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PGD
MCID: 46X053
MIFTS: 29

46,xy Gonadal Dysgenesis, Partial, with Minifascicular Neuropathy (PGD)

Categories: Endocrine diseases, Fetal diseases, Genetic diseases, Neuronal diseases, Rare diseases, Reproductive diseases
Genes Variations Tissues Related diseases Symptoms & Phenotypes
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Aliases & Classifications for 46,xy Gonadal Dysgenesis, Partial, with Minifascicular...

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MalaCards integrated aliases for 46,xy Gonadal Dysgenesis, Partial, with Minifascicular Neuropathy:

Name: 46,xy Gonadal Dysgenesis, Partial, with Minifascicular Neuropathy 58 30 6 41
46xy Partial Gonadal Dysgenesis, with Minifascicular Neuropathy 58 13
Partial Gonadal Dysgenesis with Minifascicular Neuropathy 46,xy 76
46,xy Gonadal Dysgenesis-Motor and Sensory Neuropathy Syndrome 60
Pgd 76

Characteristics:

Orphanet epidemiological data:

60
46,xy gonadal dysgenesis-motor and sensory neuropathy syndrome
Inheritance: Autosomal recessive; Prevalence: <1/1000000 (Worldwide);

Classifications:

MalaCards categories:
Global: Genetic diseases Fetal diseases Rare diseases
Anatomical: Reproductive diseases Endocrine diseases Neuronal diseases
See all MalaCards categories (disease lists)
ICD10: 35
Orphanet: 60  
Rare gynaecological and obstetric diseases
Rare endocrine diseases
Developmental anomalies during embryogenesis


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Summaries for 46,xy Gonadal Dysgenesis, Partial, with Minifascicular...

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UniProtKB/Swiss-Prot : 76 Partial gonadal dysgenesis with minifascicular neuropathy 46,XY: Characterized by the presence of a testis on one side and a streak or an absent gonad at the other, persistence of Muellerian duct structures, and a variable degree of genital ambiguity.

MalaCards based summary : 46,xy Gonadal Dysgenesis, Partial, with Minifascicular Neuropathy, also known as 46xy partial gonadal dysgenesis, with minifascicular neuropathy, is related to cutaneous leishmaniasis and visceral leishmaniasis. An important gene associated with 46,xy Gonadal Dysgenesis, Partial, with Minifascicular Neuropathy is DHH (Desert Hedgehog Signaling Molecule). Affiliated tissues include testis, ovary and skeletal muscle, and related phenotypes are abnormality of peripheral nerve conduction and skeletal muscle atrophy

Description from OMIM: 607080
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Related Diseases for 46,xy Gonadal Dysgenesis, Partial, with Minifascicular...

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Diseases related to 46,xy Gonadal Dysgenesis, Partial, with Minifascicular Neuropathy via text searches within MalaCards or GeneCards Suite gene sharing:

(show top 50) (show all 70)
# Related Disease Score Top Affiliating Genes
1 cutaneous leishmaniasis 11.3
2 visceral leishmaniasis 11.3
3 sleeping sickness 11.3
4 glucosephosphate dehydrogenase deficiency 11.3
5 6-phosphogluconolactonase deficiency 11.2
6 leishmaniasis 11.2
7 6-phosphogluconate dehydrogenase deficiency 11.2
8 46,xy partial gonadal dysgenesis 11.1
9 fragile x syndrome 10.1
10 myotonic dystrophy 10.1
11 myotonia atrophica 10.1
12 myotonic dystrophy 1 10.0
13 cystic fibrosis 10.0
14 muscular dystrophy, duchenne type 10.0
15 spinal muscular atrophy 10.0
16 muscular atrophy 10.0
17 muscular dystrophy 10.0
18 breast cancer 9.8
19 diabetes mellitus, noninsulin-dependent 9.8
20 factor viii deficiency 9.8
21 holt-oram syndrome 9.8
22 marfan syndrome 9.8
23 ovarian cancer 9.8
24 spinocerebellar ataxia 2 9.8
25 down syndrome 9.8
26 chondrodysplasia punctata syndrome 9.8
27 netherton syndrome 9.8
28 ceroid lipofuscinosis, neuronal, 1 9.8
29 body mass index quantitative trait locus 11 9.8
30 hemophilia a 9.8
31 heterotaxy, visceral, 1, x-linked 9.8
32 incontinentia pigmenti 9.8
33 mucopolysaccharidosis, type ii 9.8
34 brittle bone disorder 9.8
35 cervical cancer 9.8
36 body mass index quantitative trait locus 10 9.8
37 body mass index quantitative trait locus 14 9.8
38 body mass index quantitative trait locus 18 9.8
39 lymphatic malformation 7 9.8
40 body mass index quantitative trait locus 19 9.8
41 glycogen storage disease 9.8
42 familial adenomatous polyposis 9.8
43 nonsyndromic deafness 9.8
44 recessive dystrophic epidermolysis bullosa 9.8
45 polycystic kidney disease 9.8
46 hypogonadotropic hypogonadism 9.8
47 open-angle glaucoma 9.8
48 coronary artery vasospasm 9.8
49 autosomal dominant cerebellar ataxia 9.8
50 gonadal dysgenesis 9.8

Graphical network of the top 20 diseases related to 46,xy Gonadal Dysgenesis, Partial, with Minifascicular Neuropathy:



Diseases related to 46,xy Gonadal Dysgenesis, Partial, with Minifascicular Neuropathy
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Symptoms & Phenotypes for 46,xy Gonadal Dysgenesis, Partial, with Minifascicular...

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Human phenotypes related to 46,xy Gonadal Dysgenesis, Partial, with Minifascicular Neuropathy:

60 33 (show all 29)
# Description HPO Frequency Orphanet Frequency HPO Source Accession
1 abnormality of peripheral nerve conduction 60 33 hallmark (90%) Very frequent (99-80%) HP:0003134
2 skeletal muscle atrophy 60 33 hallmark (90%) Very frequent (99-80%) HP:0003202
3 increased circulating gonadotropin level 60 33 hallmark (90%) Very frequent (99-80%) HP:0000837
4 primary amenorrhea 60 33 hallmark (90%) Very frequent (99-80%) HP:0000786
5 reduced tendon reflexes 60 33 hallmark (90%) Very frequent (99-80%) HP:0001315
6 male hypogonadism 60 33 hallmark (90%) Very frequent (99-80%) HP:0000026
7 decreased serum testosterone level 60 33 hallmark (90%) Very frequent (99-80%) HP:0040171
8 infertility 60 33 hallmark (90%) Very frequent (99-80%) HP:0000789
9 sensorimotor neuropathy 60 33 hallmark (90%) Very frequent (99-80%) HP:0007141
10 abnormality of female external genitalia 60 33 hallmark (90%) Very frequent (99-80%) HP:0000055
11 hypoplasia of the uterus 60 33 hallmark (90%) Very frequent (99-80%) HP:0000013
12 polyneuropathy 60 33 hallmark (90%) Very frequent (99-80%) HP:0001271
13 distal muscle weakness 60 33 hallmark (90%) Very frequent (99-80%) HP:0002460
14 abnormal peripheral myelination 60 33 hallmark (90%) Very frequent (99-80%) HP:0003130
15 sensory ataxic neuropathy 60 33 hallmark (90%) Very frequent (99-80%) HP:0003434
16 distal sensory loss of all modalities 60 33 hallmark (90%) Very frequent (99-80%) HP:0006984
17 decreased serum estradiol 60 33 hallmark (90%) Very frequent (99-80%) HP:0008214
18 testicular dysgenesis 60 33 hallmark (90%) Very frequent (99-80%) HP:0008715
19 gonadal dysgenesis with female appearance, male 60 33 hallmark (90%) Very frequent (99-80%) HP:0008723
20 streak ovary 60 33 hallmark (90%) Very frequent (99-80%) HP:0010464
21 abnormal vagina morphology 33 hallmark (90%) HP:0000142
22 gonadoblastoma 60 33 occasional (7.5%) Occasional (29-5%) HP:0000150
23 pes cavus 60 33 occasional (7.5%) Occasional (29-5%) HP:0001761
24 steppage gait 60 33 occasional (7.5%) Occasional (29-5%) HP:0003376
25 gonadal dysgenesis 60 33 Very frequent (99-80%) HP:0000133
26 abnormality of the vagina 60 Very frequent (99-80%)
27 abnormality of peripheral nerves 60 Very frequent (99-80%)
28 gonadal dysgenesis, male 33 HP:0008668
29 decreased number of peripheral myelinated nerve fibers 33 HP:0003380

