MCID: RHM011

Rheumatoid Arthritis malady

Summaries for Rheumatoid Arthritis

Sources:
6Disease Ontology, 23MedlinePlus, 2CDC, 44Wikipedia, 33OMIM, 22MalaCards
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MedlinePlus: Rheumatoid arthritis (ra) is a form of arthritis that causes pain, swelling, stiffness and loss of function in your joints. it can affect any joint but is common in the wrist and fingers. more women than men get rheumatoid arthritis. it often starts between ages 25 and 55. you might have the disease for only a short time, or symptoms might come and go. the severe form can last a lifetime. rheumatoid arthritis is different from osteoarthritis, the common arthritis that often comes with older age. ra can affect body parts besides joints, such as your eyes, mouth and lungs. ra is an autoimmune disease, which means the arthritis results from your immune system attacking your body's own tissues. no one knows what causes rheumatoid arthritis. genes, environment and hormones might contribute. treatments include medicine, lifestyle changes and surgery. these can slow or stop joint damage and reduce pain and swelling. nih: national institute of arthritis and musculoskeletal and skin diseases23

MalaCards: Rheumatoid Arthritis, also known as arthritis, is related to carcinoma and leukemia. An important gene associated with Rheumatoid Arthritis is SERPINH1 (serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)), and among its related pathways are Antioxidant Action of Vitamin-C and Akt Signaling. The drugs diflunisal and gold and the compounds atp and cholesterol have been mentioned in the context of this disorder. Affiliated tissues include joint, bone marrow and whole blood, and related mouse phenotypes are homeostasis/metabolism and cellular.

Disease Ontology: An arthritis that is an autoimmune disease which attacks healthy cells and tissue located in joint.6

CDC: Rheumatoid arthritis (RA) causes premature mortality, disability and compromised quality of life in the industrialized and developing world (1).  Rheumatoid arthritis is a systemic inflammatory disease which manifests itself in multiple joints of the body. The inflammatory process primarily affects the lining of the joints (synovial membrane), but can also affect other organs. The inflamed synovium leads to erosions of the cartilage and bone and sometimes joint deformity. Pain, swelling, and redness are common joint manifestations. Although the causes are unknown, RA is believed to be the result of a faulty immune response. RA can begin at any age and is associated with fatigue and prolonged stiffness after rest. There is no cure for RA, but new effective drugs are increasingly available to treat the disease and prevent deformed joints. In addition to medications and surgery, good self-management, including exercise, are known to reduce pain and disability.2

Wikipedia: Rheumatoid arthritis (RA) is a chronic, systemic inflammatory disorder that may affect many tissues and...44 more...

OMIM: 180300

Aliases & Descriptions for Rheumatoid Arthritis

Sources:
6Disease Ontology, 8DISEASES, 33OMIM, 32Novoseek , 23MedlinePlus, 2CDC, 43UMLS, 27NCIt, 40SNOMED-CT, 24MeSH, 19ICD9CM
See all sources

Aliases & Descriptions:

rheumatoid arthritis 6 8 33 32 23 43
arthritis 6 43
polyarthritis, rheumatic 6
atrophic arthritis 6
polyarthritis 43

External Ids:

SNOMED-CT40 156471009, 287010008, 69896004 156481008, more
ICD9CM19 714.0

Related Diseases for Rheumatoid Arthritis

Sources:
13GeneCards, 14GeneDecks
See all sources

Diseases related to rheumatoid arthritis by text searches and GeneDecks gene sharing:

(show top 50)    (show all 953)
idRelated DiseaseScoreTop Affiliating Genes
1carcinoma218.8PIK3CD, PIK3CG, PIN1, LRP1, LRP2, LRP5
2leukemia203.1PIK3CD, PIBF1, PIK3CG, PIN1, LRP1, LRP5
3lupus erythematosus155.7ZNF311, PIK3CD, PIK3CG, LRP2, SH2B3, PDCD1
4melanoma153.7PIK3CD, PIK3CG, LRP1, KL, KLF5, PDCD1
5neuronitis147.0PIK3CD, PIK3CG, PIN1, LRP1, LRP2, SH2D1A
6thyroiditis138.4PIK3CG, PIN1, LRP1, LRP2, RFC1, PDCD5
7atherosclerosis132.5PIK3CG, LRP1, LRP2, LRP5, KL, KLF5
8fibrosis128.6PIK3CG, PIN1, LRP1, KL, PDE4A, RECK
9osteoarthritis120.2PIK3CG, LRP5, KL, PDE4A, RELA, RETN
10cervicitis117.3PIK3CG, PIN1, KL, RFC1, PDCD1, PDCD1LG2
11hypoxia117.0PIK3CD, PIK3CG, LRP1, LRP5, KLF5, PDE4A
12diabetes mellitus114.3PIK3CD, PIK3CG, LRP5, SH2B3, PDCD1, PDCD1LG2
13inflammatory bowel disease112.8RFC1, PDE4A, RELA, RETN, WARS, KIT
14psoriasis111.9LRP1, RFC1, PDE4A, RETN, CNR1, KIR2DS3
15cerebritis111.1PIK3CG, LRP1, LRP2, NDEL1, PDE4A, RELA
16gonococcal synovitis110.1PIK3CG, LRP1, PDCD1, PDE4A, RECK, REL
17cholesterol108.6PIK3CD, PIK3CG, LRP1, LRP2, LRP5, KL
18prostatitis107.8PIK3CD, PIBF1, PIK3CG, PIN1, LRP1, LRP2
19sarcoma105.9PIK3CD, PIK3CG, PDE4A, RECK, RELA, RELB
20pneumonia104.2KL, PDE4A, RELA, CNDP2, VTN, SFTPD
21obesity104.0PIK3CG, LRP1, LRP5, RECK, RELA, RETN
22hypertension102.8PIK3CG, LRP1, LRP5, SH2B3, KL, KLF5
23nephropathy102.7LRP1, LRP2, PDCD1, RELA, RETN, CNDP2
24myocardial infarction101.9PIK3CG, LRP1, SH2B3, PDCD1, PDE4A, RECK
25pancreatitis98.9PIK3CD, PIK3CG, PIN1, LRP1, LRP2, LRP5
26peritonitis98.9PIBF1, LRP1, RELA, RELB, CNTF, KIT
27ischemia98.2PIK3CG, PDE4A, RELA, RETN, CNR1, CNR2
28retinitis96.2PIK3CG, LRP1, LRP2, LRP5, PDE4A, CNR1
29systemic lupus erythematosus93.2LRP2, PDCD1, RECK, VWF, VTN, SELE
30dermatitis92.9PDE4A, REL, RELA, RELB, CNR1, KITLG
31anemia92.8SH2D1A, PDCD1, RELA, KIT, KITLG, VWF
32influenza92.4PIK3CD, PIK3CG, RECK, RELA, KIR2DL1, KIR2DL2
33adenocarcinoma91.7PIK3CG, PIN1, LRP1, PDCD5, RECK, RELA
34pulmonary disease90.5PIK3CG, PIN1, LRP5, PDE4A, RETN, VWF
35gingivitis87.1PIK3CG, CNR1, CNR2, PCNA, BTK, SELE
36schizophrenia86.2PIK3CG, LRP2, KLF12, KLF5, NDEL1, PDE4A
37colorectal cancer85.8PIK3CD, PIK3CG, PIN1, LRP2, LRP5, KL
38cystic fibrosis84.6PIK3CG, PDE4A, RECK, VWF, SFTPD, PCNA
39hepatocellular carcinoma83.1PIK3CD, PIK3CG, PIN1, KL, PDCD1, PDCD1LG2
40insulin resistance80.5PIK3CG, LRP1, RELA, RETN, CNR1, CNTF
41blindness77.9PIBF1, PIK3CG, LRP5, PDE4A, CNR1, CNTF
42squamous cell carcinoma77.5PIN1, RECK, RELA, VTN, RDX, PCNA
43ovarian cancer77.3PIK3CD, PIK3CG, LRP1, PDCD1, RECK, REL
44glomerulonephritis76.9LRP1, LRP2, KIT, KITLG, VWF, VTN
45nephritis76.3LRP2, PDCD1, PDCD5, VWF, VTN, PCNA
46gastric cancer76.2PIK3CG, PIN1, KLF12, KLF5, RFC1, RECK
47sjogren's syndrome74.4PDCD1, RETN, KIR2DS3, KIR2DL1, KIR2DL3, KITLG
48bronchiolitis73.8KIT, KITLG, KIR3DL1, SFTPD, SELE, SELL
49vasculitis73.7LRP1, SH2B3, SH2D1A, PDCD1, VWF, SELE
50immunodeficiency72.9PIK3CD, PDCD1, KIR3DL1, BTK, SELL, VIP

Graphical network of the top 20 diseases related to rheumatoid arthritis:



Graphical network of diseases related to rheumatoid arthritis

Clinical Features for Rheumatoid Arthritis

Sources:
33OMIM
See all sources
Clinical features from OMIM: 180300

Drugs & Therapeutics for Rheumatoid Arthritis

Sources:
4CenterWatch, 29NIH Clinical Center, 5ClinicalTrials, 21LifeMap Discovery™, 43UMLS, 28NDF-RT
See all sources

Genetic Tests for Rheumatoid Arthritis

Anatomical Context for Rheumatoid Arthritis

Sources:
21LifeMap Discovery™, 11FMA, 22MalaCards
See all sources

MalaCards organs/tissues related to rheumatoid arthritis:

22
Bone marrow, Whole blood, Lymph node, Spleen, Brain, Heart, Smooth muscle, Small intestine, Kidney, Liver, Lung, Thyroid, Salivary gland, Adrenal gland, Breast, Skin, Placenta, Tonsil, Myeloid, Monocytes, Nk cells, T cells, B cells, Endothelial, Fetal brain, Fetal liver, Fetal lung, Fetal thyroid, Pituitary

FMA organs/tissues related to rheumatoid arthritis:

11
Joint

LifeMap Discovery
The database of embryonic development, stem cell research and regenerative medicine

Embryonic and adult cells/anatomical compartments related to rheumatoid arthritis:
id Organ / Tissue -> Anatomical Compartment -> Cell Relevance
1 Cartilage -> Temporomandibular Joint  Affected by disease

Phenotypes for genes affiliated with Rheumatoid Arthritis

Sources:
25MGI
See all sources

MGI Mouse Phenotypes related to rheumatoid arthritis:

25 (show all 29)
idDescriptionMGI Source AccessionScoreTop Affiliating Genes
1homeostasis/metabolism phenotypeMP:000537683.9PIK3CD, PIK3CG, LRP1, LRP2, LRP5, KL
2cellular phenotypeMP:000538481.4PIK3CD, PIK3CG, PIN1, LRP2, LRP5, SH2B3
3mortality/agingMP:001076872.6LRP1, LRP5, KL, KLF5, NDEL1, NCF4
4immune system phenotypeMP:000538757.9PIK3CD, LRP1, LRP5, SH2D1A, SH2D2A, KL
5cardiovascular system phenotypeMP:000538555.4PIK3CD, PIK3CG, LRP1, LRP5, KL, KLF5
6hematopoietic system phenotypeMP:000539753.8SH2B3, SH2D1A, SH2D2A, PDCD1, PDCD1LG2, CNTF
7growth/size phenotypeMP:000537853.3PIK3CG, PIN1, LRP1, LRP2, KL, KLF5
8behavior/neurological phenotypeMP:000538643.3LRP1, LRP2, LRP5, KL, RELB, RELN
9nervous system phenotypeMP:000363142.6LRP1, LRP5, KL, NDEL1, PDCD1, PDE4A
10normal phenotypeMP:000287342.2LRP1, LRP5, KLF5, RELA, VTN, SELE
11skeleton phenotypeMP:000539034.4PIK3CD, PIK3CG, LRP1, LRP2, RECK, REL
12digestive/alimentary phenotypeMP:000538133.8LRP2, KL, KLF5, REL, RELB, RELN
13integument phenotypeMP:001077133.5PIK3CG, PIN1, KL, RECK, REL, RELA
14tumorigenesisMP:000200633.2PDCD1LG2, KIT, KITLG, BTK, RB1, RBPJ
15vision/eye phenotypeMP:000539130.8PIN1, LRP2, LRP5, PDCD1, RELA, RELN
16muscle phenotypeMP:000536930.7PIK3CG, LRP1, KL, KLF5, PDCD1, RELA
17liver/biliary system phenotypeMP:000537028.0LRP5, RECK, REL, RELB, RETN, KIT
18no phenotypic analysisMP:000301225.9PIK3CD, LRP2, PDCD1LG2, CNR1, SFRP1, PCNA
19renal/urinary system phenotypeMP:000536725.9LRP2, KL, PDCD1, KIT, RBPJ, SELP
20embryogenesis phenotypeMP:000538025.7LRP5, KLF5, NDEL1, RECK, REL, KIT
21reproductive system phenotypeMP:000538925.5VIP, VEGFA, VDR, BMP2, BMP7, LIF
22respiratory system phenotypeMP:000538825.4LRP2, KL, KLF5, REL, RELB, KIF5A
23limbs/digits/tail phenotypeMP:000537123.1LRP5, KL, RECK, RELA, RELB, KIT
24adipose tissue phenotypeMP:000537520.2LRP1, KL, RETN, CNR1, SFRP1, RB1
25craniofacial phenotypeMP:000538219.8LRP2, LRP5, KIT, KITLG, NAGLU, LPAR1
26endocrine/exocrine gland phenotypeMP:000537919.6LRP2, LRP5, KL, KLF5, RELB, RBPJ
27other phenotypeMP:000539517.3SH2B3, KL, RECK, RELB, CNR1, SERPINH1
28hearing/vestibular/ear phenotypeMP:000537717.3LRP2, KIT, KITLG, RDX, RB1, NAGLU
29pigmentation phenotypeMP:000118612.0LRP5, KIT, KITLG, RB1, RBPJ, SEMA3C

Publications for genes affiliated with Rheumatoid Arthritis

Sources:
35PubMed
See all sources

Articles related to rheumatoid arthritis:

(show top 50)    (show all 4317)
idTitleAuthorsYearAffiliating Genes
1The PADI4 gene does not contribute to genetic suscept ibility to rheumatoid arthritis in Chinese Han population. (20563870)Chen R.... Sun S.2010PADI4
2Most common SNPs associated with rheumatoid arthritis in subjects of European ancestry confer risk of rheumatoid arthritis in Africa n-Americans. (20973039)Hughes L.B.... Bridges S.L.2010PTPRC, PRKCQ, IL2RA
3Osteopontin is associated with increased arterial sti ffness in rheumatoid arthritis. (19603104)Bazzichi L.... Bombardieri S.2009SPP1
4Rheumatoid arthritis-associated gene-gene interaction network for rheumatoid arthritis candidate genes. (20018070)Huang C.H.... Zheng T.2009TNFRSF1B, MIF, HLA-C
5The multi-faceted assessment of independence in patie nts with rheumatoid arthritis: preliminary validation from the ATTAIN study. (18402714)Hassett A.L.... Gignac M.A.2008TNF
6Pustular psoriasis following treatment of rheumatoid arthritis with TNF-alpha inhibitors. (19112764)Egnatios G.... Hood A.F.2008TNF
7The comparative one-year performance of anti-tumor necrosis factor alpha drugs in patients with rheumatoid arthritis, psoriatic arthritis, and ankylosing spondylitis: results from a longitudinal, observational, multicenter study. (18240258)Heiberg M.S.... Kvien T.K.2008TNF
8Genome-wide association study of rheumatoid arthritis in the Spanish population: KLF12 as a risk locus for rheumatoid arthritis susceptibility. (18668548)JuliA A.... Marsal S.2008PTPN22, HLA-DQA1, PTPRT
9Interleukin-1 promoter region polymorphism role in rheumatoid arthritis: a meta-analysis of IL-1B-511A/G variant reveals association with rheumatoid arthritis. (18838388)Harrison P.... Wordsworth B.P.2008IL1B, IL1A, HLA-DRB1
10MHC2TA promoter polymorphism (-168*G/A, rs3087456) is not associated with susceptibility to rheumatoid arthritis in British Caucasian rheumatoid arthritis patients. (16920747)Harrison P.... Wordsworth B.P.2007CIITA
11Association of DRB1 shared epitope genotypes with early mortality in rheumatoid arthritis: results of eighteen years of followup from the early rheumatoid arthritis study. (17469097)Mattey D.L.... Young A.2007HLA-DRB1
12Definition of adult-onset rheumatoid arthritis from e lderly-onset rheumatoid arthritis by studying T-lymphocyte subpopulations, thei r soluble receptors and soluble receptor of interleukin-2. (17953280)Coaccioli S.... PUXEDDU A.2007IL2
13Interleukin-18 induces angiogenic factors in rheumatoid arthritis synovial tissue fibroblasts via distinct signaling pathways. (17530707)Amin M.A.... Koch A.E.2007MAPK9, MAPK8, PRKCA
14Changes in biomarkers of inflammation and bone turnover and associations with clinical efficacy following infliximab plus methotrexate therapy in patients with early rheumatoid arthritis. (17552048)Visvanathan S.... Wagner C.2007MMP3
15Association of anti-cyclic citrullinated peptide antibody levels with PADI4 haplotypes in early rheumatoid arthritis and with shared epitope alleles in very late rheumatoid arthritis. (17469103)Cha S.... Bae S.C.2007HLA-DRB1, PADI4
16Up-regulation of metastasis-promoting S100A4 (Mts-1) in rheumatoid arthritis: putative involvement in the pathogenesis of rheumatoid arthritis. (17328050)Klingelhofer J.... Grigorian M.2007TP53, S100A4, S100A9
17Chaperonin 10 for rheumatoid arthritis. (17141696)Okamoto H.2006HSPE1
18Investigation of the MHC2TA gene, associated with rheumatoid arthritis in a Swedish population, in a UK rheumatoid arthritis cohort. (17075826)Eyre S.... Barton A.2006CIITA
19Investigation of the SLC22A4 gene (associated with rheumatoid arthritis in a Japanese population) in a United Kingdom population of rheumatoid arthritis patients. (15751072)Barton A.... Worthington J.2005SLC22A5, SLC22A4
20SLC22A4 polymorphisms implicated in rheumatoid arthritis and Crohn's disease are not associated with rheumatoid arthritis in a Canadian Caucasian population. (15693005)Newman B.... Siminovitch K.A.2005SLC22A4
21Evidence of radiographic benefit of treatment with in fliximab plus methotrexate in rheumatoid arthritis patients who had no clinical improvement: a detailed subanalysis of data from the anti-tumor necrosis facto r trial in rheumatoid arthritis with concomitant therapy study. (15818697)Smolen J.S.... Lipsky P.E.2005CRP
22Discrepancy between mRNA and protein expression of tumour suppressor maspin in synovial tissue may contribute to synovial hyperplasia in rheumatoid arthritis. (15361372)Schedel J.... Gay S.2004SERPINB5
23Reduced burden of disease and improved outcome of pat ients with rheumatoid factor positive rheumatoid arthritis compared with dropou ts. A 10 year observational study. (12926656)Darmawan J.... Nuralim H.2003CRP
24Current drug therapy for rheumatoid arthritis. (12665969)Kawai S.2003PTGS2, PTGES
25B cells and immunoglobulins dependent mechanisms in rheumatoid arthritis: a possible rationale of the extracorporeal immunomodulation for rheumatoid arthritis. (12164803)Matsumoto I.... Sumida T.2002GPI
26Cardiovascular risk in rheumatoid arthritis versus osteoarthritis: acute phase response related decreased insulin sensitivity and high-density lipoprotein cholesterol as well as clustering of metabolic syndrome features in rheumatoid arthritis. (12223108)Dessein P.H.... Joffe B.I.2002CRP
27Expression of extracellular matrix metalloproteinase inducer and enhancement of the production of matrix metalloproteinases in rheumatoid arthritis. (11840439)Tomita T.... Yoshikawa H.2002BSG
28Evidence that rheumatoid arthritis synovial T cells are similar to cytokine-activated T cells: involvement of phosphatidylinositol 3-kinase and nuclear factor kappaB pathways in tumor necrosis factor alpha production in rheumatoid arthritis. (11822409)Brennan F.M.... Feldmann M.2002TNF
29Treatment of rheumatoid arthritis patients with interleukin-1 receptor antagonist: radiologic assessment. (11357168)Watt I.... Cobby M.2001IL1R1
30Vascular endothelial growth factor levels in the serum and synovial fluid of patients with rheumatoid arthritis. (11407088)Lee S.S.... Kim H.Y.2001VEGFA, CRP, SRF
31The immunologic homunculus in rheumatoid arthritis. A new viewpoint of immunopathogenesis in rheumatoid arthritis and therapeutic c onsequences (11263010)BlAoss S.... Burmester G.R.2001CAST
32Genetic anticipation in rheumatoid arthritis in Europe. European Consortium on Rheumatoid Arthritis Families. (11361223)Radstake T.R.... van Riel P.L.2001HLA-DRA
33Activation of synovial fibroblasts in rheumatoid arthritis: lack of Expression of the tumour suppressor PTEN at sites of invasive growth and destruction. (11219390)Pap T.... Gay S.2000PTEN, PTPN3
34Association of MHC and rheumatoid arthritis. HLA-DR4 and rheumatoid arthritis: studies in mice and men. (11094431)Fugger L.... Svejgaard A.2000HLA-DRB1
35The increase of parathyroid hormone-related peptide and cytokine levels in synovial fluid of elderly rheumatoid arthritis and osteoarthritis. (10670749)Horiuchi T.... Ito H.1999PTHLH
36Establishment of nurse-like stromal cells from bone marrow of patients with rheumatoid arthritis: indication of characteristic bone marrow microenvironment in patients with rheumatoid arthritis. (10515647)Tomita T.... Ochi T.1999CSF3
37Pentosidine in synovial fluid in osteoarthritis and rheumatoid arthritis: relationship with disease activity in rheumatoid arthritis. (9858442)Chen J.R.... Inoue T.1998CRP
38Matrix metalloproteinase MMP-19 (RASI-1) is expressed on the surface of activated peripheral blood mononuclear cells and is detected as an autoantigen in rheumatoid arthritis. (9562866)Sedlacek R.... Krawinkel U.1998MMP19
39Synovium as a source of increased amino-terminal parathyroid hormone-related protein expression in rheumatoid arthritis. A possible role for locally produced parathyroid hormone-related protein in the pathogenesis of rheumatoid arthritis. (9525978)Funk J.L.... Yocum D.E.1998PTHLH
40Identification of cell types responsible for bone resorption in rheumatoid arthritis and juvenile rheumatoid arthritis. (9546355)Gravallese E.M.... Goldring S.R.1998CALCR, ACP5
41Day-to-day variation in iron status indexes is similar for most measures in elderly women with and without rheumatoid arthritis. (8613658)Lammi-Keefe C.J.... Haley N.R.1996TF
42HLA-DRB1 genes and disease severity in rheumatoid arthritis. The MIRA Trial Group. Minocycline in Rheumatoid Arthritis. (8912501)Reveille J.D.... Tilley B.1996HLA-DRB1
43Stromelysin-1 (MMP-3) level in the sera from patients with rheumatoid arthritis and other connective tissue diseases--clinical significances in early onset rheumatoid arthritis (7732485)Shingu M.... Nobunaga M.1995MMP3
44Rheumatoid factors from the peripheral blood of two patients with rheumatoid arthritis are genetically heterogeneous and somatically mutated. (7509350)Youngblood K.... Davidson A.1994OR6C4
45Studies of antibody to herpes simplex virus Fc gamma-binding protein gE in patients with rheumatoid arthritis, juvenile rheumatoid arthritis and normal controls. (1462119)Williams R.C.... Malone C.C.1992GYPC
46Properdin factor B and complement factor C4 allotypes in rheumatoid arthritis: results of a follow-up study. (1563983)van Zeben D.... Breedveld F.C.1992CFB
47Serum IL-2 level in rheumatoid arthritis: correlation with joint destruction and disease progression. (1756229)Tebib J.G.... Bouvier M.1991IL2
48Osteocalcin in rheumatoid arthritis--a marker for accelerated bone turnover in late-onset rheumatoid arthritis? (2060966)Marhoffer W.... Federlin K.1991BGLAP
49IL-6 gene polymorphism in rheumatoid arthritis, pauciarticular juvenile rheumatoid arthritis, systemic lupus erythematosus, and in healthy Danes. (2577114)Fugger L.... Svejgaard A.1989IL6
50A specific HLA-DP beta allele is associated with pauciarticular juvenile rheumatoid arthritis but not adult rheumatoid arthritis. (2512583)Begovich A.B.... Erlich H.A.1989HLA-DPB1

