Summaries for Renal Oncocytoma

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44Wikipedia, 22MalaCards
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Wikipedia: A renal oncocytoma is a tumour of the kidney made up of oncocytes, a special kind of cell.44 more...

MalaCards: Renal Oncocytoma, also known as renal epithelial oncocytic tumor, is related to oxyphilic adenoma and renal cell carcinoma. An important gene associated with Renal Oncocytoma is CLDN8 (claudin 8), and among its related pathways are Cytoskeleton remodeling Keratin filaments and Cytoskeleton remodeling_Keratin filaments. The compounds eosin and monochloroacetic acid have been mentioned in the context of this disorder. Affiliated tissues include kidney, and related mouse phenotypes are liver/biliary system and hematopoietic system.

Aliases & Descriptions for Renal Oncocytoma

Sources:
6Disease Ontology, 30NIH Rare Diseases, 8DISEASES, 43UMLS, 27NCIt, 24MeSH, 40SNOMED-CT, 33OMIM
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Aliases & Descriptions:

renal oncocytoma 6 30 8
renal epithelial oncocytic tumor 6
oncocytoma of kidney (disorder) 6
hurthle cell tumor 43
oncocytoma, renal 43
oncocytoma kidney 30
oncocytoma renal 30

External Ids:

NCIt27 C4526
SNOMED-CT40 254922006

Related Diseases for Renal Oncocytoma

Sources:
13GeneCards, 14GeneDecks
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Diseases related to renal oncocytoma by text searches and GeneDecks gene sharing:

(show top 50)    (show all 372)
idRelated DiseaseScoreTop Affiliating Genes
1oxyphilic adenoma29.8CLDN7, CLDN8, S100A1, CDH16, FLCN, PVALB
2renal cell carcinoma29.3KIT, PCNA, VIM, VHL, CLDN7, CLDN8
3chromophobe renal cell carcinoma29.3KIT, PCNA, VIM, VHL, CLDN7, CLDN8
4mitochondrial complex i deficiency29.0MT-ND3, FH, NDUFS4
5conjunctivitis27.9KITLG, VIM, AQP6, CCND1, TP53, KRT20
6carcinoma24.8KIT, KITLG, PCNA, VIM, VHL, CLDN7
7uterine benign neoplasm13.7MAGEA4, CTAG1B
8ovarian large-cell neuroendocrine carcinoma13.6KRT7, KRT20
9paraurethral gland neoplasm13.6KRT7, KRT20
10dermoid cyst of ovary13.5VIM, KRT20
11papillary adenoma13.5VIM, KRT7, PRCC
12hereditary leiomyomatosis and renal cell cancer13.5SDHB, FH
13pancreatic ductal carcinoma13.5KRT8, KRT7, KRT20
14bladder adenocarcinoma13.5KRT7, KRT20
15mucinous ovarian cystadenoma13.5KRT7, KRT20, PSG2
16indolent systemic mastocytosis13.4KIT, KITLG
17mammary paget's disease13.4KRT8, KRT7, KRT14
18nephrogenic adenoma13.4MUC1, CDH16, KRT7
19horseshoe kidney13.4MME, KRT7, KRT20
20clear cell ependymoma13.3VIM, MUC1
21prostate stromal sarcoma13.3VIM, MUC1
22chondroblastoma13.3VIM, S100A1, KRT8, KRT7
23malignant peripheral nerve sheath tumor13.3KIT, VIM, S100A1
24pancreatic mucinous cystadenoma13.3KIT, MME, KRT20
25chondroma13.3KIT, SDHB, S100A1
26ossifying fibromyxoid tumor13.3VIM, S100A1, MME
27mast-cell sarcoma13.3KIT, KITLG, VIM
28vhl-related pheochromocytoma13.3VHL, SDHB
29pseudomyxoma peritonei13.3VIM, KRT7, KRT20, PSG2
30aggressive systemic mastocytosis13.3KIT, KITLG
31mucinous cystadenocarcinoma13.3MUC1, KRT7, KRT20
32ampulla of vater adenocarcinoma13.3MUC1, KRT7, KRT20
33spindle cell sarcoma13.3VIM, MUC1, KRT7
34metanephric adenoma13.3VIM, MUC1, KRT7
35cutaneous paget's disease13.3MUC1, KRT7, KRT20
36adenoid squamous cell carcinoma13.3VIM, MUC1
37endometrial mucinous adenocarcinoma13.3VIM, MUC1
38breast malignant phyllodes tumor13.3KIT, VIM, MME
39clear cell meningioma13.3VIM, MUC1
40myxopapillary ependymoma13.3VIM, MUC1, KRT7
41chondroid chordoma13.3VIM, MUC1, S100A1
42chordoid glioma13.3VIM, MUC1, KRT7
43endometrial stromal sarcoma13.3KIT, VIM, MME
44biphasic synovial sarcoma13.3VIM, MUC1, CTAG1B
45sex cord-gonadal stromal tumor13.2VIM, MUC1, KRT7
46sarcomatoid mesothelioma13.2VIM, MUC1, S100A1
47familial renal cell carcinoma13.2VHL, SDHB, FH
48mesenchymal chondrosarcoma13.2VIM, MUC1
49hereditary pancreatitis13.2MAGEA4, CTAG1B, KRT8, PSG2
50malignant mixed mullerian tumor13.2VIM, TP53, KRT7

