OI2
MCID: OST080
MIFTS: 52

Osteogenesis Imperfecta, Type Ii (OI2) malady

Categories: Genetic diseases, Rare diseases, Bone diseases, Fetal diseases, Oral diseases

Aliases & Classifications for Osteogenesis Imperfecta, Type Ii

Aliases & Descriptions for Osteogenesis Imperfecta, Type Ii:

Name: Osteogenesis Imperfecta, Type Ii 54 52
Osteogenesis Imperfecta Type 2 12 50 56 14
Vrolik Type of Osteogenesis Imperfecta 12 50 66
Osteogenesis Imperfecta Congenita Perinatal Lethal Form 50 66
Osteogenesis Imperfecta Congenita 50 66
Osteogenesis Imperfecta Type Ii 12 50
Lethal Osteogenesis Imperfecta 50 56
Oi Type 2 50 56
Oi2 12 66
Perinatal Lethal Osteogenesis Imperfecta Congenita 12
Osteogenesis Imperfecta Type Ii Autosomal Dominant 66
Osteogenesis Imperfecta, Dominant Perinatal Lethal 69
Osteogenesis Imperfecta Type Iia 66
Osteogenesis Imperfecta 2 66
Perinatally Lethal Oi 50
Oi Type Iia 66
Oi, Type Ii 66
Oi-Iia 66
Oi-Ii 66
Oic 66

Characteristics:

Orphanet epidemiological data:

56
osteogenesis imperfecta type 2
Inheritance: Autosomal dominant,Autosomal recessive; Prevalence: 1-9/1000000 (Europe); Age of onset: Infancy,Neonatal; Age of death: early childhood;

HPO:

32
osteogenesis imperfecta, type ii:
Inheritance autosomal dominant inheritance


Classifications:



External Ids:

OMIM 54 166210
Disease Ontology 12 DOID:0110341
ICD10 33 Q78.0
Orphanet 56 ORPHA216804
ICD10 via Orphanet 34 Q78.0
MeSH 42 D010013

Summaries for Osteogenesis Imperfecta, Type Ii

UniProtKB/Swiss-Prot : 66 Osteogenesis imperfecta 2: An autosomal dominant form of osteogenesis imperfecta, a connective tissue disorder characterized by low bone mass, bone fragility and susceptibility to fractures after minimal trauma. Disease severity ranges from very mild forms without fractures to intrauterine fractures and perinatal lethality. Extraskeletal manifestations, which affect a variable number of patients, are dentinogenesis imperfecta, hearing loss, and blue sclerae. OI2 is characterized by bone fragility, with many perinatal fractures, severe bowing of long bones, undermineralization, and death in the perinatal period due to respiratory insufficiency.

MalaCards based summary : Osteogenesis Imperfecta, Type Ii, also known as osteogenesis imperfecta type 2, is related to perinatally lethal osteogenesis imperfecta and osteogenesis imperfecta congenita, microcephaly, and cataracts, and has symptoms including respiratory insufficiency, platyspondyly and thin skin. An important gene associated with Osteogenesis Imperfecta, Type Ii is COL1A2 (Collagen Type I Alpha 2 Chain), and among its related pathways/superpathways are Collagen chain trimerization and Degradation of the extracellular matrix. The drugs Cyclosporine and Cyclophosphamide have been mentioned in the context of this disorder. Affiliated tissues include bone, heart and skin, and related phenotypes are behavior/neurological and growth/size/body region

Disease Ontology : 12 An osteogenesis imperfecta that is characterized by bone fragility and perinatal lethality and has material basis in dominantly inherited mutations in the COL1A1 gene on chromosome 17q21.33 or the COL1A2 gene on chromosome 7q21.3.

OMIM : 54 Osteogenesis imperfecta type II constitutes a disorder characterized by bone fragility, with many perinatal fractures,... (166210) more...