Expression for genes affiliated with Rheumatoid Arthritis

Sources:
1BioGPS
See all sources
Expression patterns in normal tissues for genes affiliated with Rheumatoid Arthritis

Pathways for genes affiliated with Rheumatoid Arthritis

Sources:
36QIAGEN, 20KEGG, 3Cell Signaling Technology, 37R&D Systems, 41Thomson Reuters, 10EMD Millipore
See all sources

Pathways related to rheumatoid arthritis according to GeneDecks:

(show top 50)    (show all 284)
idPathwayScoreTop Affiliating Genes
1Antioxidant Action of Vitamin-C3638.7NCF4, KIT, KITLG, BTK, VEGFB, VEGFC
2Akt Signaling3631.9PIK3CG, KIT, BTK, VEGFB, VEGFC, BMP2
3Transendothelial Migration of Leukocytes3626.1NCF4, RDX, BTK, VCAM1, MYO3A, RAP1A
4all-trans-Retinoic Acid Signaling in Brain3625.5BTK, BMP2, BMP4, BMP5, BMP6, BMP7
5Chemokine Signaling3622.7XCL1, JUN, JAK2, FOS, GRK5, IL8
6Jak-STAT signaling pathway2019.3PIK3CD, PIK3CG, CNTF, MYC, CLCF1, LEP
7Hematopoietic cell lineage2019.1KIT, KITLG, MS4A1, CD2, CD36, CD14
8TRAF Pathway3618.8MYD88, CHUK, UBC, JUN, FOS, IRAK1
9Pancreatic Adenocarcinoma3618.4KIT, KITLG, RB1, BRAF, VEGFB, VEGFC
10Natural killer cell mediated cytotoxicity2017.9PIK3CD, PIK3CG, SH2D1A, KIR2DS3, KIR2DL1, KIR2DL3
11Apoptosis and Autophagy317.6SERPINB5, MYC, BIRC5, PARP1, BCL2, BCL2L11
12Lymphocyte Signaling317.0SH2D1A, NCF4, KIT, KITLG, BTK, MYD88
13Paxillin Interactions3616.6KIT, KITLG, VEGFB, VEGFC, BMP2, BMP4
14T cell receptor signaling pathway2016.5PIK3CD, PIK3CG, PDCD1, RELA, CHUK, ZAP70
15Th17 Differentiation3716.4JAK1, JAK2, CD28, CD86, CD4, CD80
16Epithelial cell signaling in Helicobacter pylori infection2016.1RELA, RAC1, CHUK, ATP6V1G1, ATP6V1B1, ATP6V0D1
17Th1 Differentiation3716.1JUN, JAK1, JAK2, CD28, CD86, CD4
18Cytokine production by Th17 cells in CF4116.0REL, RELA, RELB, MYD88, CHUK, LBP
19NOD-like receptor signaling pathway2015.8RELA, CHUK, XIAP, MEFV, IL18, IL1B
20Allograft rejection2015.7CD28, CD86, CD40LG, CD80, CD40, GZMB
21Transcription NF-kB signaling pathway1015.7REL, RELA, RELB, MYD88, CHUK, LBP
22ERK5 Signaling3615.7SH2D2A, KIT, KITLG, VEGFB, VEGFC, MYC
23Immune response T cell receptor signaling pathway1015.5REL, RELA, RELB, RAC1, ZAP70, LCK
24TREM1 Pathway3615.5BRAF, MYD88, CHUK, BAX, JUN, FOS
25GnRH Signaling3615.5BRAF, RAC1, ATF2, JUN, ITGA1, ITGA2
26IP3 Pathway3615.3KITLG, BTK, VEGFB, VEGFC, BMP2, BMP4
27IL-21 Signaling and its Primary Biological Effects in Different Immune Cell Types3715.3GZMB, IL12B, IL17A, IL17F, IL1B, IL21
28Phagocytosis of Microbes3615.2VTN, RAC1, ITGA1, ITGA2, ITGA4, ITGA5
29Graft-versus-host disease2015.1KIR2DL1, KIR2DL3, KIR3DL1, KIR2DL2, CD28, CD86
30Colorectal Cancer Metastasis3615.0LRP5, BRAF, MYC, BIRC5, BAX, MSH6
31CREB Pathway3614.9KIT, KITLG, VEGFB, BMP2, BMP4, BMP5
32IL-4 Pathway3614.8BRAF, BCL2, JAK1, FCER2, IL4, IL4R
33ITK and TCR Signaling3614.7RAC1, ZAP70, LCK, LAT, ATF2, JUN
34Mucin expression in CF via TLRs, EGFR signaling pathways4114.6REL, RELA, RELB, MYD88, CHUK, CFTR
35Mucin expression in CF via IL-6, IL-17 signaling pathways4114.4REL, RELA, RELB, CHUK, CFTR, ATF2
36Actin-Based Motility by Rho Family GTPases3614.1BMP4, BMP5, BMP7, BDNF, ITGA4, ITGA6
37Immune response_Fc epsilon RI pathway4114.0PIK3CD, REL, RELA, RELB, BTK, RAC1
38Telomerase Components in Cell Signaling3614.0KIT, KITLG, RB1, VEGFB, VEGFC, MYC
39G-protein signaling N-RAS regulation pathway1013.9BRAF, RASGRF1, ZAP70, LCK, LAT, CD3G
40Immune response_Oncostatin M signaling via MAPK in human cells4113.7RAC1, ATF2, JUN, JUNB, JUND, JAK1
41Apoptosis and survival TNFR1 signaling pathway1013.6REL, RELA, RELB, BCL2, CHUK, BAX
42Tyrosine Kinases / Adaptors313.3SH2D1A, KIT, KITLG, BTK, VEGFB, VEGFC
43Development VEGF signaling and activation1013.3PIK3CD, REL, RELA, RELB, SELE, VCAM1
44Adipocytokine signaling pathway2013.3RELA, LEP, CHUK, MTOR, JAK2, CD36
45Fc epsilon RI signaling pathway2013.0PIK3CD, PIK3CG, BTK, RAC1, LAT, IL4
46TNF-Induced Apoptosis Implicating Sphingolipids3612.9BAX, FADD, MAPK8, MAP2K6, MAP2K3, MAP2K4
47Signal transduction_JNK pathway4112.9RAC1, ATF2, JUN, JUND, FASLG, FAS
48Development_VEGF signaling and activation4112.9REL, RELA, RELB, SELE, VEGFA, VCAM1
49Signal transduction_AKT signaling4111.7PIK3CD, REL, RELA, RELB, PCNA, MYC
50Development EGFR signaling pathway1011.2EREG, NFKBIE

