCL2, F3 | | 41 | positive regulation of peptidyl-serine phosphorylation | GO:033138 | 9.9 | PIK3CA, SFRP2, BRAF, VEGFA, RAF1, BCL2 | | 42 | platelet degranulation | GO:002576 | 9.9 | VWF, SERPINE1, VEGFA, CD36, ITGB3, FN1 | | 43 | activation of MAPK activity | GO:000187 | 9.9 | PIK3CB, KIT, FPR1, FGF2, MET, IL1B | | 44 | transforming growth factor beta receptor signaling pathway | GO:007179 | 9.7 | SERPINE1, MYC, BMPR1A, PARP1, FURIN, JUN | | 45 | negative regulation of transcription from RNA polymerase II promoter | GO:000122 | 9.6 | VHL, MYC, ZFP36, PARP1, CIITA, MTDH | | 46 | positive regulation of transcription, DNA-dependent | GO:045893 | 9.3 | SFRP1, RB1, VHL, MYC, BMP7, BMPR1A | | 47 | platelet activation | GO:030168 | 9.0 | PIK3CB, PIK3CA, PIK3CG, VWF, SERPINE1, VEGFA | | 48 | positive regulation of smooth muscle cell proliferation | GO:048661 | 8.9 | JUN, FLT1, IL13, IL6, IGF1, TNF | | 49 | inflammatory response | GO:006954 | 8.9 | PIK3CG, KIT, BMP6, BMPR1B, RAC1, CHI3L1 | | 50 | positive regulation of transcription from RNA polymerase II promoter | GO:045944 | 8.3 | SFRP2, RB1, SERPINE1, VEGFA, MYC, BMP6 |
Molecular functions related to malignant glioma according to GeneDecks: (show all 13)
| id | Name | GO ID | Score | Top Affiliating Genes | | 1 | protein binding | GO:005515 | 17.0 | PECAM1, EFEMP1, EFNA1, ADM, HDAC1, HDAC9 | | 2 | ATP binding | GO:005524 | 12.9 | KIT, BRAF, BMPR1A, BMPR1B, RAF1, CLCN3 | | 3 | receptor activity | GO:004872 | 11.7 | TNFRSF10B, TNFRSF11B, TNFRSF6B, NRP2, PLAUR, PLXNC1 | | 4 | protein kinase binding | GO:019901 | 11.6 | TP53, TP73, PTEN, PTK2, SMAD3, RPS6 | | 5 | protein heterodimerization activity | GO:046982 | 11.4 | PDGFB, PDGFA, SRI, TP53, ERBB2, EGFR | | 6 | identical protein binding | GO:042802 | 11.2 | TP53, ERBB2, AKT1, CASP8, IGF1R, FAS | | 7 | enzyme binding | GO:019899 | 10.9 | HIF1A, H2AFX, EGFR, NFKBIA, PLAUR, TOP2A | | 8 | receptor binding | GO:005102 | 10.9 | NOS2, PLXNC1, NTF3, SRI, TNFSF10, TNC | | 9 | collagen binding | GO:005518 | 10.8 | SMAD7, PDGFA, PDGFB, DCN, CSPG4, SMAD4 | | 10 | protein homodimerization activity | GO:042803 | 10.3 | PDGFRA, PDGFB, PDGFA, NOS2, SMAD4, SMAD3 | | 11 | transcription factor binding | GO:008134 | 10.3 | DNMT1, HIF1A, NFKBIA, NFIA, SMAD3, STAT3 | | 12 | growth factor activity | GO:008083 | 9.4 | IGF1, NUDT6, CSF2, CSF3, EFEMP1, HGF | | 13 | cytokine activity | GO:005125 | 9.0 | KITLG, VEGFA, BMP6, BMP7, MIF, IFNB1 |
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