Clinical features from OMIM:

607080
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Drugs & Therapeutics for 46,xy Gonadal Dysgenesis, Partial, with Minifascicular...

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Search Clinical Trials , NIH Clinical Center for 46,xy Gonadal Dysgenesis, Partial, with Minifascicular Neuropathy

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Genetic Tests for 46,xy Gonadal Dysgenesis, Partial, with Minifascicular...

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Genetic tests related to 46,xy Gonadal Dysgenesis, Partial, with Minifascicular Neuropathy:

# Genetic test Affiliating Genes
1 46,xy Gonadal Dysgenesis, Partial, with Minifascicular Neuropathy 30 DHH
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Anatomical Context for 46,xy Gonadal Dysgenesis, Partial, with Minifascicular...

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MalaCards organs/tissues related to 46,xy Gonadal Dysgenesis, Partial, with Minifascicular Neuropathy:

42
Testis, Ovary, Skeletal Muscle, Uterus
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Publications for 46,xy Gonadal Dysgenesis, Partial, with Minifascicular...

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Variations for 46,xy Gonadal Dysgenesis, Partial, with Minifascicular...

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ClinVar genetic disease variations for 46,xy Gonadal Dysgenesis, Partial, with Minifascicular Neuropathy:

6
# Gene Variation Type Significance SNP ID Assembly Location
1 DHH NM_021044.4(DHH): c.2T> C (p.Met1Thr) single nucleotide variant Pathogenic rs104894346 GRCh37 Chromosome 12, 49488294: 49488294
2 DHH NM_021044.4(DHH): c.2T> C (p.Met1Thr) single nucleotide variant Pathogenic rs104894346 GRCh38 Chromosome 12, 49094511: 49094511
3 DHH NM_021044.4(DHH): c.371G> A (p.Arg124Gln) single nucleotide variant Pathogenic GRCh38 Chromosome 12, 49091322: 49091322
4 DHH NM_021044.4(DHH): c.371G> A (p.Arg124Gln) single nucleotide variant Pathogenic GRCh37 Chromosome 12, 49485105: 49485105
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Expression for 46,xy Gonadal Dysgenesis, Partial, with Minifascicular...

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Search GEO for disease gene expression data for 46,xy Gonadal Dysgenesis, Partial, with Minifascicular Neuropathy.
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Pathways for 46,xy Gonadal Dysgenesis, Partial, with Minifascicular...

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GO Terms for 46,xy Gonadal Dysgenesis, Partial, with Minifascicular...

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Sources for 46,xy Gonadal Dysgenesis, Partial, with Minifascicular...

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3 CDC
7 CNVD
9 Cosmic
10 dbSNP
11 DGIdb
17 EFO
18 ExPASy
20 FMA
29 GO
30 GTR
31 HGMD
32 HMDB
33 HPO
34 ICD10
35 ICD10 via Orphanet
36 ICD9CM
37 IUPHAR
38 KEGG
39 LifeMap
41 LOVD
43 MedGen
45 MeSH
46 MESH via Orphanet
47 MGI
50 NCI
51 NCIt
52 NDF-RT
55 NINDS
56 Novoseek
58 OMIM
59 OMIM via Orphanet
63 PubMed
65 QIAGEN
70 SNOMED-CT via HPO
71 SNOMED-CT via Orphanet
72 TGDB
73 Tocris
74 UMLS
75 UMLS via Orphanet
The MalaCards human disease database index: 1-9 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
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