Compounds for genes affiliated with Rheumatoid Arthritis

Sources:
32Novoseek , 9DrugBank, 18HMDB, 34PharmGKB, 42Tocris Bioscience
See all sources

Compounds related to rheumatoid arthritis according to GeneDecks:

(show top 50)    (show all 470)
idCompoundScoreTop Affiliating Genes
1atp32 40.8RFC1, PDE4A, RECK, WARS, KIT, KIR3DL1
2cholesterol32 9 18 9 43.8LRP1, LRP2, LRP5, RECK, RELN, RETN
3cyclic amp32 18 26.4PDE4A, REL, CNR1, CNR2, CNTF, SFTPD
4prednisolone32 9 9 26.7KITLG, VWF, SFTPD, SELL, SERPINA6, VIP
5glucose32 24.2PDE4A, CNTF, KIT, SETD2, VIPR1, BRAF
6heparan sulfate32 18 22.6LRP1, VTN, GC, SERPINC1, SERPINF2, SERPINE1
7agarose32 21.4KIT, KITLG, VWF, SFTPD, SERPINA7, SERPINA1
8fatty acid32 21.3LRP1, RECK, RETN, GC, SERPINA6, NAMPT
9hydrocortisone32 9 9 23.0KITLG, SERPINA6, VIM, BMP6, LIF, BGLAP
10gtp32 19.4RECK, CNR2, RDX, VIP, VIPR1, BRAF
11ionomycin32 18.9CNTN2, BTK, SETD2, SERPINA3, RAP1A, RAG1
12guanine32 9 18 9 20.7CNR1, CNTN2, VWF, SELE, SETD2, VIP
13imatinib32 34 9 9 20.7PIK3CG, KIT, KITLG, SELL, VIP, BRAF
14gp 13032 17.6RECK, CNTF, KIT, BTK, VIP, BMP4
15phosphatidylserine32 9 9 19.5RECK, VWF, SELE, VIM, LPL, RAC1
16formaldehyde32 18 18.5KIT, VWF, PCNA, RB1, SELE, SELL
17mannitol32 9 9 19.0SELP, NAGLU, VCAM1, CHKB, XDH, B2M
18chloroquine32 34 9 9 20.0KIT, VTN, SERPINC1, BMP6, CIITA, B2M
19okadaic acid32 42 17.8RELA, RB1, SERPINB2, VIM, MYC, MYB
20theophylline32 9 18 9 19.8PDE4A, SELL, SELP, LPL, MYC, CHGA
21copper32 18 17.7SERPINA6, SERPINA1, NAGLU, LPA, LIF, SCG5
2215-deoxy-delta-12,14-prostaglandin j232 16.6PIK3CG, SERPINE1, VEGFA, VCAM1, MYC, BMP6
23okt332 16.3SELE, VCAM1, BMP6, ZAP70, LCK, LBR
24sodium nitroprusside32 16.0PDE4A, VWF, PCNA, VIP, MYB, BMP6
25aprotinin32 9 9 17.9LRP1, LRP2, VWF, SELP, SERPINC1, SERPINF2
26purine32 18 16.8ZAP70, MUC1, LBR, MTHFR, MTR, MTHFD1
27polymyxin b32 15.6SELE, SERPINE1, VCAM1, BPI, LBP, P2RX7
28fenofibrate32 9 9 17.6RETN, SELE, SELP, SERPINE1, VIM, LPA
29polysulfone32 15.4VWF, SELL, SELP, VCAM1, BPI, LBP
30doxycycline32 9 9 17.3SCGB1A1, CD79A, CDK2, CD40LG, MMP1, MMP13
31opiate32 15.2SAG, MME, GUSB, GRP, FAS, CCR5
32xanthine32 18 16.2PDE4A, NAT2, XDH, MPG, MPO, CD14
33egcg32 14.9PIK3CG, CHUK, XIAP, CDK6, CDK2, IL1A
34fitc32 14.6VWF, PCNA, SELL, BIRC5, ZAP70, LBP
35prostaglandin f2alpha32 14.6PDE4A, SERPINE1, VIP, LPL, UCN, SAA4
36pertussis32 14.0PIK3CG, VIP, LPAR1, JUN, ITGA4, ITGAL
37vinblastine32 9 9 16.0VIM, BIRC5, BDNF, KDR, BCL2, BAX
38adpribose32 14.0PIK3CG, PCNA, RB1, BIRC5, PARP1, BAK1
39glucosamine32 9 18 9 16.9SELL, SERPINC1, LPL, CD36, CD40, MMP13
40ltc432 13.8RECK, VIP, ITGB2, IL13, IL3, IL5
41sodium arsenite32 13.7SERPINH1, MYC, LBR, CFLAR, JUN, GSR
42resveratrol32 9 18 9 16.7PIK3CG, PCNA, RB1, BSG, VEGFA, VDR
43sp 60012532 42 14.2PIK3CG, VCAM1, CDKN1A, CD40, MMP1, MMP13
44marimastat32 42 9 9 16.1VEGFA, KDR, MMP1, MMP10, MMP11, MMP12
45vincristine32 34 9 9 15.9RECK, KIT, BTK, ITGA4, FGF2, ANXA5
46ndga32 12.9VCAM1, JUN, MMP13, MMP3, FOS, IL1B
47ketoconazole32 42 9 18 9 16.6SERPINA6, AR, GSR, IL1A, AOX1, ALOX5
48oxaliplatin32 34 9 9 15.3VEGFA, BIRC5, MTHFR, XRCC1, SAT1, XIAP
49staurosporin32 11.9PIK3CG, BCL2, JUN, CDKN3, ITGAL, IL8
50flavopiridol32 9 9 12.9PIK3CG, KIT, RB1, VEGFA, BIRC5, PARP1