Graphical network of the top 20 diseases related to renal oncocytoma:



Graphical network of diseases related to renal oncocytoma

Clinical Features for Renal Oncocytoma

Drugs & Therapeutics for Renal Oncocytoma

Sources:
4CenterWatch, 29NIH Clinical Center, 5ClinicalTrials
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Approved drugs:

Search CenterWatch for renal oncocytoma

Drug clinical trials:

Search ClinicalTrials for renal oncocytoma

Search NIH Clinical Center for renal oncocytoma

Search CenterWatch for renal oncocytoma

Genetic Tests for Renal Oncocytoma

Anatomical Context for Renal Oncocytoma

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22MalaCards
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MalaCards organs/tissues related to renal oncocytoma:

22
Kidney

Phenotypes for genes affiliated with Renal Oncocytoma

Sources:
25MGI
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MGI Mouse Phenotypes related to renal oncocytoma:

25 (show all 11)
idDescriptionMGI Source AccessionScoreTop Affiliating Genes
1liver/biliary system phenotypeMP:00053709.1TP53, VHL, KIT
2hematopoietic system phenotypeMP:00053978.1EPCAM, EGLN2, KRT8, CCND1, CD3E, MST1R
3muscle phenotypeMP:00053697.8PVALB, EGLN2, NDUFS4, TP53, CAV1, ANKRD2
4immune system phenotypeMP:00053877.7NDUFS4, KRT14, KRT8, TP53, CCND1, MME
5tumorigenesisMP:00020067.5KRT14, TP53, CAV1, CCND1, FLCN, MUC1
6cardiovascular system phenotypeMP:00053856.8NDUFS4, KRT8, TP53, CAV1, CCND1, FLCN
7mortality/agingMP:00107686.8EPCAM, KRT14, KRT8, TP53, CAV1, CCND1
8integument phenotypeMP:00107716.2KIT, EGLN2, NDUFS4, KRT14, DLG2, TP53
9reproductive system phenotypeMP:00053896.2CAV1, TP53, KRT8, KRT14, EGLN2, ROS1
10homeostasis/metabolism phenotypeMP:00053766.0CCND1, CAV1, TP53, KRT14, NDUFS4, EGLN2
11cellular phenotypeMP:00053845.9EPCAM, PVALB, EGLN2, NDUFS4, KRT14, TP53

Publications for genes affiliated with Renal Oncocytoma

Sources:
35PubMed
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Articles related to renal oncocytoma:

(show all 46)
idTitleAuthorsYearAffiliating Genes
1Immunohistochemical expression of tumor antigens MAGE -A3/4 and NY-ESO-1 in renal oncocytoma and chromophobe renal cell carcinoma. (20591578)DemiroviA8 A.... KruA!lin B.2010MAGEA4, MAGEA3, CTAG1B
2Gene expression profiling of chromophobe renal cell c arcinomas and renal oncocytomas by Affymetrix GeneChip using pooled and individ ual tumours. (19680475)Yusenko M.V.... Kovacs G.2009S100A1, CD82, AQP6
3Immunohistochemical stain for cytokeratin 7, S100A1 and claudin 8 is valuable in differential diagnosis of chromophobe renal cell carcinoma from renal oncocytoma. (19302533)Kim S.S.... Choi C.2009KRT7, S100A1, CLDN8
4Does CD10 immunoexpression have a diagnostic utility in the differential diagnosis of renal oncocytomas and eosinophilic variants of chromophobe renal cell carcinomas? (19152193)Mete O.... Uysal V.2009MME
5Oncocytic renal cell carcinoma with immunohistochemical properties of renal oncocytoma. (18947937)Mai K.T.... Belanger E.C.2009KIT, VIM, KRT7
6CCND1 rearrangements and cyclin D1 overexpression in renal oncocytomas: frequency, clinicopathologic features, and utility in differ entiation from chromophobe renal cell carcinoma. (19386349)Sukov W.R.... Cheville J.C.2009CCND1
7Claudin-7 and claudin-8: immunohistochemical markers for the differential diagnosis of chromophobe renal cell carcinoma and renal oncocytoma. (18799195)Osunkoya A.O.... Young A.N.2009CLDN7, CLDN8
8SDHB-associated renal oncocytoma suggests a broadenin g of the renal phenotype in hereditary paragangliomatosis. (19184535)Henderson A.... Maher E.R.2009SDHB
9Renal oncocytoma with and without intravascular exten sion into the branches of renal vein have the same morphological, immunohistoch emical, and genetic features. (18066590)Hes O.... Yang X.2008PVALB
10Renal oncocytoma with and without intravascular exten sion into the branches of renal vein have the same morphological, immunohistoch emical and genetic features. (18196270)Hes O.... Yang X.2008PVALB
11Somatic pairing of chromosome 19 in renal oncocytoma is associated with deregulated ELGN2-mediated oxygen-sensing response. (18773095)Koeman J.M.... Furge K.A.2008EGLN2
12Vimentin reactivity in renal oncocytoma: immunohistochemical study of 234 cases. (18081436)Hes O.... Yang X.J.2007VIM
13Claudin-7 is highly expressed in chromophobe renal cell carcinoma and renal oncocytoma. (17449941)Choi Y.D.... Choi C.2007CLDN7, PVALB
14S100A1: a powerful marker to differentiate chromophobe renal cell carcinoma from renal oncocytoma. (17394501)Li G.... Tostain J.2007S100A1
15Immunohistochemical analysis of chromophobe renal cell carcinoma, renal oncocytoma, and clear cell carcinoma: an optimal and practical panel for differential diagnosis. (17683191)Liu L.... Bostwick D.G.2007KIT, VIM, KRT7
16ARPP protein is selectively expressed in renal oncocytoma, but rarely in renal cell carcinomas. (17206105)Shomori K.... Moriyama M.2007ANKRD2
17Diagnostic value of cytokeratin 7 and parvalbumin in differentiating chromophobe renal cell carcinoma from renal oncocytoma. (16927643)Adley B.P.... Yang X.J.2006KRT7, PVALB
18Differential expression of a new isoform of DLG2 in renal oncocytoma. (16640776)Zubakov D.... Kovacs G.2006DLG2
19Expression of kidney-specific cadherin in chromophobe renal cell carcinoma and renal oncocytoma. (16753598)Adley B.P.... Yang X.J.2006CDH16
20Caveolin-1 immunohistochemical analysis in differentiating chromophobe renal cell carcinoma from renal oncocytoma. (16613342)Garcia E.... Li M.2006CAV1, KRT7
21Cytokeratin 14 is not a specific marker for renal oncocytomas. (17001169)Nordling S.2006KRT14
22C-kit expression in renal oncocytomas and chromophobe renal cell carcinomas. (15791570)Huo L.... Yang X.J.2005KIT