Related Diseases for Osteogenesis Imperfecta, Type Ii

Diseases in the Osteogenesis Imperfecta family:

Osteogenesis Imperfecta, Type Viii Osteogenesis Imperfecta, Type Vii
Osteogenesis Imperfecta, Type Xvii Osteogenesis Imperfecta, Type Iv
Osteogenesis Imperfecta, Type Iii Osteogenesis Imperfecta, Type Ii
Osteogenesis Imperfecta, Type Xiii Osteogenesis Imperfecta, Type Xiv
Osteogenesis Imperfecta, Type V Osteogenesis Imperfecta, Type Xvi
Osteogenesis Imperfecta, Type X Osteogenesis Imperfecta, Type Xv
Osteogenesis Imperfecta, Type Xii Osteogenesis Imperfecta, Type Ix
Osteogenesis Imperfecta, Type Vi Osteogenesis Imperfecta, Type Xi
Osteogenesis Imperfecta, Type I Bmp1-Related Osteogenesis Imperfecta
Crtap-Related Osteogenesis Imperfecta Fkbp10-Related Osteogenesis Imperfecta
Ifitm5-Related Osteogenesis Imperfecta P3h1-Related Osteogenesis Imperfecta
Ppib-Related Osteogenesis Imperfecta Serpinf1-Related Osteogenesis Imperfecta
Serpinh1-Related Osteogenesis Imperfecta Sp7-Related Osteogenesis Imperfecta
Tmem38b-Related Osteogenesis Imperfecta Sparc-Related Osteogenesis Imperfecta
Wnt1-Related Osteogenesis Imperfecta

Diseases related to Osteogenesis Imperfecta, Type Ii via text searches within MalaCards or GeneCards Suite gene sharing:

(show all 40)
id Related Disease Score Top Affiliating Genes
1 perinatally lethal osteogenesis imperfecta 12.2
2 osteogenesis imperfecta congenita, microcephaly, and cataracts 12.0
3 osteogenesis imperfecta, type vii 11.0
4 osteogenesis imperfecta 10.4
5 cngb3-related stargardt disease 1 10.3 COL1A1 COL1A2
6 isolated lissencephaly type 1 without known genetic defects 10.3 COL1A1 COL1A2
7 charcot-marie-tooth neuropathy type 2a 10.3 COL1A1 COL1A2
8 prph2-related retinitis pigmentosa 10.3 COL1A1 COL1A2
9 20p13 microdeletion syndrome 10.3 COL1A1 COL1A2
10 epileptic encephalopathy, early infantile, 36 10.2 COL1A1 COL1A2
11 factor xiiia deficiency 10.2 COL1A1 COL1A2
12 osteogenesis imperfecta, type iii 10.2 COL1A1 COL1A2
13 cerebellar ataxia, mental retardation, and dysequilibrium syndrome 2 10.2 COL1A1 COL1A2
14 phyh-related refsum disease 10.2 CD36 COL1A1 COL1A2
15 long qt syndrome 1 10.2 CD36 COL1A1 COL1A2
16 muscle hypertrophy 10.2 CD36 COL1A1 COL1A2
17 ceroid lipofuscinosis, neuronal, 11 10.2 CD36 COL1A1 COL1A2
18 agraphia 10.2 CD36 COL1A1 COL1A2
19 neuropathy, distal hereditary motor, type iia 10.1 COL1A1 COL1A2 FGFR3
20 porphyria cutanea tarda 10.1 COL1A1 COL1A2 CRTAP P3H1
21 diabetic neuropathy 10.1 COL1A1 COL1A2 CRTAP P3H1
22 sclerocornea 10.1 CHD7 COL1A1 COL1A2
23 human herpesvirus 8 10.1 CD36 COL1A1 COL1A2 CRTAP
24 hypogonadotropic hypogonadism 2 with or without anosmia 10.1 ALPL COL1A1 FGFR3
25 mental retardation, autosomal recessive 35 10.0 CD36 COL1A1 COL1A2 FGFR3
26 maroteaux stanescu cousin syndrome 10.0 ALPL CD36
27 clivus meningioma 10.0 COL1A1 COL1A2 P3H1 PPIB
28 cervical spinal canal and spinal cord meningioma 10.0 CYP21A2 FGFR3
29 constipation 10.0
30 hypophosphatasia, childhood 10.0 ALPL COL1A1
31 autism susceptibility 16 9.9 COL1A1 COL1A2 CRTAP P3H1 PPIB
32 t cell immunodeficiency primary 9.9 COL1A1 FGFR3 SOX9
33 carnitine deficiency, systemic primary 9.9 ALPL CD36 COL1A1 COL1A2
34 hydrocephalus 9.8
35 xanthinuria 9.8 CD36 COL1A1 COL1A2 CRTAP P3H1 PPIB
36 ehlers-danlos syndrome, cardiac valvular form 9.8 CD36 COL1A1 COL1A2 CRTAP P3H1 PPIB
37 vulvovaginitis 9.8 ALPL COL1A1 FGFR3 SOX9
38 prostatocystitis 9.7 CD36 COL1A1 COL1A2 CRTAP FGFR3 P3H1
39 bone structure disease 9.5 COL1A1 COL1A2 CRTAP FGFR3 P3H1 PPIB
40 deafness, autosomal recessive 61 8.4 ALPL C1orf210 CD36 CHD7 COL1A1 COL1A2