GO Terms for genes affiliated with Rheumatoid Arthritis

Sources:
12Gene Ontology
See all sources

Cellular components related to rheumatoid arthritis according to GeneDecks:

(show all 14)
idNameGO IDScoreTop Affiliating Genes
1plasma membraneGO:00588662.2PIK3CD, PIK3CG, LRP2, LRP5, KL, PDCD1
2extracellular regionGO:00557655.5KL, PDCD1LG2, RETN, KITLG, VWF, VTN
3extracellular spaceGO:00561554.0LRP2, KL, RELN, CNTF, KIT, KITLG
4cytoplasmGO:00573747.2PIP4K2C, PIK3CG, PIN1, LRP1, SH2D1A, SH2D2A
5cytosolGO:00582942.3PIK3CD, PIK3CG, SH2B3, NDEL1, NCF4, PDE4A
6integral to plasma membraneGO:00588739.1LRP1, KL, CNR1, CNR2, CNTN2, KIR2DS3
7external side of plasma membraneGO:00989725.2KIT, VWF, BTLA, SELL, SELP, SEMA7A
8cell surfaceGO:00998623.0CNTN2, SFRP1, BST2, VEGFA, LPAR1, LPL
9membraneGO:01602021.7PIP4K2C, PIK3CG, NCF4, PDE4A, RECK, KIAA1109
10proteinaceous extracellular matrixGO:00557817.4RELN, VWF, SFRP1, SERPINA1, VEGFA, BMP4
11extracellular matrixGO:03101215.8VWF, VTN, SFRP1, SERPINE1, LPL, RARRES2
12endosome membraneGO:01000815.5MYD88, UBC, ATP6V0D1, ATP6V0E2, ATP6V0A4, ATP6V0E1
13membrane raftGO:04512115.4BTK, SELE, BSG, BST2, LCK, LAT
14platelet alpha granule lumenGO:03109314.0VWF, SERPINF2, SERPINA1, SERPINE1, VEGFA, VEGFB

Biological processes related to rheumatoid arthritis according to GeneDecks:

(show top 50)    (show all 84)
idNameGO IDScoreTop Affiliating Genes
1inflammatory responseGO:00695435.5PIK3CD, PIK3CG, RELA, CNR2, KIT, SELE
2innate immune responseGO:04508727.2PIK3CD, PIK3CG, PIN1, RELA, SFTPD, BTK
3apoptotic processGO:00691524.4PDCD1, PDCD5, BTK, RBM5, VIM, BOK
4cell-cell signalingGO:00726724.3SH2D1A, BST2, NAMPT, BMP2, CHST4, S100A9
5positive regulation of transcription from RNA polymerase II promoterGO:04594424.2LRP5, KLF12, RELA, RB1, RBPJ, SERPINF2
6blood coagulationGO:00759623.1PIK3CG, SH2B3, KIF5A, VWF, SELL, SELP
7proteolysisGO:00650822.3RELN, CNDP2, SENP1, LPA, LAP3, QPCT
8positive regulation of cell proliferationGO:00828421.1LRP5, KLF5, CNTF, KIT, SFRP1, VIP
9chemotaxisGO:00693521.0LECT2, S100A8, S100A9, FPR2, FGF2, IL4
10response to drugGO:04249319.9LRP2, PDE4A, SFRP1, SEMA3C, SERPINA7, VEGFC
11response to lipopolysaccharideGO:03249619.5CNR1, CNR2, SELE, SELP, SERPINA1, LBP
12response to hypoxiaGO:00166619.3SERPINA1, VEGFA, VCAM1, BMP2, BCL2, LEP
13positive regulation of I-kappaB kinase/NF-kappaB cascadeGO:04312319.0REL, RELA, BST2, LPAR1, MYD88, PARK2
14anti-apoptosisGO:00691619.0RELA, SERPINB2, BRAF, VEGFB, MYD88, BIRC5
15negative regulation of cell proliferationGO:00828517.9WARS, SFRP1, RBM5, VDR, BMP2, BMP4
16negative regulation of apoptotic processGO:04306617.9PIK3CG, RELA, SFRP1, SERPINE1, BRAF, VEGFA
17positive regulation of apoptotic processGO:04306517.9CNR1, SFRP1, RBM5, LPAR1, BMP2, BMP4
18angiogenesisGO:00152517.5PIK3CG, SH2D2A, KLF5, WARS, SETD2, SERPINE1
19positive regulation of NF-kappaB transcription factor activityGO:05109217.2RELA, BTK, MYD88, CLU, CHUK, UBC
20agingGO:00756816.6LRP2, KL, CNR1, SERPINA7, VDR, VCAM1
21T cell costimulationGO:03129516.5PDCD1, PDCD1LG2, BTLA, RAC1, LCK, MTOR
22response to virusGO:00961516.3BST2, MYD88, LILRB1, CLU, CHUK, XCL1
23induction of apoptosisGO:00691716.1PDCD5, BOK, BCL2L11, BBC3, LCK, BAX
24Toll signaling pathwayGO:00806316.1RELA, BTK, MYD88, CHUK, UBC, LBP
25insulin receptor signaling pathwayGO:00828615.8KL, NAMPT, MTOR, ATP6V1G1, ATP6V1B1, ATP6V0D1
26interferon-gamma-mediated signaling pathwayGO:06033315.8VCAM1, CIITA, B2M, JAK1, JAK2, CD44
27cellular component movementGO:00692815.5SERPINB5, VNN2, VIM, RAC1, SCG2, CHST4
28positive regulation of cell migrationGO:03033515.2VEGFA, BMP2, KDR, JAK2, CDH13, ITGAV
29positive regulation of angiogenesisGO:04576615.2SERPINE1, VEGFA, RAMP2, KDR, CHI3L1, CHRNA7
30activation of MAPK activityGO:00018715.1KIT, LPAR1, LPAR3, CHRNA7, UBC, P2RX7
31response to organic cyclic compoundGO:01407015.1SFRP1, SELP, SERPINA1, BMP4, BAK1, P2RX7
32cellular iron ion homeostasisGO:00687915.1MYC, ATP6V1G1, ATP6V1B1, ATP6V0D1, ATP6V1C2, ATP6V0E2
33toll-like receptor 2 signaling pathwayGO:03413415.1RELA, BTK, MYD88, CHUK, UBC, ATF2
34toll-like receptor 1 signaling pathwayGO:03413014.9RELA, BTK, MYD88, CHUK, UBC, ATF2
35cellular response to lipopolysaccharideGO:07122214.8SERPINE1, LILRB1, LBP, AXL, CD36, CD14
36response to ethanolGO:04547114.7CNR1, BGLAP, BCL2, BAK1, S100A8, S100A9
37MyD88-independent toll-like receptor signaling pathwayGO:00275614.7RELA, CHUK, UBC, ATF2, JUN, FOS
38positive regulation of ERK1 and ERK2 cascadeGO:07037414.7SEMA7A, SERPINF2, BRAF, VEGFB, BMP2, BMP4
39positive regulation of tumor necrosis factor productionGO:03276014.7MYD88, CLEC7A, LBP, JAK2, CD36, CD14
40negative regulation of inflammatory responseGO:05072814.5CNR2, SERPINC1, ZFP36, SAA1, CD276, MEFV
41interaction with hostGO:05170114.5NCF4, ATP6V1G1, ATP6V1B1, ATP6V0D1, ATP6V1C2, ATP6V0E2
42cellular response to mechanical stimulusGO:07126014.5MYD88, BAK1, CD40, ITGB1, IL13, IL18
43positive regulation of interleukin-6 productionGO:03275514.4MYD88, UCN, LBP, P2RX7, CD36, FIGF
44phagosome maturationGO:09038214.4NCF4, ATP6V1G1, ATP6V1B1, ATP6V0D1, ATP6V1C2, ATP6V0E2
45transferrin transportGO:03357214.1ATP6V1G1, ATP6V1B1, ATP6V0D1, ATP6V1C2, ATP6V0E2, ATP6V0A4
46activation of cysteine-type endopeptidase activity involved in apoptotic processGO:00691914.1SENP1, BOK, MYC, BCL2L11, BBC3, LCK
47positive regulation of protein kinase B signaling cascadeGO:05189713.8PIK3CG, VEGFB, CHI3L1, MTOR, AXL, MST1R
48response to estradiol stimulusGO:03235513.5GC, SERPINA1, VDR, BMP4, UCN, MMP15
49positive regulation of MAPK cascadeGO:04341013.4CNTF, KIT, LPAR1, LPAR3, LIF, KDR
50positive regulation of smooth muscle cell proliferationGO:04866113.2SERPINF2, MYD88, BMP4, JUN, CDH13, IRAK4

Molecular functions related to rheumatoid arthritis according to GeneDecks:

(show all 13)
idNameGO IDScoreTop Affiliating Genes
1protein bindingGO:00551582.5PIK3CD, PIK3CG, PIN1, LRP1, LRP2, LRP5
2cytokine activityGO:00512524.5CNTF, KITLG, NAMPT, VEGFA, BMP2, BMP4
3protein homodimerization activityGO:04280324.1KIT, VWF, SERPINF2, BST2, VEGFA, VEGFB
4receptor bindingGO:00510220.9SERPINE1, LPL, BMP2, RARRES2, LIF, CLCF1
5receptor activityGO:00487219.1LRP1, KIR2DL1, KIR2DL3, BTLA, SEMA3C, SEMA7A
6growth factor activityGO:00808318.2CNTF, KITLG, VEGFA, VEGFB, VEGFC, BMP2
7heparin bindingGO:00820117.9VTN, SFRP1, SELL, SELP, SERPINC1, VEGFA
8chemokine activityGO:00800917.0XCL1, IL8, CCL8, CCL4, CCL15, CCL7
9transmembrane signaling receptor activityGO:00488815.9KIR2DS2, KIR2DS1, SELE, CLEC4A, CD79A, CD27
10protein heterodimerization activityGO:04698215.7BRAF, VEGFA, VEGFB, BOK, MYC, BMP2
11identical protein bindingGO:04280215.7PIP4K2C, RELA, CNTN2, SFRP1, PCNA, BTK
12tumor necrosis factor receptor bindingGO:00516413.5CD70, CD40LG, FASLG, FADD, CASP8, TRAF2
13protease bindingGO:00202012.5KIT, VWF, SELL, SERPINC1, SERPINF2, SERPINA1

Sources for Rheumatoid Arthritis

2CDC
11FMA
18HMDB
19ICD9CM
20KEGG
24MeSH
25MGI
27NCIt
28NDF-RT
31NINDS
32Novoseek
33OMIM
35PubMed
36QIAGEN
43UMLS