23Insertion (8;11) in a renal oncocytoma with multifocal transformation to chromophobe renal cell carcinoma. (16337860)Salido M.... SolAc F.2005CCND1
24Expression of CD3 antigens in renal tubule epithelium and renal oncocytomas. (16308105)Alroy J.... Cheville J.C.2005CD3E
25Expression of KIT (CD117) in renal cell carcinoma and renal oncocytoma. (16015044)Kruger S.... Horny H.P.2005KIT, KITLG
26Renal oncocytoma with loss of chromosomes Y and 1 evolving to papillary carcinoma in connection with gain of chromosome 7. Coincidence or progression? (16271962)Al-Saleem T.... Greenberg R.E.2005VIM, KRT7
27Can renal oncocytoma be differentiated from its renal mimics? The utility of anti-mitochondrial, caveolin 1, CD63 and cytokeratin 14 antibodies in the differential diagnosis. (16133362)Mete O.... Uysal V.2005CAV1, KRT14
28Expression of kidney-specific cadherin distinguishes chromophobe renal cell carcinoma from renal oncocytoma. (15712178)Mazal P.R.... Susani M.2005VIM, KRT7, CDH16
29Immunohistochemical identification of intracytoplasmic lumens by cytokeratin typing may differentiate renal oncocytomas from chromophobe renal cell carcinomas. (14702167)Kuroda N.... Enzan H.2004KRT7
30Overexpression of KIT (CD117) in chromophobe renal cell carcinoma and renal oncocytoma. (15198361)Pan C.C.... Chiang H.2004KIT
31Keratin immunohistochemistry in renal cell carcinoma subtypes and renal oncocytomas: a systematic analysis of 233 tumors. (14727107)Langner C.... Zigeuner R.2004VIM, KRT8, KRT20
32The diagnostic utility of MOC31, BerEP4, RCC marker and CD10 in the classification of renal cell carcinoma and renal oncocytoma: an immunohistochemical analysis of 328 cases. (15500648)Pan C.C.... Ho D.M.2004VIM, MME, MUC1
33Lack of mutation of the folliculin gene in sporadic chromophobe renal cell carcinoma and renal oncocytoma. (14961590)Nagy A.... Kovacs G.2004FLCN
34The Ron proto-oncogene product is a phenotypic marker of renal oncocytoma. (12766581)Rampino T.... Dal Canton A.2003MST1R
35Mitochondrial complex I is deficient in renal oncocytomas. (12844484)Simonnet H.... Godinot C.2003FH, NDUFS4
36Cytokeratin 20 immunoreactivity in renal oncocytomas. (11410616)Stopyra G.A.... Multhaupt H.A.2001KRT20
37Can renal oncocytomas be distinguished from renal cell carcinoma on fine-needle aspiration specimens? A study of conventional smears in conjunction with ancillary studies. (11748579)Liu J.... Fanning C.V.2001VIM
38Utility of cytokeratin 7 for distinguishing chromophobe renal cell carcinoma from renal oncocytoma. (10765081)Leroy X.... Gosselin B.2000KRT7
39Pathology and proliferative activity of renal-cell carcinomas (RCCS) and renal oncocytomas in patients with different radiation exposure after the Chernobyl accident in Ukraine. (10956401)Romanenko A.... Llombart-Bosch A.2000PCNA
40Bilateral multiple renal oncocytomas and cysts associated with a constitutional translocation (8;9)(q24.1;q34.3) and a rare constitutional VHL missense substitution. (9523203)Teh B.T.... Nicol D.1998VHL
41Biological properties of renal oncocytoma cells in culture. (8659013)Hawkins N.J.... Ward R.L.1996TP53
42Renal oncocytoma mimicking hemorrhagic renal cyst. (8749955)Sekido N.... Koiso K.1995PSG2
43Cytokeratin-containing globular filamentous bodies in renal oncocytoma. (1721750)Bonsib S.M.... Bray C.1991VIM
44Renal cell carcinoma vs. renal oncocytoma. Report of a case with overlap features and review of the literature. (1986475)Lazzaro B.... Katz S.M.1991VIM
45Renal oncocytoma: diagnostic utility of cytokeratin-containing globular filamentous bodies. (1708500)Bonsib S.M.... Lager D.J.1991VIM
46Mitochondrial adenosine triphosphatase in the oxyphil cells of a renal oncocytoma. (2138585)Hunter V.R.... Beckner M.E.1990ATP5E