Graphical network of the top 20 diseases related to Osteogenesis Imperfecta, Type Ii:



Diseases related to Osteogenesis Imperfecta, Type Ii

Symptoms & Phenotypes for Osteogenesis Imperfecta, Type Ii

Symptoms by clinical synopsis from OMIM:

166210

Clinical features from OMIM:

166210

Human phenotypes related to Osteogenesis Imperfecta, Type Ii:

32 (show all 21)
id Description HPO Frequency HPO Source Accession
1 respiratory insufficiency 32 HP:0002093
2 platyspondyly 32 HP:0000926
3 thin skin 32 HP:0000963
4 congestive heart failure 32 HP:0001635
5 wormian bones 32 HP:0002645
6 recurrent fractures 32 HP:0002757
7 abnormality of pelvic girdle bone morphology 32 HP:0002644
8 disproportionate short-limb short stature 32 HP:0008873
9 convex nasal ridge 32 HP:0000444
10 large fontanelles 32 HP:0000239
11 blue sclerae 32 HP:0000592
12 premature birth 32 HP:0001622
13 broad long bones 32 HP:0005622
14 tibial bowing 32 HP:0002982
15 small for gestational age 32 HP:0001518
16 crumpled long bones 32 HP:0006367
17 nonimmune hydrops fetalis 32 HP:0001790
18 beaded ribs 32 HP:0000923
19 absent ossification of calvaria 32 HP:0005623
20 multiple prenatal fractures 32 HP:0005855
21 pulmonary insufficiency 32 HP:0010444

MGI Mouse Phenotypes related to Osteogenesis Imperfecta, Type Ii:

44 (show all 12)
id Description MGI Source Accession Score Top Affiliating Genes
1 behavior/neurological MP:0005386 10.15 ALPL CD36 CHD7 COL1A1 COL1A2 FGFR3
2 growth/size/body region MP:0005378 10.1 ALPL CD36 CHD7 COL1A1 COL1A2 CRTAP
3 cellular MP:0005384 10.08 CHD7 COL1A1 COL1A2 FGFR3 NUMA1 SOX9
4 adipose tissue MP:0005375 10.05 ALPL CD36 CHD7 COL1A1 COL1A2 P3H1
5 craniofacial MP:0005382 9.93 SOX9 ALPL CHD7 COL1A1 FGFR3 PPIB
6 digestive/alimentary MP:0005381 9.91 ALPL CD36 CHD7 COL1A1 FGFR3 SOX9
7 limbs/digits/tail MP:0005371 9.86 FGFR3 P3H1 PPIB SOX9 ALPL CHD7
8 mortality/aging MP:0010768 9.81 ALPL CD36 CHD7 COL1A1 COL1A2 FGFR3
9 integument MP:0010771 9.8 COL1A1 COL1A2 FGFR3 P3H1 PPIB SOX9
10 hearing/vestibular/ear MP:0005377 9.77 CHD7 COL1A1 FGFR3 P3H1 SOX9
11 muscle MP:0005369 9.5 ALPL CD36 CHD7 COL1A1 COL1A2 P3H1
12 skeleton MP:0005390 9.32 ALPL CD36 CHD7 COL1A1 COL1A2 CRTAP

Drugs & Therapeutics for Osteogenesis Imperfecta, Type Ii

Drugs for Osteogenesis Imperfecta, Type Ii (from DrugBank, HMDB, Dgidb, PharmGKB, IUPHAR, NovoSeek, BitterDB):

