Sources: 12Gene Ontology See all sources |
Cellular components related to rhabdomyosarcoma according to GeneDecks: (show all 11)
| id | Name | GO ID | Score | Top Affiliating Genes | | 1 | cytoplasm | GO:005737 | INF | TNFSF14, TERT, PTHLH, PTPN11, SUFU, DDX1 | | 2 | nucleus | GO:005634 | INF | CALCA, APEX1, MDM2, IL15, MEF2A, FGFR4 | | 3 | plasma membrane | GO:005886 | INF | TNF, TNFRSF10B, TNFSF13B, TNFSF14, PTCH1, PTPRC | | 4 | nucleoplasm | GO:005654 | 11.2 | PGR, TP53, ESR2, ESR1, AKT1, CARM1 | | 5 | protein complex | GO:043234 | 10.8 | DMD, EIF4EBP1, ACTA2, TCF3, SYP, PRKCA | | 6 | extracellular region | GO:005576 | 9.8 | CYR61, SPP1, CTGF, PLAUR, NOG, PTHLH | | 7 | cytosol | GO:005829 | INF | PSMA2, CTGF, ODC1, DICER1, , DMD | | 8 | cell surface | GO:009986 | INF | RPS6KB1, PLAUR, DMD, TNF, ABCB1, | | 9 | extracellular space | GO:005615 | INF | PTHLH, PTH, TNFSF14, TNFSF13B, TNFSF10, TNF | | 10 | cyclin-dependent protein kinase holoenzyme complex | GO:000307 | INF | CCND1, , CCNE1, CDK4, CDKN1A, CDK6 | | 11 | integral to plasma membrane | GO:005887 | INF | ABCC1, , AGER, TSPAN31, PDGFRB, PDGFRA |
Biological processes related to rhabdomyosarcoma according to GeneDecks: (show top 50)
(show all 91)
| id | Name | GO ID | Score | Top Affiliating Genes | | 1 | apoptotic process | GO:006915 | INF | , NBN, VIM, BID, PAX3, BCL2 | | 2 | virus-host interaction | GO:019048 | 11.3 | RB1, VIM, BAX, KAT2B, CD247, ITGA2 | | 3 | muscle filament sliding | GO:030049 | 11.2 | VIM, TNNI1, DMD, ACTC1, TTN, DES | | 4 | positive regulation of muscle cell differentiation | GO:051149 | 11.2 | BOC, MYOG, MYF5, MYF6, MYOD1, CDON | | 5 | muscle cell differentiation | GO:042692 | 11.1 | BOC, MYOG, MYF5, MYF6, MYOD1, CDON | | 6 | epidermal growth factor receptor signaling pathway | GO:007173 | 11.1 | MTOR, FOXO1, FOXO3, MDM2, AP2B1, MAP2K2 | | 7 | axon guidance | GO:007411 | 11.0 | NCAM1, BOC, CFL1, CDH4, ITGA2, FGFR1 | | 8 | nerve growth factor receptor signaling pathway | GO:048011 | 11.0 | MTOR, FOXO1, FOXO3, IRS1, MEF2A, MDM2 | | 9 | blood coagulation | GO:007596 | 11.0 | VEGFA, VCL, CLU, KDM1A, YWHAZ, CFL1 | | 10 | insulin receptor signaling pathway | GO:008286 | 10.9 | MTOR, FOXO1, IRS1, INS, INSR, FGFR1 | | 11 | G1/S transition of mitotic cell cycle | GO:000082 | 10.9 | PIM2, PCNA, RB1, BCL2, CDK6, CDKN1A | | 12 | positive regulation of fibroblast proliferation | GO:048146 | 10.8 | MYC, UTS2, UTS2R, CDK6, CDKN1A, CDK4 | | 13 | negative regulation of transcription from RNA polymerase II promoter | GO:000122 | 10.7 | MYC, BMP4, RARB, PAX5, KDM1A, YBX1 | | 14 | positive regulation of ERK1 and ERK2 cascade | GO:070374 | 10.7 | BMP4, CD44, MIF, FGFR3, FGFR4, MAPK3 | | 15 | response to estradiol stimulus | GO:032355 | 10.6 | NCOA1, BMP4, RARA, BID, INSR, ENO2 | | 