Sources: 12Gene Ontology See all sources |
Cellular components related to periodontal disease according to GeneDecks: (show all 12)
| id | Name | GO ID | Score | Top Affiliating Genes | | 1 | lysosome | GO:005764 | 10.1 | RRAGA, CPQ, AGA, CTSL1, CTSC, CTSB | | 2 | membrane raft | GO:045121 | 10.1 | ADAM17, DPP4, TLR4, TNF, ITGB1, CD4 | | 3 | proteinaceous extracellular matrix | GO:005578 | 10.0 | FN1, AMELX, AMELY, TNFRSF11B, SPARC, ELN | | 4 | secretory granule | GO:030141 | 9.8 | LTF, ACPP, ELANE, TF, PLAT, CTSG | | 5 | external side of plasma membrane | GO:009897 | 9.2 | CXCR3, ITGB1, CD44, CD40LG, CD4, CD86 | | 6 | integral to plasma membrane | GO:005887 | 9.2 | TLR2, AGER, HBEGF, NOTCH2, CTLA4, PTGER2 | | 7 | Golgi lumen | GO:005796 | 9.0 | PROS1, DCN, DEFB4A, DEFB1, DEFA3, TGFB1 | | 8 | cell surface | GO:009986 | 8.9 | ADAM17, PROM1, DPP4, TGFB1, THBD, TIMP2 | | 9 | platelet alpha granule lumen | GO:031093 | 8.5 | HGF, PROS1, TGFB1, TIMP1, EGF, SPARC | | 10 | extracellular region | GO:005576 | 7.2 | NOTCH2, IBSP, IFNG, CCL5, CCL3, CCL17 | | 11 | plasma membrane | GO:005886 | 6.9 | PTGER2, PTGS1, CTLA4, CTSG, NOD2, NOS3 | | 12 | extracellular space | GO:005615 | 5.1 | SOD1, CRP, CTSG, CTSB, CTSH, SPARC |
Biological processes related to periodontal disease according to GeneDecks: (show top 50)
(show all 77)
| id | Name | GO ID | Score | Top Affiliating Genes | | 1 | extracellular matrix organization | GO:030198 | 11.4 | MMP1, MMP14, MMP2, TIMP2, TIMP1, ELN | | 2 | extracellular matrix disassembly | GO:022617 | 11.4 | MMP9, MMP8, MMP1, MMP13, MMP14, MMP2 | | 3 | collagen catabolic process | GO:030574 | 11.1 | MMP3, MMP1, MMP13, MMP2, MMP26, MMP7 | | 4 | positive regulation of interleukin-6 production | GO:032755 | 11.1 | CD36, HSPD1, TNF, IL6, NOD2, TLR2 | | 5 | defense response to Gram-positive bacterium | GO:050830 | 11.0 | TLR2, CAMP, IL6, IL12A, FGR, MMP7 | | 6 | positive regulation of chemokine production | GO:032722 | 10.9 | IL6, IL18, LBP, TLR4, TLR2, TNF | | 7 | positive regulation of interferon-gamma production | GO:032729 | 10.8 | CD40LG, IL12A, IL12B, IL12RB2, IL18, IL1B | | 8 | biomineral tissue development | GO:031214 | 10.8 | AMELX, IBSP, SPP1, HTN3, DSPP, STATH | | 9 | proteolysis | GO:006508 | 10.7 | PROS1, ELANE, DPP4, MMP7, HGF, MMP3 | | 10 | innate immune response | GO:045087 | 10.7 | NLRP3, IL1R1, FGR, CD4, CD14, LBP | | 11 | defense response to Gram-negative bacterium | GO:050829 | 10.7 | LBP, CD4, MMP7, IL12B, CAMP, TLR4 | | 12 | chemotaxis | GO:006935 | 10.7 | CXCL6, CXCL16, CXCL12, CXCL10, CX3CR1, DEFB4A | | 13 | monocyte chemotaxis | GO:002548 | 10.6 | CCL2, IL6, CALCA, CCL5, TNFRSF11A, TNFSF11 | | 14 | positive regulation of ERK1 and ERK2 cascade | GO:070374 | 10.6 | F2RL1, CCL3, IL1B, IL1A, FGF10, CD44 | | 15 | response to lipopolysaccharide | GO:032496 | 10.6 | ADAM17, CXCL10, DCN, THBD, FGF10, IL12A | | 16 | positive regulation of tumor necrosis factor production | GO:032760 | 10.5 | TLR2, CD36, CD14, IL12B, IL18, CCL3 | | 17 | defense response to bacterium | GO:042742 | 10.5 | CXCL13, CCL20, DEFB1, LYZ, LTF, DEFB4A | | 18 | negative regulation of growth of symbiont in host | GO:044130 | 10.5 | TLR2, ELANE, CTSG, TNF, IFNG, CD36 | | 19 | acute-phase response | GO:006953 | 10.3 | SERPINF2, CRP, IL6, IL1RN, INS, FN1 | | 20 | response to glucocorticoid stimulus | GO:051384 | 10.2 | BGLAP, IL10, IL1B, IL1RN, PTGS2, TNF | | 21 | chemokine-mediated signaling pathway | GO:070098 | 10.2 | CCL5, PTK2B, CX3CR1, CCR5, CCL2, CCR6 | | 22 | cell-cell signaling | GO:007267 | 10.2 | CXCL10, TNFRSF11A, CXCL6, CXCL13, TNFSF10, IL11 | | 23 | cellular response to interleukin-1 | GO:071347 | 10.1 | IL17A, MMP9, IL8, PYCARD, ICAM1, CCL5 | | 24 | positive regulation of interleukin-12 production | GO:032735 | 10.1 | CD36, IL12B, IFNG, HSPD1, TLR4, TLR2 | | 25 | humoral immune response | GO:006959 | 10.0 | PAX5, IL6, CCR6, IFNG, TNF, NOTCH2 | | 26 | lipopolysaccharide-mediated signaling pathway | GO:031663 | 9.9 | CCL5, TLR2, TNF, TLR4, TGFB1, LBP | | 27 | positive regulation of smooth muscle cell proliferation | GO:048661 | 9.9 | NOTCH3, TNF, PTGS2, ELANE, HBEGF, IL6 | | 28 | positive regulation of peptidyl-tyrosine phosphorylation | GO:050731 | 9.8 | OSM, PTK2B, TLR4, IL11, HGF, CD4 | | 29 | signal transduction | GO:007165 | 9.8 | TLR2, HBEGF, PECAM1, CXCL12, CXCL13, CXCL6 | | 30 | positive regulation of cytokine secretion | GO:050715 | 9.8 | CD14, INS, FGR, IL10, IL1A, TLR2 | | 31 | cellular response to organic cyclic compound | GO:071407 | 9.8 | IL18, CCL2, CCL3, CCL5, ALPL, TNF | | 32 | cell surface receptor signaling pathway | GO:007166 | 9.7 | CCR5, IL1R1, CXCL10, AGER, PTK2B, IFNGR2 | | 33 | response to heat | GO:009408 | 9.7 | NOS3, CALCA, CCL2, IL1B, CD14, OSM | | 34 | response to vitamin D | GO:033280 | 9.6 | SPP1, TGFB1, CXCL10, PTGS2, ALPL, IL1B | | 35 | response to ethanol | GO:045471 | 9.6 | CCL2, SOD1, MMP9, TLR4, NOS3, CTSB | | 36 | cellular response to lipopolysaccharide | GO:071222 | 9.5 | CCR5, PYCARD, IFNG, TLR4, CX3CR1, CCL2 | | 37 | immune response | GO:006955 | 9.5 | TLR2, CTSG, CTSC, CTLA4, TNFSF13B, TNFSF11 | | 38 | positive