(show all 12)
id Name Status Phase Clinical Trials Cas Number PubChem Id
1
Cyclosporine Approved, Investigational, Vet_approved Phase 1 79217-60-0, 59865-13-3 5284373 6435893
2
Cyclophosphamide Approved, Investigational Phase 1 50-18-0, 6055-19-2 2907
3
Busulfan Approved, Investigational Phase 1 55-98-1 2478
4
Miconazole Approved, Investigational, Vet_approved Phase 1 22916-47-8 4189
5 Alkylating Agents Phase 1
6 Dermatologic Agents Phase 1
7 Anti-Infective Agents Phase 1
8 Immunosuppressive Agents Phase 1
9 Antifungal Agents Phase 1
10 Antirheumatic Agents Phase 1
11 Antineoplastic Agents, Alkylating Phase 1
12 Calcineurin Inhibitors Phase 1

Interventional clinical trials:


id Name Status NCT ID Phase
1 Repeated Infusions of Mesenchymal Stromal Cells in Children With Osteogenesis Imperfecta Completed NCT01061099 Phase 1
2 Treatment of Severe Osteogenesis Imperfecta by Allogeneic Bone Marrow Transplantation Completed NCT00705120 Phase 1
3 Evaluation and Intervention for the Effects of Osteogenesis Imperfecta Recruiting NCT00001594

Search NIH Clinical Center for Osteogenesis Imperfecta, Type Ii

Genetic Tests for Osteogenesis Imperfecta, Type Ii

Anatomical Context for Osteogenesis Imperfecta, Type Ii

MalaCards organs/tissues related to Osteogenesis Imperfecta, Type Ii:

39
Bone, Heart, Skin

Publications for Osteogenesis Imperfecta, Type Ii

Articles related to Osteogenesis Imperfecta, Type Ii:

(show all 16)
id Title Authors Year
1
A case of osteogenesis imperfecta type II caused by a novel COL1A2 gene mutation: endoscopic third ventriculostomy to prevent hydrocephalus. ( 22911485 )
2012
2
Identification of a COL1A2 mutation with a deletion spanning coding and intronic sequence in exon 19 and intron 19 in a fetus with osteogenesis imperfecta type II. ( 22795120 )
2012
3
Osteogenesis imperfecta type II: prenatal diagnosis and association with increased nuchal translucency and hypoechogenicity of the cranium. ( 22795121 )
2012
4
Identification of a deletion mutation in the short flanking repeat region of exon 44 of the COL1A1 gene in a fetus with osteogenesis imperfecta type II. ( 22795119 )
2012
5
Prenatal diagnosis of osteogenesis imperfecta type II by three-dimensional computed tomography: the current state of fetal computed tomography. ( 23181495 )
2012
6
Prenatal diagnosis of osteogenesis imperfecta type II by three-dimensional ultrasound and computed tomography. ( 21450031 )
2011
7
The prevalence of thanatophoric dysplasia and lethal osteogenesis imperfecta type II in Northern Ireland - a complete population study. ( 22375084 )
2010
8
Mutation and polymorphism spectrum in osteogenesis imperfecta type II: implications for genotype-phenotype relationships. ( 18996919 )
2009
9
Osteogenesis imperfecta type II: fetal magnetic resonance imaging findings. ( 18931501 )
2008
10
A case of chondrodysplasia punctata with features of osteogenesis imperfecta type II. ( 11400945 )
2001
11
Abnormalities in central nervous system development in osteogenesis imperfecta type II. ( 9949218 )
1999
12
Osteogenesis imperfecta type II: microvascular changes in the CNS. ( 7671457 )
1995
13
Caudal block in a child with osteogenesis imperfecta, type II. ( 7489444 )
1995
14
First-trimester prenatal diagnosis of osteogenesis imperfecta type II by DNA analysis and sonography. ( 8415424 )
1993
15
SSCP detection of a Gly565Val substitution in the pro alpha 1(I) collagen chain resulting in osteogenesis imperfecta type II. ( 8100209 )
1993
16
Midtrimester diagnosis of osteogenesis imperfecta, type II. ( 7126785 )
1982

Variations for Osteogenesis Imperfecta, Type Ii

UniProtKB/Swiss-Prot genetic disease variations for Osteogenesis Imperfecta, Type Ii:

66 (show top 50) (show all 121)
id Symbol AA change Variation ID SNP ID
1 COL1A1 p.Gly275Asp VAR_001649
2 COL1A1 p.Gly389Arg VAR_001656
3 COL1A1 p.Gly398Asp VAR_001658
4 COL1A1 p.Gly422Cys VAR_001661
5 COL1A1 p.Gly425Ser VAR_001662
6 COL1A1 p.Gly434Val VAR_001663
7 COL1A1 p.Gly476Arg VAR_001664 rs57377812
8 COL1A1 p.Gly530Ser VAR_001666
9 COL1A1 p.Gly533Asp VAR_001667
10 COL1A1 p.Gly560Arg VAR_001670
11 COL1A1 p.Gly569Arg VAR_001672
12 COL1A1 p.Gly593Ser VAR_001674
13 COL1A1 p.Gly656Ser VAR_001676
14 COL1A1 p.Gly719Asp VAR_001679
15 COL1A1 p.Gly728Arg VAR_001681
16 COL1A1 p.Gly737Asp VAR_001682
17 COL1A1 p.Gly743Ser VAR_001683
18 COL1A1 p.Gly743Val VAR_001684
19 COL1A1 p.Gly764Val VAR_001685
20 COL1A1 p.Gly776Ser VAR_001687
21 COL1A1 p.Gly809Ser VAR_001688
22 COL1A1 p.Gly815Val VAR_001689
23 COL1A1 p.Gly839Ser VAR_001692
24 COL1A1 p.Gly842Arg VAR_001693
25 COL1A1 p.Gly845Arg VAR_001694
26 COL1A1 p.Gly851Asp VAR_001695
27 COL1A1 p.Gly869Cys VAR_001696
28 COL1A1 p.Gly884Ser VAR_001697
29 COL1A1 p.Gly896Cys VAR_001698
30 COL1A1 p.Gly926Cys VAR_001699
31 COL1A1 p.Gly980Val VAR_001700
32 COL1A1 p.Gly1022Val VAR_001703
33 COL1A1 p.Gly1025Arg VAR_001704
34 COL1A1 p.Gly1040Ser VAR_001705
35 COL1A1 p.Gly1043Ser VAR_001706
36 COL1A1 p.Gly1061Asp VAR_001710
37 COL1A1 p.Gly1079Ser VAR_001714
38 COL1A1 p.Gly1082Cys VAR_001715
39 COL1A1 p.Gly1088Ala VAR_001716
40 COL1A1 p.Gly1091Ser VAR_001717
41 COL1A1 p.Gly1100Asp VAR_001718
42 COL1A1 p.Gly1106Ala VAR_001719
43 COL1A1 p.Gly1124Cys VAR_001720
44 COL1A1 p.Gly1142Ser VAR_001721
45 COL1A1 p.Gly1151Val VAR_001723
46 COL1A1 p.Gly1154Arg VAR_001724
47 COL1A1 p.Gly1166Cys VAR_001725
48 COL1A1 p.Gly1172Asp VAR_001726
49 COL1A1 p.Gly1181Ser VAR_001727
50 COL1A1 p.Gly1184Val VAR_001728

ClinVar genetic disease variations for Osteogenesis Imperfecta, Type Ii:

6 (show top 50) (show all 60)
id Gene Variation Type Significance SNP ID Assembly Location
1 COL1A2 NC_000007.14: g.94418886_94423301del4416 deletion Pathogenic rs74315138 GRCh37 Chromosome 7, 94048198: 94052613
2 COL1A2 NM_000089.3(COL1A2): c.2720G> A (p.Gly907Asp) single nucleotide variant Pathogenic rs121912900 GRCh37 Chromosome 7, 94054475: 94054475
3 COL1A2 COL1A2, EX33DEL deletion Pathogenic
4 COL1A2 NM_000089.3(COL1A2): c.1640G> A (p.Gly547Asp) single nucleotide variant Pathogenic rs121912901 GRCh37 Chromosome 7, 94043234: 94043234
5 COL1A2 NM_000089.3(COL1A2): c.2593G> A (p.Gly865Ser) single nucleotide variant Pathogenic rs121912902 GRCh37 Chromosome 7, 94053675: 94053675
6 COL1A2 COL1A2, GLY976ASP undetermined variant Pathogenic
7 COL1A2 NM_000089.3(COL1A2): c.2414G> A (p.Gly805Asp) single nucleotide variant Pathogenic rs121912904 GRCh37 Chromosome 7, 94052279: 94052279
8 COL1A2 COL1A2, EX28DEL deletion Pathogenic
9 COL1A2 NM_000089.3(COL1A2): c.1414G> T (p.Gly472Cys) single nucleotide variant Pathogenic rs121912906 GRCh37 Chromosome 7, 94041905: 94041905
10 COL1A2 COL1A2, IVS33DS, G-A, +5 single nucleotide variant Pathogenic
11 COL1A2 NM_000089.3(COL1A2): c.2080G> C (p.Gly694Arg) single nucleotide variant Pathogenic rs121912908 GRCh37 Chromosome 7, 94049545: 94049545
12 COL1A2 NM_000089.3(COL1A2): c.1739G> A (p.Gly580Asp) single nucleotide variant Pathogenic rs121912909 GRCh37 Chromosome 7, 94044557: 94044557
13 COL1A2 NM_000089.3(COL1A2): c.1504G> A (p.Gly502Ser) single nucleotide variant Pathogenic rs121912910 GRCh37 Chromosome 7, 94042395: 94042395
14 COL1A2 NM_000089.3(COL1A2): c.1262G> A (p.Gly421Asp) single nucleotide variant Pathogenic rs267606741 GRCh37 Chromosome 7, 94040378: 94040378
15 COL1A1 NM_000088.3(COL1A1): c.824G> A (p.Gly275Asp) single nucleotide variant Pathogenic rs72645333 GRCh37 Chromosome 17, 48274012: 48274012
16 COL1A1 NM_000088.3(COL1A1): c.1705G> C (p.Gly569Arg) single nucleotide variant Pathogenic rs72648363 GRCh37 Chromosome 17, 48271366: 48271366
17 COL1A1 NM_000088.3(COL1A1): c.2210G> A (p.Gly737Asp) single nucleotide variant Pathogenic rs72651651 GRCh37 Chromosome 17, 48268769: 48268769
18 COL1A1 NM_000088.3(COL1A1): c.2552G> A (p.Gly851Asp) single nucleotide variant Pathogenic rs72653137 GRCh37 Chromosome 17, 48267369: 48267369
19 COL1A1 NM_000088.3(COL1A1): c.2533G> A (p.Gly845Arg) single nucleotide variant Pathogenic rs72653136 GRCh37 Chromosome 17, 48267388: 48267388
20 COL1A1 NM_000088.3(COL1A1): c.2605G> T (p.Gly869Cys) single nucleotide variant Pathogenic rs72653143 GRCh37 Chromosome 17, 48267228: 48267228
21 COL1A1 NM_000088.3(COL1A1): c.2686G> T (p.Gly896Cys) single nucleotide variant Pathogenic rs72653152 GRCh37 Chromosome 17, 48266881: 48266881
22 COL1A1 NM_000088.3(COL1A1): c.2776G> T (p.Gly926Cys) single nucleotide variant Pathogenic rs72653154 GRCh37 Chromosome 17, 48266791: 48266791
23 COL1A1 NM_000088.3(COL1A1): c.3073G> A (p.Gly1025Arg) single nucleotide variant Pathogenic rs72653172 GRCh37 Chromosome 17, 48266129: 48266129
24 COL1A1 NM_000088.3(COL1A1): c.3182G> A (p.Gly1061Asp) single nucleotide variant Pathogenic rs72654797 GRCh37 Chromosome 17, 48265916: 48265916