16 | G1 phase of mitotic cell cycle | GO:000080 | 10.6 | RB1, CDK6, CDKN1A, CDKN2C, CDKN2B, CDKN2A | | 17 | germ cell development | GO:007281 | 10.6 | BMP4, BCL2L1, BAX, MTOR, MSH2, AKT1 | | 18 | response to ethanol | GO:045471 | 10.5 | CNR1, BCL2, MSTN, INSR, MGMT, IL4 | | 19 | response to virus | GO:009615 | 10.5 | PIM2, CLU, CHRM2, CFL1, CDK6, GTF2F1 | | 20 | gene expression | GO:010467 | 10.5 | MYC, RARA, RARB, YWHAZ, YBX1, KAT2B | | 21 | positive regulation of DNA replication | GO:045740 | 10.4 | KITLG, INS, INSR, MET, IGF1R, IGF1 | | 22 | positive regulation of cell migration | GO:030335 | 10.2 | VEGFA, MMP14, FOXF1, IRS1, INS, INSR | | 23 | cell cycle arrest | GO:007050 | 10.2 | RB1, NBN, MYC, MSH2, ATM, KAT2B | | 24 | positive regulation of apoptotic process | GO:043065 | 10.2 | NCOA1, CNR1, BMP4, RARB, BID, CLU | | 25 | activation of pro-apoptotic gene products | GO:008633 | 10.2 | MYC, BID, BCL2, BAX, MAPK8, CASP8 | | 26 | release of cytochrome c from mitochondria | GO:001836 | 10.0 | MYC, BID, CLU, BCL2, BCL2L1, BAX | | 27 | platelet activation | GO:030168 | 10.0 | VEGFA, VCL, CLU, YWHAZ, CFL1, IL6 | | 28 | positive regulation of glycogen biosynthetic process | GO:045725 | 10.0 | IRS1, INS, INSR, IGF2, IGF1, AKT1 | | 29 | anti-apoptosis | GO:006916 | 10.0 | PIM2, PAX7, BCL2, BCL2L1, YWHAZ, CFL1 | | 30 | positive regulation of MAP kinase activity | GO:043406 | 9.7 | KITLG, VEGFA, FGFR1, ILK, ERBB2, TNF | | 31 | response to drug | GO:042493 | 9.7 | NBN, MYC, UTS2, UTS2R, BCL2, MVP | | 32 | peptidyl-serine phosphorylation | GO:018105 | 9.6 | BCL2, MTOR, ATM, ILK, MAPK8, MAPK14 | | 33 | MAPK cascade | GO:000165 | 9.4 | MYC, INS, FGFR1, FGFR3, MEF2A, MAP2K2 | | 34 | negative regulation of apoptotic process | GO:043066 | 8.7 | VEGFA, MYC, BMP4, CLU, KDM1A, BCL2 | | 35 | negative regulation of cell proliferation | GO:008285 | INF | PIM2, BMP4, RARB, KAT2B, CDK6, CDKN1A | | 36 | positive regulation of protein phosphorylation | GO:001934 | INF | VEGFA, BMP4, MTOR, INSR, MAPK3, | | 37 | protein phosphorylation | GO:006468 | INF | PIM2, MYOD1, RARA, MTOR, CDK6, CDK9 | | 38 | phosphatidylinositol-mediated signaling | GO:048015 | INF | PCNA, , MTOR, FOXO1, FOXO3, IRS1 | | 39 | positive regulation of transcription from RNA polymerase II promoter | GO:045944 | INF | NCOA1, NCOA3, RB1, VEGFA, LMO4, MYC | | 40 | induction of apoptosis by intracellular signals | GO:008629 | INF | MYC, BID, CLU, BCL2, BCL2L1, BAX | | 41 | positive regulation of cell proliferation | GO:008284 | INF | , NBN, VEGFA, MYC, RARA, BCL2L1 | | 42 | fibroblast growth factor receptor signaling pathway | GO:008543 | INF | MTOR, , FOXO1, FOXO3, FGFR1, FGFR3 | | 43 | cell proliferation | GO:008283 | INF | PIM2, KITLG, PCNA, , NBN, KDM1A | | 44 | positive regulation of sequence-specific