MCID: CHR490
MIFTS: 14

Chromosome 10q23 Deletion Syndrome

Categories: Genetic diseases

Aliases & Classifications for Chromosome 10q23 Deletion Syndrome

MalaCards integrated aliases for Chromosome 10q23 Deletion Syndrome:

Name: Chromosome 10q23 Deletion Syndrome 12 13 45 74

Classifications:



External Ids:

Disease Ontology 12 DOID:0060389
MeSH 45 C567385
UMLS 74 C2677102

Summaries for Chromosome 10q23 Deletion Syndrome

Disease Ontology : 12 A chromosomal gene deletion syndrome that is characterized by dysmorphic facies, developmental delay and multiple congenital abnormalities and huvenile polyposis, has material basis in recurrent deletions of chromosome 10q22.3-q23.2.

MalaCards based summary : Chromosome 10q23 Deletion Syndrome is related to cowden syndrome 1 and juvenile polyposis syndrome. An important gene associated with Chromosome 10q23 Deletion Syndrome is BMPR1A (Bone Morphogenetic Protein Receptor Type 1A), and among its related pathways/superpathways is Integrated Breast Cancer Pathway. Related phenotypes are Increased shRNA abundance (Z-score > 2) and Increased shRNA abundance (Z-score > 2)

Related Diseases for Chromosome 10q23 Deletion Syndrome

Diseases related to Chromosome 10q23 Deletion Syndrome via text searches within MalaCards or GeneCards Suite gene sharing:

# Related Disease Score Top Affiliating Genes
1 cowden syndrome 1 29.6 BMPR1A PTEN
2 juvenile polyposis syndrome 29.5 BMPR1A PTEN
3 ruvalcaba syndrome 10.1
4 juvenile polyposis of infancy 9.7 BMPR1A PTEN
5 polyposis, skin pigmentation, alopecia, and fingernail changes 9.7 BMPR1A PTEN
6 large intestine cancer 9.5 BMPR1A PTEN

Graphical network of the top 20 diseases related to Chromosome 10q23 Deletion Syndrome:



Diseases related to Chromosome 10q23 Deletion Syndrome

Symptoms & Phenotypes for Chromosome 10q23 Deletion Syndrome

GenomeRNAi Phenotypes related to Chromosome 10q23 Deletion Syndrome according to GeneCards Suite gene sharing:

27 (show all 16)
# Description GenomeRNAi Source Accession Score Top Affiliating Genes
1 Increased shRNA abundance (Z-score > 2) GR00366-A-151 9.5 PTEN
2 Increased shRNA abundance (Z-score > 2) GR00366-A-152 9.5 PTEN
3 Increased shRNA abundance (Z-score > 2) GR00366-A-16 9.5 PTEN
4 Increased shRNA abundance (Z-score > 2) GR00366-A-166 9.5 BMPR1A
5 Increased shRNA abundance (Z-score > 2) GR00366-A-168 9.5 PTEN
6 Increased shRNA abundance (Z-score > 2) GR00366-A-192 9.5 BMPR1A
7 Increased shRNA abundance (Z-score > 2) GR00366-A-194 9.5 BMPR1A
8 Increased shRNA abundance (Z-score > 2) GR00366-A-214 9.5 BMPR1A PTEN
9 Increased shRNA abundance (Z-score > 2) GR00366-A-42 9.5 PTEN
10 Increased shRNA abundance (Z-score > 2) GR00366-A-63 9.5 PTEN
11 Increased shRNA abundance (Z-score > 2) GR00366-A-8 9.5 BMPR1A
12 Increased shRNA abundance (Z-score > 2) GR00366-A-82 9.5 BMPR1A
13 Increased shRNA abundance (Z-score > 2) GR00366-A-85 9.5 BMPR1A
14 Increased shRNA abundance (Z-score > 2) GR00366-A-93 9.5 PTEN
15 Decreased focal adhesion (FA) area, decreased FA length, decreased FA mean intensity, increased number of small and round FAs, increased FA abundance GR00210-A 9.16 BMPR1A PTEN
16 Increased cell death in breast cancer cell lines (MCF10A, MDA-MB-435) GR00104-A-0 8.96 BMPR1A PTEN

MGI Mouse Phenotypes related to Chromosome 10q23 Deletion Syndrome:

47
# Description MGI Source Accession Score Top Affiliating Genes
1 pigmentation MP:0001186 8.62 BMPR1A PTEN

Drugs & Therapeutics for Chromosome 10q23 Deletion Syndrome

Search Clinical Trials , NIH Clinical Center for Chromosome 10q23 Deletion Syndrome

Cochrane evidence based reviews: chromosome 10q23 deletion syndrome

Genetic Tests for Chromosome 10q23 Deletion Syndrome

Anatomical Context for Chromosome 10q23 Deletion Syndrome

Publications for Chromosome 10q23 Deletion Syndrome

Articles related to Chromosome 10q23 Deletion Syndrome:

# Title Authors Year
1
Chromosome 10q23 Deletion Syndrome: An Overlap of Bannayan-Riley-Ruvalcaba Syndrome and Juvenile Polyposis Syndrome. ( 27535890 )
2016

Variations for Chromosome 10q23 Deletion Syndrome

Expression for Chromosome 10q23 Deletion Syndrome

Search GEO for disease gene expression data for Chromosome 10q23 Deletion Syndrome.

Pathways for Chromosome 10q23 Deletion Syndrome

Pathways related to Chromosome 10q23 Deletion Syndrome according to GeneCards Suite gene sharing:

# Super pathways Score Top Affiliating Genes
1 10.81 BMPR1A PTEN

GO Terms for Chromosome 10q23 Deletion Syndrome

Biological processes related to Chromosome 10q23 Deletion Syndrome according to GeneCards Suite gene sharing:

# Name GO ID Score Top Affiliating Genes
1 nervous system development GO:0007399 8.96 BMPR1A PTEN
2 heart development GO:0007507 8.62 BMPR1A PTEN

Sources for Chromosome 10q23 Deletion Syndrome

3 CDC
7 CNVD
9 Cosmic
10 dbSNP
11 DGIdb
17 EFO
18 ExPASy
20 FMA
29 GO
30 GTR
31 HGMD
32 HMDB
33 HPO
34 ICD10
35 ICD10 via Orphanet
36 ICD9CM
37 IUPHAR
38 KEGG
39 LifeMap
41 LOVD
43 MedGen
45 MeSH
46 MESH via Orphanet
47 MGI
50 NCI
51 NCIt
52 NDF-RT
55 NINDS
56 Novoseek
58 OMIM
59 OMIM via Orphanet
63 PubMed
65 QIAGEN
70 SNOMED-CT via HPO
71 SNOMED-CT via Orphanet
72 TGDB
73 Tocris
74 UMLS
75 UMLS via Orphanet
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