Sources: 12Gene Ontology See all sources |
Cellular components related to papilloma according to GeneDecks: (show all 11)
| id | Name | GO ID | Score | Top Affiliating Genes | | 1 | nuclear chromatin | GO:000790 | 10.2 | POU4F1, RXRA, TP53, AR, UBE2B, MUC1 | | 2 | axon | GO:030424 | 9.4 | TGFB1, NF1, RXRA, SRCIN1, AR, PAK1 | | 3 | extracellular space | GO:005615 | 8.7 | IFNB1, IFNG, CTSB, EGF, EGFR, TTR | | 4 | nucleoplasm | GO:005654 | 7.8 | PIN1, PCNA, RB1, BRCA2, RARA, RARB | | 5 | plasma membrane | GO:005886 | 6.1 | EGFR, EGF, KRT1, PKM, RPS27A, PTEN | | 6 | nucleus | GO:005634 | 4.7 | PTEN, PTGS2, PTGES2, CYCS, SP8, PPARD | | 7 | cytosol | GO:005829 | INF | DMD, CYCS, ODC1, RPS27, RPS27A, PTGES2 | | 8 | keratin filament | GO:045095 | INF | KRT14, KRTAP11-1, KRT10, KRT1, , KRT7 | | 9 | cytoplasm | GO:005737 | INF | ACTC1, SLC23A1, PGR, RLBP1, SIPA1L1, POU2F2 | | 10 | intermediate filament | GO:005882 | INF | GFAP, KRT14, KRT20, KRT10, KRT1, | | 11 | protein complex | GO:043234 | INF | TP53, PTGS2, DMD, TOP2A, , CAV1 |
Biological processes related to papilloma according to GeneDecks: (show top 50)
(show all 79)
| id | Name | GO ID | Score | Top Affiliating Genes | | 1 | DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest | GO:006977 | 10.8 | PSMB8, RPS27A, TP53, CASP2, CDKN1B, CDKN1A | | 2 | cell cycle checkpoint | GO:000075 | 10.7 | PSMB8, RPS27A, TP53, CCNE2, CDKN2A, CDKN1B | | 3 | G1 phase of mitotic cell cycle | GO:000080 | 10.6 | RPS27A, CCND1, CDKN2A, CDKN1B, CDKN2B, CDKN1A | | 4 | mitotic cell cycle | GO:000278 | 10.5 | CCNE2, CCND1, RPS27, RPS27A, TOP2A, PSMB8 | | 5 | G1/S transition of mitotic cell cycle | GO:000082 | 10.5 | CDKN2A, CCNE2, CCND1, RPS27A, PSMB8, CDKN1B | | 6 | negative regulation of cyclin-dependent protein kinase activity | GO:045736 | 10.5 | CASP3, MEN1, CDKN2A, CDKN1B, CDKN1A | | 7 | neuron apoptotic process | GO:051402 | 10.4 | TP63, TP53, CASP3, BAX, BCL2, RB1 | | 8 | response to gamma radiation | GO:010332 | 10.4 | TP53, CAV1, MEN1, BAX, BAK1, BCL2 | | 9 | activation of pro-apoptotic gene products | GO:008633 | 10.4 | CASP8, IFI27, FADD, BAX, BAK1, BCL2 | | 10 | cell cycle arrest | GO:007050 | 10.4 | TGFB1, TP53, IFNG, MEN1, CDKN2A, CDKN1B | | 11 | induction of apoptosis by intracellular signals | GO:008629 | 10.3 | CYCS, TP53, CASP8, CASP3, CDKN1A, BAX | | 12 | negative regulation of epithelial cell proliferation | GO:050680 | 10.3 | TGFB1, KRT4, PPARD, PTEN, AR, CDKN2B | | 13 | cell proliferation | GO:008283 | 10.3 | PTEN, PPARD, RPS27, EGFR, TYR, TGFA | | 14 | type I interferon-mediated signaling pathway | GO:060337 | 10.3 | PSMB8, STAT1, STAT2, TYK2, HLA-G, HLA-B | | 15 | mammary gland alveolus development | GO:060749 | 10.2 | TGFA, EGF, CCND1, AR, CHUK | | 16 | positive regulation of peptidyl-serine phosphorylation | GO:033138 | 10.2 | TGFB1, CAV1, CD44, BCL2, PAK1, VEGFA | | 17 | positive regulation of peptidyl-tyrosine phosphorylation | GO:050731 | 10.2 | TP53, IGF2, CD44, CD4, CD36, PAK2 | | 18 | antigen processing and presentation of exogenous peptide antigen via MHC class I | GO:042590 | 10.2 | PSMB8, UBC, CD36, CD207, HLA-B, HLA-G | | 19 | regulation of apoptotic process | GO:042981 | 10.1 | PSMB8, STAT1, RPS27A, CTSB, DAPK1, TP53 | | 20 | negative regulation of transcription, DNA-dependent | GO:045892 | 10.1 | IFNA2, HMGA1, TP53, TP63, PPARD, NR1H2 | | 21 | response to ethanol | GO:045471 | 10.1 | BAK1, CCND1, CASP8, CTSB, RXRA, ACTC1 | | 22 | negative regulation of apoptotic process | GO:043066 | 10.1 | CD44, AR, CCNG1, CASP3, TP53, PTEN | | 23 | release of cytochrome c from mitochondria | GO:001836 | 10.0 | TP53, CASP3, JUN, BAX, BAK1, BCL2 | | 24 | positive regulation of apoptotic process | GO:043065 | 10.0 | TP53, PTGS2, RXRA, NF1, TOP2A, POU4F1 | | 25 | MAPK cascade | GO:000165 | 10.0 | TGFB1, TGFA, EGFR, NF1, CAV1, MEN1 | | 26 | response to DNA damage stimulus | GO:006974 | 9.9 | MEN1, CCND1, CASP3, TP53, TOP2A, CDKN1A | | 27 | induction of apoptosis by extracellular signals | GO:008624 | 9.9 | CASP2, CASP8, CAV1, DAPK1, RPS27A, CASP3 | | 28 | epidermal growth factor receptor signaling pathway | GO:007173 | 9.9 | EGFR, TGFA, TGFB1, PXN, PRKCE, EGF | | 29 | transforming growth factor beta receptor signaling pathway | GO:007179 | 9.8 | TGFB1, RPS27A, TP53, MEN1, FOS, CDKN2B | | 30 | antigen processing and presentation of peptide antigen via MHC class I | GO:002474 | 9.8 | PSMB8, RPS27A, CTSS, HLA-G, HLA-B, CD207 | | 31 | cytokine-mediated signaling pathway | GO:019221 | 9.7 | RPS27A, TYK2, STAT2, STAT3, STAT1, PSMB8 | | 32 | negative regulation of protein phosphorylation | GO:001933 | 9.7 | TGFB1, PTEN, IGFBP3, IL2, MEN1, PARK2 | | 33 | positive regulation of cell proliferation | GO:008284 | 9.7 | PTEN, ODC1, PPARD, EGF, EGFR, TGFB1 | | 34 | response to virus | GO:009615 | 9.7 | STAT1, STAT2, ODC1, HMGA1, IFNG, IFNB1 | | 35 | DNA repair | GO:006281 | 9.6 | FOXM1, MEN1, RPS27A, TOP2A, TFPT, XRCC5 | | 36 | negative regulation of cell proliferation | GO:008285 | 9.6 | IGFBP3, IFNB1, HMGA1, TP53, PTEN, PTGS2 | | 37 | positive regulation of I-kappaB kinase/NF-kappaB cascade | GO:043123 | 9.6 | RPS27A, CASP8, FADD, CD36, S100B, UBC | | 38 | transcription initiation from RNA polymerase II promoter | GO:006367 | 9.6 | PPARD, NR1H2, NR2C1, RXRA, RPS27A, PGR | | 39 | response to organic cyclic compound | GO:014070 | 9.5 | STAT3, RXRA, CTSB, PTGS2, CCND1, CDKN1A | | 40 | innate immune response | GO:045087 | 9.5 | FADD, IFNA2, IFNB1, CASP8, CTSS, CTSB | | 41 | positive regulation of transcription, DNA-dependent | GO:045893 | 9.5 | TP53, TP63, PTGES2, PPARD, EGF, TGFB1 | | 42 | induction of apoptosis | GO:006917 | 9.4 | PTEN, DAPK1, TGFB1, TFPT, STAT1, PRKCE | | 43 | apoptotic process | GO:006915 | 9.4 | CYCS, DAPK1, PTEN, TP63, TP53, PPARD | | 44 | nerve growth factor receptor signaling pathway | GO:048011 | 9.4 | PRKCE, STAT3, RPS27A, PTEN, CASP2, CASP3 | | 45 | virus-host interaction | GO:019048 | 9.3 | TP53, SMARCB1, RXRA, KRT7, TGFB1, STAT2 | | 46 | negative regulation of transcription from RNA polymerase II promoter | GO:000122 | 9.3 | TP53, PPARD, NR2C1, RXRA, RPS27A, TGFB1 | | 47 | response to drug | GO:042493 | 9.2 | PTGS2, ACTC1, TOP2A, TGFA, TGFB1, STAT3 | | 48 | protein phosphorylation | GO:006468 | 9.2 | ERBB2, DAPK1, EIF2AK4, TYK2, TGFB1, PRKCE | | 49 | positive regulation of transcription from RNA polymerase II promoter | GO:045944 | 8.4 | RB1, IFNG, ESR1, TP53, TP63, NR1H2 | | 50 | cellular response to organic substance | GO:071310 | INF | , TIMP2, CASP3, BAX, BCL2 |
Molecular functions related to papilloma according to GeneDecks: (show all 18)
| id | Name | GO ID | Score | Top Affiliating Genes | | 1 | structural molecule activity | GO:005198 | 10.7 | CSTA, KRTAP11-1, KRT10, KRT7, KRT13, KRT4 | | 2 | cyclin-dependent protein kinase inhibitor activity | GO:004861 | 10.6 | CASP3, CDKN2A, CDKN1B, CDKN2B, CDKN1A | | 3 | retinoic acid receptor activity | GO:003708 | 10.4 | RARA, RARB, RXRA | | 4 | transcription factor binding | GO:008134 | 10.0 | AR, HMGA1, TP53, STAT3, CDKN2A, JUN | | 5 | ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity | GO:004879 | 9.9 | STAT3, RXRA, NR1H2, PPARD, AR | | 6 | transcription regulatory region DNA binding | GO:044212 | 9.8 | STAT3, RXRA, TP63, TP53, MEN1, AR | | 7 | sequence-specific DNA binding | GO:043565 | 9.8 | NR1H2, NR2C1, RXRA, TOP2A, STAT3, POU2F2 | | 8 | steroid hormone receptor activity | GO:003707 | 9.8 | PGR, RXRA, NR2C1, NR1H2, PPARD, ESR1 | | 9 | protein heterodimerization activity | GO:046982 | 9.7 | TP53, RXRA, EGFR, TYR, TOP2A, TGFB1 | | 10 | protein kinase binding | GO:019901 | 9.6 | CCND1, TP53, PTEN, SRCIN1, STAT3, PRKCE | | 11 | cytokine activity | GO:005125 | 9.2 | CSF2, IFNG, IFNB1, IFNA2, IL27, IL2 | | 12 | protein homodimerization activity | GO:042803 | 9.1 | PTGS2, NR2C1, SHBG, EIF2AK4, TYR, TOP2A | | 13 | sequence-specific DNA binding transcription factor activity | GO:003700 | 8.8 | TP53, PPARD, NR2C1, RXRA, TADA3, STAT2 | | 14 | enzyme binding | GO:019899 | 7.9 | CASP2, CAV1, ESR1, HMGA1, TP53, PTEN | | 15 | identical protein binding | GO:042802 | INF | S100B, FADD, CASP8, ESR1, ERBB2, TP53 | | 16 | structural constituent of cytoskeleton | GO:005200 | INF | GFAP, KRT14, KRT20, KRT1, , PLS1 | | 17 | calcium ion binding | GO:005509 | INF | EGF, DSG3, TCHH, , STAT2, STAT3 | | 18 | protein binding | GO:005515 | INF | ESR1, NF1, KRT7, , KRT1, KRT20 |
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