DNA binding transcription factor activity | GO:051091 | INF | NCOA3, , KDM1A, JUP, IL4, IL6 | | 45 | protein autophosphorylation | GO:046777 | INF | , MTOR, ATM, INSR, FGFR1, FGFR3 | | 46 | positive regulation of gene expression | GO:010628 | INF | NCOA3, , VEGFA, CD44, MET, MAPK8 | | 47 | positive regulation of transcription, DNA-dependent | GO:045893 | INF | PIM2, NCOA1, NCOA3, RB1, MYC, BMP4 | | 48 | activation of MAPK activity | GO:000187 | INF | , INSR, MET, MAP2K2, MAPK3, MAPK14 | | 49 | positive regulation of MAPK cascade | GO:043410 | INF | , INS, INSR, FGFR1, FGFR3, IL6 | | 50 | signal transduction | GO:007165 | INF | , KITLG, RARA, RARB, UTS2R, YWHAZ |
Molecular functions related to rhabdomyosarcoma according to GeneDecks: (show all 20)
| id | Name | GO ID | Score | Top Affiliating Genes | | 1 | protein homodimerization activity | GO:042803 | INF | PDGFRA, NOG, SMAD4, TERT, ERBB3, CARM1 | | 2 | protein binding | GO:005515 | INF | EPHB1, PROM1, PSMC4, PSMA2, OS9, STAT5B | | 3 | protein kinase binding | GO:019901 | INF | , CCND1, HSPB1, TP53, TP73, PTPRC | | 4 | protein serine/threonine kinase activity | GO:004674 | INF | AKT1, PLK1, PDPK1, , TTN, DCLK1 | | 5 | identical protein binding | GO:042802 | 11.0 | TP73, TP53, ERBB2, ESR1, AKT1, TNF | | 6 | transcription coactivator activity | GO:003713 | 10.9 | CARM1, ESR2, CTNNB1, SMARCA4, SMARCB1, COPS5 | | 7 | chromatin binding | GO:003682 | 10.8 | DDX1, CTNNB1, SMAD4, SMARCA4, SKI, TOP1 | | 8 | insulin receptor binding | GO:005158 | 10.6 | TLN1, PDPK1, PTPN11, IGF1, IGF2, IGF1R | | 9 | receptor binding | GO:005102 | 10.5 | TNFSF14, CRAT, PDGFRB, EDN3, CXADR, CXCL12 | | 10 | enzyme binding | GO:019899 | 10.3 | CTNNB1, PLAUR, EGFR, TTN, THRB, TGFB1 | | 11 | cyclin-dependent protein kinase inhibitor activity | GO:004861 | 10.3 | CDKN1C, CDKN2A, CDKN2B, CDKN2C, CDKN1A, KAT2B | | 12 | androgen receptor binding | GO:050681 | 10.2 | SMARCA4, CTNNB1, CCNE1, FHL2, KDM1A, RB1 | | 13 | protein heterodimerization activity | GO:046982 | 10.2 | ENO2, MCL1, APOB, IL12A, MET, ERBB3 | | 14 | transcription regulatory region DNA binding | GO:044212 | 10.2 | CTNNB1, SMAD4, WT1, TFAP2A, TCF3, STAT3 | | 15 | insulin-like growth factor receptor binding | GO:005159 | 10.0 | IGF1, IGF2, INSR, INS, IRS1, YWHAG | | 16 | transcription factor binding | GO:008134 | 9.8 | HMGA2, TP53, TP73, TPT1, SUFU, CTNNB1 | | 17 | growth factor activity | GO:008083 | 9.6 | IGF2, IGF1, CTGF, NOV, TGFB1, CXCL12 | | 18 | cytokine activity | GO:005125 | 9.2 | IL6, TNF, TNFSF10, TNFSF13B, TNFSF14, SPP1 | | 19 | protein tyrosine kinase activity | GO:004713 | INF | IGF1R, ERBB3, ERBB2, PDGFRB, EGFR, TTN | | 20 | ATP binding | GO:005524 | INF | MYH7, , ABCG2, ABCC1, ABCB1, EGFR |
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