25 COL1A1 NM_000088.3(COL1A1): c.3244G> T (p.Gly1082Cys) single nucleotide variant Pathogenic rs72656303 GRCh37 Chromosome 17, 48265474: 48265474
26 COL1A1 NM_000088.3(COL1A1): c.3271G> A (p.Gly1091Ser) single nucleotide variant Pathogenic rs72656306 GRCh37 Chromosome 17, 48265335: 48265335
27 COL1A1 NM_000088.3(COL1A1): c.3496G> T (p.Gly1166Cys) single nucleotide variant Pathogenic rs72656324 GRCh37 Chromosome 17, 48264411: 48264411
28 COL1A1 NM_000088.3(COL1A1): c.3559G> A (p.Gly1187Ser) single nucleotide variant Pathogenic rs72656332 GRCh37 Chromosome 17, 48264256: 48264256
29 COL1A1 COL1A1, 9-BP DEL deletion Pathogenic
30 COL1A1 COL1A1, 1-BP INS, 4088T insertion Pathogenic
31 COL1A1 NM_000088.3(COL1A1): c.2156G> A (p.Gly719Asp) single nucleotide variant Pathogenic rs72651646 GRCh37 Chromosome 17, 48268823: 48268823
32 COL1A1 NM_000088.3(COL1A1): c.3541G> A (p.Gly1181Ser) single nucleotide variant Pathogenic rs72656330 GRCh37 Chromosome 17, 48264274: 48264274
33 COL1A1 NM_000088.3(COL1A1): c.2444G> T (p.Gly815Val) single nucleotide variant Pathogenic rs66929517 GRCh37 Chromosome 17, 48267695: 48267695
34 COL1A1 NM_000088.3(COL1A1): c.3452G> T (p.Gly1151Val) single nucleotide variant Pathogenic rs72656321 GRCh37 Chromosome 17, 48264455: 48264455
35 COL1A1 NM_000088.3(COL1A1): c.1301G> T (p.Gly434Val) single nucleotide variant Pathogenic rs72648333 GRCh37 Chromosome 17, 48272460: 48272460
36 COL1A1 COL1A1, IVS14DS, G-A, +5 single nucleotide variant Pathogenic
37 COL1A1 NM_000088.3(COL1A1): c.2939G> T (p.Gly980Val) single nucleotide variant Pathogenic rs72653166 GRCh37 Chromosome 17, 48266370: 48266370
38 COL1A1 COL1A1, EX15-16DUP duplication Pathogenic
39 COL1A1 NM_000088.3(COL1A1): c.1777G> A (p.Gly593Ser) single nucleotide variant Pathogenic rs66527965 GRCh37 Chromosome 17, 48270399: 48270399
40 COL1A1 NM_000088.3(COL1A1): c.2228G> T (p.Gly743Val) single nucleotide variant Pathogenic rs72651653 GRCh37 Chromosome 17, 48268751: 48268751
41 COL1A1 NM_000088.3(COL1A1): c.1598G> A (p.Gly533Asp) single nucleotide variant Pathogenic rs72648356 GRCh37 Chromosome 17, 48271726: 48271726
42 COL1A1 NM_000088.3(COL1A1): c.2291G> T (p.Gly764Val) single nucleotide variant Pathogenic rs72651657 GRCh37 Chromosome 17, 48268230: 48268230
43 COL1A1 COL1A1, 9-BP DUP duplication Pathogenic
44 COL1A1 NM_000088.3(COL1A1): c.4247delC (p.Thr1416Argfs) deletion Pathogenic rs398122835 GRCh37 Chromosome 17, 48263140: 48263140
45 COL1A1 NM_000088.3(COL1A1): c.4160C> T (p.Ala1387Val) single nucleotide variant Pathogenic rs397514672 GRCh37 Chromosome 17, 48263227: 48263227
46 COL1A1 NM_000088.3(COL1A1): c.91C> T (p.Gln31Ter) single nucleotide variant Pathogenic rs794726873 GRCh37 Chromosome 17, 48278784: 48278784
47 COL1A1 NM_000088.3(COL1A1): c.959G> A (p.Gly320Asp) single nucleotide variant Likely pathogenic rs72645353 GRCh37 Chromosome 17, 48273559: 48273559
48 COL1A1 NM_000088.3(COL1A1): c.1767+2T> G single nucleotide variant Pathogenic rs794727394 GRCh37 Chromosome 17, 48271302: 48271302
49 COL1A2 NM_000089.3(COL1A2): c.2957C> T (p.Pro986Leu) single nucleotide variant Likely pathogenic rs768171831 GRCh37 Chromosome 7, 94055323: 94055323
50 COL1A2 NM_000089.3(COL1A2): c.3034G> A (p.Gly1012Ser) single nucleotide variant Likely pathogenic rs72659319 GRCh38 Chromosome 7, 94426459: 94426459