Expression for genes affiliated with Renal Oncocytoma

Sources:
1BioGPS
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Expression patterns in normal tissues for genes affiliated with Renal Oncocytoma

Pathways for genes affiliated with Renal Oncocytoma

Sources:
10EMD Millipore, 41Thomson Reuters, 20KEGG, 3Cell Signaling Technology, 36QIAGEN
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Compounds for genes affiliated with Renal Oncocytoma

Sources:
32Novoseek , 42Tocris Bioscience, 18HMDB, 9DrugBank, 34PharmGKB
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Compounds related to renal oncocytoma according to GeneDecks:

(show top 50)    (show all 74)
idCompoundScoreTop Affiliating Genes
1eosin32 10.1MUC1, VIM
2monochloroacetic acid32 10.0VIM, KITLG, KIT
3toluidine32 10.0S100A1, VIM, KITLG, KIT
4roscovitine32 9.8PCNA, VIM
5mucicarmine32 9.7KRT14, KRT20, KRT7, S100A1, MUC1, VIM
62-methoxyethanol32 9.7VIM, S100A1, KRT14
7alpha-ketoglutarate32 9.6EGLN2, NDUFS4, FH, SDHB, VHL
8reticulin32 9.6KRT7, MUC1, VIM, PCNA
9pyruvate32 9.3NDUFS4, FH, MT-ND3, SDHB
10glucose32 9.2PSG2, KRT7, KRT8, FH, MME, VHL
11estrogen32 9.2PVALB, KRT14, KRT20, KRT8, S100A1, VHL
12retinoic acid32 42 18 11.2KRT7, KRT8, CCND1, MME, KITLG, KIT
13oxygen32 18 10.2NDUFS4, CAV1, FH, SDHB, KITLG
14biotin32 9 18 9 12.1S100A1, MUC1, VIM, PCNA, KITLG
15gold32 9.1PSG2, KRT8, CAV1, MUC1, KITLG, KIT
16methotrexate32 34 42 9 9 12.9KRT7, MUC1, VIM, PCNA, KITLG, KIT
17b 72332 8.9PSG2, KRT20, KRT7, KRT8, S100A1, MUC1
18matrigel32 8.7KRT7, KRT8, CAV1, CCND1, MME, MUC1
19agar32 8.7KRT8, CAV1, CCND1, MUC1, VIM, KITLG
20crcs32 8.7TP53, CCND1, MME, MUC1
21bromodeoxyuridine32 8.6KRT14, KRT8, CCND1, MME, VIM, PCNA
222-methoxyestradiol32 18 9.5TP53, CAV1, CCND1, PCNA
23hematoxylin32 8.5PSG2, KIT, PCNA, VIM, MUC1, S100A1
24cysteine32 8.4NDUFS4, KRT14, KRT8, CAV1, S100A1, MUC1
25formaldehyde32 18 9.4PSG2, PVALB, KRT20, KRT7, CCND1, MUC1
26retinoid32 8.4KRT14, KRT7, KRT8, TP53, CCND1, VIM
27glycogen32 18 9.3CCND1, KRT8, KRT7, PSG2, S100A1, MUC1
28creatinine32 8.2PSG2, KRT8, FH, MME, MUC1, SDHB
29adriamycin32 8.2PSG2, KRT8, TP53, CCND1, MME, MUC1
