Sources: 12Gene Ontology See all sources |
Cellular components related to malignant mesothelioma according to GeneDecks: (show all 13)
| id | Name | GO ID | Score | Top Affiliating Genes | | 1 | integral to plasma membrane | GO:005887 | 10.6 | PDGFRB, PDPN, ABCC1, ABCC2, ABCC3, ABCC5 | | 2 | catenin complex | GO:016342 | 10.6 | CTNNB1, CTNNA1, CDH1, CDH2, JUP | | 3 | cell-cell adherens junction | GO:005913 | 10.3 | CTNNB1, APC, ITGA6, CDH1, CDH3, CDH2 | | 4 | cell surface | GO:009986 | 10.0 | RPS6KB1, NGFR, PDGFA, TIMP2, THBD, TGFA | | 5 | nucleolus | GO:005730 | 9.7 | NF2, NOS3, PPP2R4, SP1, TP63, TP53 | | 6 | plasma membrane | GO:005886 | 8.7 | PLAUR, PLXNA1, NOS3, NGFR, NF2, PDGFRB | | 7 | nucleoplasm | GO:005654 | 8.7 | SP1, TP63, TP53, TXN, ERCC2, ESR2 | | 8 | cytoplasm | GO:005737 | 8.7 | PYCARD, DAPK1, SP1, CTNNB1, PPP2R4, SNAI2 | | 9 | membrane | GO:016020 | 8.6 | ESR1, CTNNB1, NRP2, PDGFRB, EGFR, ABCC1 | | 10 | extracellular region | GO:005576 | 7.7 | PLAUR, PLAU, SPP1, TNFSF10, TNFRSF1B, TXN | | 11 | cytosol | GO:005829 | 7.7 | PPP1R15A, CTNNB1, CTNNA1, CYCS, PYCARD, TP53 | | 12 | nucleus | GO:005634 | 7.3 | TP53, TP63, CYCS, SP1, CTNNB1, PPP2R4 | | 13 | extracellular space | GO:005615 | 6.4 | HGF, SPP1, TNXB, TNFSF10, IFNG, IFNB1 |
Biological processes related to malignant mesothelioma according to GeneDecks: (show top 50)
(show all 54)
| id | Name | GO ID | Score | Top Affiliating Genes | | 1 | cell junction assembly | GO:034329 | 11.2 | KRT14, KRT5, CTNNA1, FERMT2, ITGB4, ITGA6 | | 2 | activation of cysteine-type endopeptidase activity involved in apoptotic process | GO:006919 | 10.9 | EIF2AK3, BCL2L11, BAX, CDKN2A, IFNB1, CASP8 | | 3 | vascular endothelial growth factor receptor signaling pathway | GO:048010 | 10.8 | PGF, PDGFRB, NRP2, FLT4, FLT1, KDR | | 4 | odontogenesis of dentin-containing tooth | GO:042475 | 10.8 | GATA6, NF2, CTNNA1, TP63, ITGA6, BAX | | 5 | positive regulation of phosphatidylinositol 3-kinase cascade | GO:014068 | 10.8 | HGF, TGFB2, PDGFRB, PDGFA, CAT, FLT1 | | 6 | cellular response to mechanical stimulus | GO:071260 | 10.6 | PTGER4, TNFRSF10B, TNFRSF10A, CASP8, MAPK8, CHEK1 | | 7 | cell adhesion | GO:007155 | 10.6 | IL2, APC, TNXB, SPP1, CTNNA1, CTNNB1 | | 8 | male gonad development | GO:008584 | 10.5 | GATA6, WT1, CTNNA1, MET, MSH2, BCL2L11 | | 9 | cell-cell junction organization | GO:045216 | 10.5 | TGFB2, NF2, CTNNA1, CDH15, CDH1, CDH3 | | 10 | G1 phase of mitotic cell cycle | GO:000080 | 10.5 | CCNH, CDK4, CDKN1C, CDKN2A, CDKN2B, CDKN1A | | 11 | positive regulation of cell division | GO:051781 | 10.4 | PGF, TGFB2, TGFA, PDGFA, CAT, APC | | 12 | positive regulation of endothelial cell proliferation | GO:001938 | 10.4 | PGF, NRP2, FGF2, FLT4, MTOR, KDR | | 13 | peptidyl-tyrosine phosphorylation | GO:018108 | 10.4 | CSF1R, SYK, EGF, PDGFRB, FLT4, FLT1 | | 14 | ovarian follicle development | GO:001541 | 10.4 | CTNNA1, ESR2, BAX, BCL2L1, BCL2, KDR | | 15 | replicative senescence | GO:090399 | 10.4 | TP53, MME, CDKN2A, CDKN1A, CHEK2, CHEK1 | | 16 | response to hyperoxia | GO:055093 | 10.3 | PDPN, NOS3, CAT, MMP9, CDKN1A, SFTPB | | 17 | positive regulation of angiogenesis | GO:045766 | 10.3 | KDR, CD34, MMP9, FLT1, FGF1, FGF2 | | 18 | protein autophosphorylation | GO:046777 | 10.3 | PDGFRB, EGFR, EIF2AK3, SYK, CSF1R, SIK2 | | 19 | activation of pro-apoptotic gene products | GO:008633 | 10.2 | TNFSF10, TNFRSF10B, CASP8, MAPK8, BAX, BCL2L11 | | 20 | phosphatidylinositol-mediated signaling | GO:048015 | 10.2 | CSF1R, TYMS, PDGFRB, RPS6KB1, CASP9, IGF1R | | 21 | positive regulation of MAPK cascade | GO:043410 | 10.2 | PDGFA, PTPRC, IL6, FLT4, FLT1, CDH2 | | 22 | extracellular matrix disassembly | GO:022617 | 10.1 | TIMP2, MMP9, MMP3, MMP2, MMP14, MMP10 | | 23 | induction of apoptosis | GO:006917 | 10.1 | TNFRSF10A, TNFSF10, PYCARD, DAPK1, WT1, TGFB2 | | 24 | positive regulation of cell migration | GO:030335 | 10.1 | PDGFA, PDGFRB, PDPN, EGFR, ABCC1, CSF1R | | 25 | positive regulation of gene expression | GO:010628 | 10.1 | NKX2-1, TGFB2, KRAS, PLAUR, MAPK8, MET | | 26 | response to DNA damage stimulus | GO:006974 | 10.1 | APC, MCM7, CASP3, CASP9, TP53, PPP1R15A | | 27 | cell-cell adhesion | GO:016337 | 10.0 | EGFR, PDPN, CTNNB1, TNXB, ITGA6, CDH1 | | 28 | cell proliferation | GO:008283 | 9.9 | PDPN, EGFR, TGFA, TGFB2, SYK, STAT3 | | 29 | neuron apoptotic process | GO:051402 | 9.9 | GAPDH, TP63, TP53, CASP3, BAX, BCL2 | | 30 | anti-apoptosis | GO:006916 | 9.9 | ANXA5, IGF1R, HSP90B1, DAPK1, NOS3, NGFR | | 31 | release of cytochrome c from mitochondria | GO:001836 | 9.9 | TP53, CASP3, BAX, BCL2L1, BCL2, SOD2 | | 32 | induction of apoptosis by intracellular signals | GO:008629 | 9.8 | CASP3, CASP8, CASP9, TP53, CYCS, MAPK8 | | 33 | positive regulation of MAP kinase activity | GO:043406 | 9.8 | EGFR, EGF, KRAS, PDGFRB, PDGFA, FLT1 | | 34 | positive regulation of apoptotic process | GO:043065 | 9.8 | TNFSF10, PYCARD, PTPRC, CTNNB1, PPP2R4, NOS3 | | 35 | negative regulation of cell growth | GO:030308 | 9.7 | TGFB2, WT1, TP53, ESR2, GREM1, FGF2 | | 36 | response to hypoxia | GO:001666 | 9.6 | CAT, ERCC2, NOS2, NOS3, TGFB2, PGF | | 37 | negative regulation of cell proliferation | GO:008285 | 9.4 | IFNB1, TP53, CTNNB1, NOS3, NF2, WT1 | | 38 | cell cycle arrest | GO:007050 | 9.3 | APC, IFNG, TP53, PPP1R15A, TGFB2, IL8 | | 39 | positive regulation of