Sources: 12Gene Ontology See all sources |
Cellular components related to squamous cell carcinoma according to GeneDecks: (show all 14)
| id | Name | GO ID | Score | Top Affiliating Genes | | 1 | integral to plasma membrane | GO:005887 | INF | LRP12, SGCB, LPAR3, CLCA4, CLDN4, CLDN1 | | 2 | nucleus | GO:005634 | INF | ZNF510, ZNF410, ZNF124, ZNF254, ZNF639, PIK3C2B | | 3 | cytosol | GO:005829 | INF | PIK3CA, PIK3C2B, PIK3C2A, PIK3CG, PDCD4, PDE3A | | 4 | extracellular region | GO:005576 | 45.9 | NCAM1, PDCD1LG2, RETN, KISS1, VTN, SERPINE2 | | 5 | nucleoplasm | GO:005654 | 42.4 | PIN1, RFC1, RFC5, NCOA1, NCOA3, NCOR1 | | 6 | cell surface | GO:009986 | 25.8 | NCAM1, KISS1R, SFRP1, VEGFA, VCAM1, BMP2 | | 7 | external side of plasma membrane | GO:009897 | 19.6 | NCAM1, KIT, VCAM1, KDR, B2M, CD28 | | 8 | extracellular matrix | GO:031012 | 17.8 | VTN, SFRP1, SFRP2, SERPINE2, SERPINF1, SERPINE1 | | 9 | membrane raft | GO:045121 | 16.4 | SELE, BSG, BCL10, LCK, LAT, FURIN | | 10 | nucleolus | GO:005730 | INF | NCOA3, PDCD4, RERE, VRK1, PCNA, RBL2 | | 11 | plasma membrane | GO:005886 | INF | PIK3C2B, PIK3C2A, PIK3CG, PIM1, NCAM1, PDCD1 | | 12 | extracellular space | GO:005615 | INF | KIT, VTN, SFN, SFRP1, SFRP2, SFRP5 | | 13 | cytoplasm | GO:005737 | INF | PIDD, PIK3C2A, PIK3CG, PIN1, PIM1, KLF6 | | 14 | transcription factor complex | GO:005667 | INF | KLF4, RELA, RBL2, LMO4, RARG, CLOCK |
Biological processes related to squamous cell carcinoma according to GeneDecks: (show top 50)
(show all 81)
| id | Name | GO ID | Score | Top Affiliating Genes | | 1 | protein phosphorylation | GO:006468 | INF | PIM1, VRK1, BRAF, RARA, RAF1, BIRC5 | | 2 | negative regulation of transcription from RNA polymerase II promoter | GO:000122 | INF | ZNF254, KLF4, NCOR1, VHL, VDR, MYC | | 3 | signal transduction | GO:007165 | 39.2 | PIDD, LRP12, PDCD1, KIT, SFN, SFRP5 | | 4 | apoptotic process | GO:006915 | 37.7 | PIDD, PIM1, PDCD1, PDCD4, SFN, SFRP5 | | 5 | positive regulation of cell proliferation | GO:008284 | 28.9 | KIT, SFRP1, SFRP2, NBN, VEGFA, VEGFC | | 6 | blood coagulation | GO:007596 | 27.9 | PIK3CA, PIK3CG, PDE3A, PDE3B, KIF15, KIF22 | | 7 | cell proliferation | GO:008283 | 25.8 | PIM1, KIF15, SFN, PCNA, BUB1B, NBN | | 8 | response to drug | GO:042493 | 25.4 | PDE3A, SFRP1, SFRP2, NBN, VEGFC, MYC | | 9 | cell adhesion | GO:007155 | 24.8 | NCAM1, VTN, VCAM1, VCAN, VCL, MYBPC1 | | 10 | virus-host interaction | GO:019048 | 24.3 | RELA, BTRC, RB1, RBL1, VIM, VDAC1 | | 11 | negative regulation of transcription, DNA-dependent | GO:045892 | 24.3 | ZNF639, KLF4, PDCD4, RELA, SFRP1, SFRP2 | | 12 | inflammatory response | GO:006954 | 23.4 | PIK3CG, RELA, KIT, SELE, MYD88, BMP2 | | 13 | anti-apoptosis | GO:006916 | 23.0 | PIK3CA, RELA, SERPINB2, BRAF, VHL, VEGFB | | 14 | innate immune response | GO:045087 | 21.9 | PIK3CG, PIN1, RELA, MYD88, CLU, BCL10 | | 15 | positive regulation of apoptotic process | GO:043065 | 20.9 | NCOA1, SFRP1, SFRP2, BMP2, BMP4, RARG | | 16 | response to hypoxia | GO:001666 | 20.6 | SFTPB, VEGFA, VCAM1, BMP2, RAF1, LIMD1 | | 17 | platelet activation | GO:030168 | 20.3 | PIK3CA, PIK3CG, SERPINF2, SERPINE1, VEGFA, VEGFB | | 18 | induction of apoptosis | GO:006917 | 19.8 | ZMAT3, BCL10, BCL2L11, LCK, BAD, BAX | | 19 | cell-cell signaling | GO:007267 | 19.5 | SFRP2, BMP2, S100A9, CGB, CD86, CD80 | | 20 | nerve growth factor receptor signaling pathway | GO:048011 | 19.1 | PIK3CA, RELA, BRAF, VAV2, MYD88, RAP1A | | 21 | positive regulation of cell migration | GO:030335 | 19.0 | VEGFA, BMP2, KDR, FURIN, JAK2, CDH13 | | 22 | cell surface receptor signaling pathway | GO:007166 | 18.6 | BSG, MYD88, BIRC2, BIRC3, KHDRBS1, BDKRB2 | | 23 | epidermal growth factor receptor signaling pathway | GO:007173 | 17.6 | PIK3CA, PIK3C2A, RAF1, CHUK, UBC, BAD | | 24 | response to organic cyclic compound | GO:014070 | 17.5 | SFRP1, BMP4, BAK1, MSH2, JUN, CDKN1A | | 25 | transforming growth factor beta receptor signaling pathway | GO:007179 | 17.4 | NCOR1, RBL1, SERPINE1, MYC, ZFYVE9, PARP1 | | 26 | heart development | GO:007507 | 17.2 | PCNA, RBP4, VCAM1, VCAN, BMP2, RAF1 | | 27 | positive regulation of I-kappaB kinase/NF-kappaB cascade | GO:043123 | 16.9 | RELA, MYD88, BIRC2, BIRC3, BCL10, LGALS1 | | 28 | platelet degranulation | GO:002576 | 16.8 | SERPINF2, SERPINE1, VEGFA, VEGFB, VEGFC, VCL | | 29 | insulin receptor signaling pathway | GO:008286 | 16.8 | PIK3CA, PIK3C2A, PDE3B, RAF1, MTOR, ATP6V1C1 | | 30 | positive regulation of ERK1 and ERK2 cascade | GO:070374 | 16.7 | SERPINF2, BRAF, VEGFB, BMP2, BMP4, KDR | | 31 | positive regulation of gene expression | GO:010628 | 16.7 | NCOA3, KIT, BRAF, VEGFA, VDR, BMP2 | | 32 | positive regulation of protein phosphorylation | GO:001934 | 16.5 | PIN1, VEGFA, BMP2, BMP4, MT3, MTOR | | 33 | cell migration | GO:016477 | 16.4 | VAV2, LIMD1, PAK4, BDKRB1, LAMA5, CEACAM1 | | 34 | response to ethanol | GO:045471 | 16.2 | RBP4, BGLAP, BCL2, BAK1, S100A8, S100A9 | | 35 | positive regulation of angiogenesis | GO:045766 | 16.0 | SFRP2, SERPINE1, VEGFA, KDR, CHI3L1, MTDH | | 36 | leukocyte migration | GO:050900 | 15.7 | PIK3CA, BSG, LCK, YES1, L1CAM, MSN | | 37 | induction of apoptosis by intracellular signals | GO:008629 | 15.6 | MYC, BMF, CLU, BCL2, BCL2L1, BCL2L11 | | 38 | cellular response to hypoxia | GO:071456 | 15.6 | SFRP1, VHL, VEGFA, LMNA, BMP7, BDKRB2 | | 39 | activation of cysteine-type endopeptidase activity involved in apoptotic process | GO:006919 | 15.5 | VCP, MYC, BCL2L11, LCK, BAD, BAX | | 40 | aging | GO:007568 | 15.5 | SERPINF1, VDR, VCAM1, BAK1, FURIN, JUN | | 41 | keratinocyte differentiation | GO:030216 | 15.2 | SFN, SCEL, YAP1, LATS2, S100A7, JAG1 | | 42 | positive regulation of MAPK cascade | GO:043410 | 15.1 | KIT, LPAR3, KDR, LEP, CD36, CDH2 | | 43 | positive regulation of peptidyl-tyrosine phosphorylation | GO:050731 | 15.1 | VTN, VEGFA, VEGFB, MTOR, JAK2, CD36 | | 44 | wound healing | GO:042060 | 15.0 | KLF6, RAF1, PAK1, SDC2, S100A8, FGF10 | | 45 | positive regulation of cell division | GO:051781 | 14.9 | VEGFA, VEGFB, VEGFC, YBX1, FIGF, FGF1 | | 46 | positive regulation of protein kinase B signaling cascade | GO:051897 | 14.8 | PIK3CG, VEGFB, CHI3L1, MTDH, MTOR, AXL | | 47 | angiogenesis | GO:001525 | INF | PIK3CA, PIK3CG, PDE3B, WASF2, SETD2, SERPINE1 | | 48 | negative regulation of apoptotic process | GO:043066 | INF | PIDD, PIK3CG, PIM1, PDE3A, RELA, SFRP1 | | 49 | negative regulation of cell proliferation | GO:008285 | INF | KLF4, KISS1R, SFN, SFRP1, SFRP2, SFRP5 | | 50 | cytokine-mediated signaling pathway | GO:019221 | INF | PIN1, KLF6, NCAM1, RELA, KIT, VCAM1 |
Molecular functions related to squamous cell carcinoma according to GeneDecks: (show all 16)
| id | Name | GO ID | Score | Top Affiliating Genes | | 1 | protein binding | GO:005515 | INF | ZNF639, PIK3CA, PIK3C2B, PIDD, PIK3CG, PIN1 | | 2 | ATP binding | GO:005524 | INF | PIK3CA, PIK3C2B, PIK3C2A, PIK3CG, PIM1, RFC1 | | 3 | identical protein binding | GO:042802 | 22.7 | RELA, SFRP1, PCNA, VIM, VCP, MYD88 | | 4 | protein kinase binding | GO:019901 | 21.4 | RELA, VIM, PAK1, BCL10, BCL2L1, BCL2L14 | | 5 | enzyme binding | GO:019899 | 21.1 | RFC5, NCOA1, VHL, RARA, RAC1, BLZF1 | | 6 | transcription factor binding | GO:008134 | 20.5 | PIM1, RELA, RB1, RBL1, NBN, VHL | | 7 | growth factor activity | GO:008083 | 19.1 | VEGFA, VEGFB, VEGFC, BMP2, BMP4, BMP6 | | 8 | signal transducer activity | GO:004871 | 17.1 | NCOA1, NCOA3, PDCD1, VOPP1, CLOCK, LGALS1 | | 9 | cytokine activity | GO:005125 | 16.8 | VEGFA, BMP2, BMP4, BMP6, BMP7, MIF | | 10 | heparin binding | GO:008201 | 15.7 | VTN, SFRP1, SERPINE2, VEGFA, VEGFB, BMP4 | | 11 | sequence-specific DNA binding | GO:043565 | INF | RERE, NANOG, VDR, MYC, RARG, RARA | | 12 | sequence-specific DNA binding transcription factor activity | GO:003700 | INF | ZNF639, KLF4, KLF6, RELA, RERE, RB1 | | 13 | transcription regulatory region DNA binding | GO:044212 | INF | ZNF639, KLF4, NCOR1, RELA, CIITA, YAP1 | | 14 | protein homodimerization activity | GO:042803 | INF | KIT, SERPINF2, VEGFA, VEGFB, BMP2, BMP4 | | 15 | receptor binding | GO:005102 | INF | SERPINE2, SERPINE1, VCP, BMP2, RARA, RARRES2 | | 16 | protein heterodimerization activity | GO:046982 | INF | BRAF, VEGFA, VEGFB, MYC, BMP2, BMP6 |
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