305-aza-2deoxycytidine32 8.2KRT7, CTAG1B, TP53, CAV1, VHL, VIM
31iron32 18 9.1PVALB, EGLN2, NDUFS4, KRT14, KRT20, KRT7
325fluorouracil32 8.1EPCAM, PSG2, TP53, MUC1, PCNA, KITLG
33cytarabine32 34 9 9 11.0TP53, MME, MUC1, VIM, PCNA, KITLG
34nitric oxide32 9 18 9 11.0PSG2, PVALB, NDUFS4, CAV1, MME, S100A1
35lactate32 8.0PSG2, NDUFS4, KRT8, FH, MME, ATP5E
36actinomycin d32 7.9KRT8, TP53, MME, MUC1, VHL, VIM
37paclitaxel32 34 9 9 10.8KRT8, TP53, CAV1, CCND1, VIM, PCNA
38tamoxifen32 34 9 9 10.8KRT14, KRT8, TP53, CAV1, CCND1, MUC1
39butyrate32 7.8KRT14, KRT8, TP53, CCND1, MUC1, VIM
40cycloheximide32 7.7KRT8, TP53, CAV1, CCND1, MME, VIM
41cisplatin32 34 9 9 10.5KRT14, KRT8, TP53, CAV1, CCND1, MUC1
42oligonucleotide32 7.5KRT8, TP53, CAV1, CCND1, MAGEA3, CLDN7
43testosterone32 9 18 9 10.4CCND1, CAV1, KRT8, KRT7, KRT20, MME
44thymidine32 18 8.3EPCAM, PSG2, TP53, CCND1, MME, MUC1
45doxorubicin32 34 9 9 10.2PSG2, NDUFS4, KRT20, KRT8, TP53, CAV1
46progesterone32 42 9 18 9 10.8TP53, KRT8, KRT7, KRT20, KRT14, CAV1
47tyrosine32 6.6CCND1, CAV1, KRT8, KRT7, KRT20, KRT14
48vegf32 5.9CAV1, TP53, KRT8, KRT7, KRT20, EGLN2
49serine32 5.8CAV1, TP53, KRT8, KRT14, NDUFS4, PVALB
50paraffin32 5.6PVALB, PSG2, EPCAM, KRT14, KRT20, KRT7

GO Terms for genes affiliated with Renal Oncocytoma

Sources:
12Gene Ontology
See all sources

Cellular components related to renal oncocytoma according to GeneDecks:

idNameGO IDScoreTop Affiliating Genes
1intermediate filamentGO:0058829.6VIM, KRT8, KRT7, KRT20, KRT14

Biological processes related to renal oncocytoma according to GeneDecks:

idNameGO IDScoreTop Affiliating Genes
1germ cell programmed cell deathGO:0352349.9KIT, KITLG

Molecular functions related to renal oncocytoma according to GeneDecks:

idNameGO IDScoreTop Affiliating Genes
1structural molecule activityGO:0051989.3KRT7, KRT8, CAV1, CLDN8, CLDN7
2identical protein bindingGO:0428028.5TP53, S100A1, CLDN8, CLDN7, VIM, PCNA
3enzyme bindingGO:0198998.5VHL, MST1R, CCND1, CAV1, TP53
4protein bindingGO:0055153.6EPCAM, MAGEA4, CCND1, CAV1, TP53, DLG2

Sources for Renal Oncocytoma

2CDC
11FMA
18HMDB
19ICD9CM
20KEGG
24MeSH
25MGI
27NCIt
28NDF-RT
31NINDS
32Novoseek
33OMIM
35PubMed
36QIAGEN
43UMLS