transcription, DNA-dependent | GO:045893 | 9.3 | TP53, TP63, SP1, CTNNB1, WT1, EGF | | 40 | angiogenesis | GO:001525 | 9.2 | PDGFA, EGF, TGFA, TGFB2, SYK, PGF | | 41 | innate immune response | GO:045087 | 9.2 | IFNB1, HSP90B1, CASP8, TXN, PYCARD, SYK | | 42 | virus-host interaction | GO:019048 | 9.2 | TP53, SP1, KRT7, KRT19, KPNA2, SYK | | 43 | apoptotic process | GO:006915 | 9.0 | SEMA3A, FGF2, GREM1, APC, MCL1, MAPK8 | | 44 | response to drug | GO:042493 | 8.9 | NOS3, CTNNB1, IFNG, ENO2, RPS6KB1, ABCC1 | | 45 | negative regulation of apoptotic process | GO:043066 | 8.7 | PIK3CG, BTC, VEGFA, KDR, BCL2, ERCC2 | | 46 | positive regulation of transcription from RNA polymerase II promoter | GO:045944 | 8.4 | TP53, ERCC2, ESR1, IFNG, IFNB1, TP63 | | 47 | blood coagulation | GO:007596 | 8.3 | KRAS, PDGFA, NOS3, NOS2, EGF, THBD | | 48 | positive regulation of cell proliferation | GO:008284 | 8.2 | CDK4, EGF, EGFR, HCLS1, TGFB2, CSF1R | | 49 | cytokine-mediated signaling pathway | GO:019221 | 8.2 | KRAS, KPNA2, STAT3, STAT1, CSF1R, CSF3 | | 50 | signal transduction | GO:007165 | 8.1 | PLAUR, PLAU, PYCARD, TNXB, TNFSF10, TNFRSF10C |
Molecular functions related to malignant mesothelioma according to GeneDecks: (show all 15)
| id | Name | GO ID | Score | Top Affiliating Genes | | 1 | vascular endothelial growth factor-activated receptor activity | GO:005021 | 10.8 | PDGFRB, NRP2, FLT4, FLT1, KDR | | 2 | receptor activity | GO:004872 | 10.5 | THBD, NGFR, PLXNA1, PLAUR, NRP2, TNFRSF10B | | 3 | protein phosphatase binding | GO:019903 | 10.4 | EIF2AK3, EGFR, CTNNB1, HSP90B1, FLT4, CDH1 | | 4 | protein kinase binding | GO:019901 | 10.3 | CCNH, TP53, PTPRC, SYK, STAT3, GATA6 | | 5 | BH3 domain binding | GO:051434 | 10.1 | MCL1, BAX, BCL2L1, BCL2 | | 6 | cyclin-dependent protein kinase inhibitor activity | GO:004861 | 10.1 | CASP3, CDKN1C, CDKN2A, CDKN2B, CDKN1A | | 7 | protein heterodimerization activity | GO:046982 | 9.7 | MCL1, ENO2, TP53, PPP2R4, PDGFA, EGFR | | 8 | transcription factor binding | GO:008134 | 9.6 | STAT3, CTNNB1, SP1, TNFRSF10A, TP53, CD34 | | 9 | protein homodimerization activity | GO:042803 | 9.4 | PYCARD, SP1, PPP2R4, NOS2, PDGFA, TKT | | 10 | identical protein binding | GO:042802 | 9.1 | IGF1R, CASP8, ESR1, TP53, TP63, EGFR | | 11 | ATP binding | GO:005524 | 8.5 | EGFR, PDGFRB, RPS6KB1, PPP2R4, DAPK1, TP53 | | 12 | enzyme binding | GO:019899 | 8.2 | TP53, CTNNB1, PLAUR, EGFR, STAT1, CSF3 | | 13 | growth factor activity | GO:008083 | 8.1 | IL6, PDGFA, EGF, TGFA, TGFB2, CSF3 | | 14 | cytokine activity | GO:005125 | 8.0 | IFNA2, IFNB1, IFNG, TNFSF10, SPP1, TGFB2 | | 15 | protein binding | GO:005515 | 5.7 | IGF1R, PYCARD, PTGER4, PTPRC, DAPK1, CYCS |
|