Expression for Osteogenesis Imperfecta, Type Ii

Search GEO for disease gene expression data for Osteogenesis Imperfecta, Type Ii.

Pathways for Osteogenesis Imperfecta, Type Ii

Pathways related to Osteogenesis Imperfecta, Type Ii according to GeneCards Suite gene sharing:

(show all 11)
id Super pathways Score Top Affiliating Genes
1
Show member pathways
12.38 COL1A1 COL1A2 CRTAP P3H1 PPIB
2
Show member pathways
12.01 COL1A1 COL1A2 CRTAP P3H1 PPIB
3
Show member pathways
11.76 CD36 COL1A1 COL1A2
4
Show member pathways
11.51 CD36 COL1A1 COL1A2
5 11.14 ALPL FGFR3 SOX9
6 11.1 COL1A1 COL1A2
7 11.07 COL1A1 COL1A2
8 10.98 COL1A1 COL1A2
9 10.79 COL1A1 COL1A2
10 10.62 ALPL FGFR3
11 10.51 CD36 COL1A1 COL1A2

GO Terms for Osteogenesis Imperfecta, Type Ii

Cellular components related to Osteogenesis Imperfecta, Type Ii according to GeneCards Suite gene sharing:

id Name GO ID Score Top Affiliating Genes
1 endoplasmic reticulum GO:0005783 9.87 COL1A1 COL1A2 CRTAP CYP21A2 FGFR3 P3H1
2 proteinaceous extracellular matrix GO:0005578 9.65 ALPL COL1A1 COL1A2 CRTAP P3H1
3 collagen trimer GO:0005581 9.54 CD36 COL1A1 COL1A2
4 endoplasmic reticulum lumen GO:0005788 9.35 COL1A1 COL1A2 CRTAP P3H1 PPIB
5 collagen type I trimer GO:0005584 9.16 COL1A1 COL1A2
6 macromolecular complex GO:0032991 8.8 CRTAP P3H1 PPIB

Biological processes related to Osteogenesis Imperfecta, Type Ii according to GeneCards Suite gene sharing:

(show all 15)
id Name GO ID Score Top Affiliating Genes
1 extracellular matrix organization GO:0030198 9.69 COL1A1 COL1A2 SOX9
2 blood coagulation GO:0007596 9.65 CD36 COL1A1 COL1A2
3 protein stabilization GO:0050821 9.63 CRTAP P3H1 PPIB
4 chondrocyte differentiation GO:0002062 9.55 FGFR3 SOX9
5 collagen fibril organization GO:0030199 9.54 COL1A1 COL1A2
6 positive regulation of multicellular organism growth GO:0040018 9.52 CHD7 PPIB
7 blood vessel development GO:0001568 9.5 CHD7 COL1A1 COL1A2
8 protein localization to nucleus GO:0034504 9.49 COL1A1 SOX9
9 protein heterotrimerization GO:0070208 9.43 COL1A1 COL1A2
10 chaperone-mediated protein folding GO:0061077 9.43 CRTAP P3H1 PPIB
11 lung epithelial cell differentiation GO:0060487 9.4 NUMA1 SOX9
12 skin morphogenesis GO:0043589 9.37 COL1A1 COL1A2
13 negative regulation of post-translational protein modification GO:1901874 9.16 CRTAP P3H1
14 endochondral ossification GO:0001958 9.13 ALPL COL1A1 FGFR3
15 skeletal system development GO:0001501 9.1 ALPL CHD7 COL1A1 COL1A2 FGFR3 SOX9

Molecular functions related to Osteogenesis Imperfecta, Type Ii according to GeneCards Suite gene sharing:

id Name GO ID Score Top Affiliating Genes
1 platelet-derived growth factor binding GO:0048407 8.62 COL1A1 COL1A2

Sources for Osteogenesis Imperfecta, Type Ii

3 CDC
7 CNVD
9 Cosmic
10 dbSNP
11 DGIdb
16 ExPASy
18 FMA
28 GO
29 GTR
30 HGMD
31 HMDB
32 HPO
33 ICD10
34 ICD10 via Orphanet
35 ICD9CM
36 IUPHAR
37 KEGG
38 LifeMap
40 MedGen
42 MeSH
43 MESH via Orphanet
44 MGI
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48 NDF-RT
51 NINDS
52 Novoseek
54 OMIM
55 OMIM via Orphanet
59 PubMed
60 QIAGEN
65 SNOMED-CT via Orphanet
67 TGDB
68 Tocris
69 UMLS
70 UMLS via Orphanet
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