regulation of nitric oxide biosynthetic process | GO:045429 | 9.5 | HBB, TLR2, TLR4, PTGS2, TNF, HSP90AA1 | | 39 | MAPK cascade | GO:000165 | 9.4 | CCL2, MAPK1, IL18, IL1B, CCR5, CCL3 | | 40 | positive regulation of NF-kappaB transcription factor activity | GO:051092 | 9.4 | IL1B, IL6, IRAK3, TGFB1, INS, ICAM1 | | 41 | positive regulation of cell migration | GO:030335 | 9.3 | F2RL1, CTSH, PTK2B, CCL3, FGR, INS | | 42 | response to hypoxia | GO:001666 | 9.3 | ADAM17, CXCL12, DPP4, PLAT, NOS3, TGFB1 | | 43 | inflammatory response | GO:006954 | 9.3 | NLRP3, CCL22, IL8, IL6, IL1B, IL1A | | 44 | negative regulation of apoptotic process | GO:043066 | 9.2 | TIMP1, HSPA5, HSPD1, CAT, TNF, PTK2B | | 45 | anti-apoptosis | GO:006916 | 9.1 | HGF, ADAM17, SERPINB2, MPO, CD40LG, IL10 | | 46 | positive regulation of cell proliferation | GO:008284 | 8.3 | ADAM17, CTSH, PTK2B, CXCL10, CSF3, TNFSF13B | | 47 | platelet degranulation | GO:002576 | 7.9 | SOD1, PECAM1, HGF, PROS1, TF, TGFB1 | | 48 | platelet activation | GO:030168 | 7.9 | HGF, HSPA5, SPARC, EGF, TIMP1, TGFB1 | | 49 | blood coagulation | GO:007596 | 7.8 | MMRN1, SERPINF2, SERPINB2, BSG, PECAM1, SPARC | | 50 | response to drug | GO:042493 | 7.4 | IFNG, ICAM1, TNF, TNFRSF11B, PTGS2, CCL5 |
Molecular functions related to periodontal disease according to GeneDecks: (show all 13)
| id | Name | GO ID | Score | Top Affiliating Genes | | 1 | metalloendopeptidase activity | GO:004222 | 10.9 | ADAM17, MMP9, MMP8, MMP7, MMP3, MMP26 | | 2 | Gram-positive bacterial cell surface binding | GO:051637 | 10.5 | LBP, CD36, CRP, TLR2 | | 3 | chemokine activity | GO:008009 | 10.5 | CXCL10, CXCL12, CXCL13, CXCL16, CXCL6, CCL5 | | 4 | collagen binding | GO:005518 | 10.5 | DCN, DPP4, DSPP, SPARC, FN1, MMP9 | | 5 | lipopolysaccharide binding | GO:001530 | 10.2 | TLR4, HSPD1, CD14, LBP, BPI | | 6 | heparin binding | GO:008201 | 10.2 | LTF, ELANE, HBEGF, CXCL13, CXCL6, CTSG | | 7 | serine-type endopeptidase activity | GO:004252 | 10.1 | HGF, DPP4, ELANE, KLK3, KLK11, LTF | | 8 | protease binding | GO:002020 | 10.0 | CSTA, DPP4, ELANE, TNF, IL1R1, INS | | 9 | receptor activity | GO:004872 | 10.0 | TNFRSF11B, NOTCH2, AGER, TLR2, TLR4, THBD | | 10 | transmembrane signaling receptor activity | GO:004888 | 9.5 | TNFRSF11A, AGER, TLR2, TLR4, THBD, TNFRSF10D | | 11 | cytokine activity | GO:005125 | 9.2 | CSF3, IL4, IL6, IFNG, TNF, TNFRSF11B | | 12 | growth factor activity | GO:008083 | 7.9 | AMELX, EGF, HBEGF, TGFB1, OSM, CXCL12 | | 13 | protein binding | GO:005515 | 4.5 | CRP, PLAT, NOD2, NOS3, NOTCH2, NOTCH3 |
|