MCID: GLY012
MIFTS: 36

Glycogen-Rich Clear Cell Breast Carcinoma

Categories: Cancer diseases

Aliases & Classifications for Glycogen-Rich Clear Cell Breast Carcinoma

MalaCards integrated aliases for Glycogen-Rich Clear Cell Breast Carcinoma:

Name: Glycogen-Rich Clear Cell Breast Carcinoma 12 15
Glycogen-Rich Carcinoma 12 73

Classifications:



External Ids:

Disease Ontology 12 DOID:5310
NCIt 50 C40368 C4153
SNOMED-CT 68 74280008

Summaries for Glycogen-Rich Clear Cell Breast Carcinoma

Disease Ontology : 12 A breast adenocarcinoma that is characterized by predominantly clear cytoplasm due to glycogen.

MalaCards based summary : Glycogen-Rich Clear Cell Breast Carcinoma, also known as glycogen-rich carcinoma, is related to lipid-rich carcinoma and ovarian large-cell neuroendocrine carcinoma. An important gene associated with Glycogen-Rich Clear Cell Breast Carcinoma is SYP (Synaptophysin), and among its related pathways/superpathways are Pathways in cancer and Chks in Checkpoint Regulation. Affiliated tissues include breast, lung and kidney, and related phenotypes are Decreased viability in esophageal squamous lineage and cellular

Related Diseases for Glycogen-Rich Clear Cell Breast Carcinoma

Diseases related to Glycogen-Rich Clear Cell Breast Carcinoma via text searches within MalaCards or GeneCards Suite gene sharing:

(show top 50) (show all 328)
# Related Disease Score Top Affiliating Genes
1 lipid-rich carcinoma 30.1 PGR ESR1
2 ovarian large-cell neuroendocrine carcinoma 10.3 KRT20 SYP
3 adenoma of the pancreas 10.3 KRT20 SYP
4 cutaneous ganglioneuroma 10.3 KRT20 SYP
5 angiocentric glioma 10.2 SYP ACTC1
6 calcifying aponeurotic fibroma 10.2 ACTC1 PGR
7 ovary neuroendocrine neoplasm 10.2 KRT7 SYP
8 myxoid leiomyosarcoma 10.2 ACTC1 PGR
9 sella turcica neoplasm 10.2 PGR SYP
10 tuberculum sellae meningioma 10.2 PGR SYP
11 sensory organ benign neoplasm 10.2 KRT7 SYP
12 middle ear adenoma 10.2 KRT7 SYP
13 parachordoma 10.2 ACTC1 KRT7
14 cystic basal cell carcinoma 10.2 KRT20 KRT7
15 seminal vesicle adenocarcinoma 10.2 KRT20 KRT7
16 transverse colon cancer 10.2 KRT20 KRT7
17 appendix adenocarcinoma 10.2 KRT20 KRT7
18 malignant syringoma 10.2 KRT20 KRT7
19 glandular cystitis 10.2 KRT20 KRT7
20 papillary transitional carcinoma 10.2 KRT20 KRT7
21 eyelid carcinoma 10.2 KRT20 KRT7
22 krukenberg carcinoma 10.2 KRT20 KRT7
23 large intestine adenocarcinoma 10.2 KRT20 KRT7
24 linitis plastica 10.2 KRT20 KRT7
25 lung acinar adenocarcinoma 10.2 KRT20 KRT7
26 eccrine papillary adenocarcinoma 10.2 KRT7 PGR
27 adenoid squamous cell carcinoma 10.2 KRT20 KRT7
28 intratubular embryonal carcinoma 10.2 KRT20 KRT7
29 seminal vesicle tumor 10.2 KRT7 SYP
30 pulmonary sclerosing hemangioma 10.2 KRT7 SYP
31 bile duct cystadenocarcinoma 10.2 KRT20 KRT7
32 jejunal adenocarcinoma 10.2 KRT20 KRT7
33 endosalpingiosis 10.2 KRT7 PGR
34 ovarian mucinous adenocarcinoma 10.2 KRT20 KRT7
35 sertoli cell tumor 10.2 SYP PGR
36 thymus adenocarcinoma 10.2 KRT20 KRT7
37 appendix disease 10.2 KRT20 KRT7
38 gastric diffuse adenocarcinoma 10.2 KRT20 KRT7
39 meibomian cyst 10.2 KRT20 KRT7
40 binswanger's disease 10.2 SYP ACTC1
41 mucinous ovarian cystadenoma 10.2 SYP KRT7
42 bladder adenocarcinoma 10.2 KRT7 KRT20
43 spermatocele 10.2 PGR SYP
44 bladder lymphoma 10.2 KRT7 KRT20
45 chronic cystitis 10.2 KRT7 KRT20
46 gastric squamous cell carcinoma 10.2 SYP KRT7
47 rectum adenocarcinoma 10.2 KRT20 KRT7
48 glomangiomyoma 10.2 ACTC1 ESR1
49 corneal abscess 10.2 PGR KRT7
50 renal pelvis carcinoma 10.2 KRT7 KRT20

Graphical network of the top 20 diseases related to Glycogen-Rich Clear Cell Breast Carcinoma:



Diseases related to Glycogen-Rich Clear Cell Breast Carcinoma

Symptoms & Phenotypes for Glycogen-Rich Clear Cell Breast Carcinoma

GenomeRNAi Phenotypes related to Glycogen-Rich Clear Cell Breast Carcinoma according to GeneCards Suite gene sharing:

26
# Description GenomeRNAi Source Accession Score Top Affiliating Genes
1 Decreased viability in esophageal squamous lineage GR00235-A 9.17 BRCA1 BRCA2 CDKN2A ESR1 KRT7 PGR

MGI Mouse Phenotypes related to Glycogen-Rich Clear Cell Breast Carcinoma:

46 (show all 12)
# Description MGI Source Accession Score Top Affiliating Genes
1 cellular MP:0005384 10.1 ACTC1 BRCA1 BRCA2 CDKN2A ESR1 KRT7
2 behavior/neurological MP:0005386 10.05 BRCA1 BRCA2 CDKN2A ESR1 PGR SYP
3 homeostasis/metabolism MP:0005376 10.03 ACTC1 BRCA1 BRCA2 CDKN2A ESR1 KRT7
4 embryo MP:0005380 9.95 BRCA1 BRCA2 CDKN2A ESR1 PGR TP53
5 endocrine/exocrine gland MP:0005379 9.93 BRCA1 BRCA2 CDKN2A ESR1 PGR TP53
6 integument MP:0010771 9.88 BRCA1 BRCA2 CDKN2A ESR1 PGR TP53
7 muscle MP:0005369 9.8 ACTC1 BRCA1 CDKN2A ESR1 PGR TP53
8 limbs/digits/tail MP:0005371 9.77 BRCA1 BRCA2 ESR1 PGR TP53
9 neoplasm MP:0002006 9.73 BRCA1 BRCA2 CDKN2A ESR1 PGR TP53
10 normal MP:0002873 9.7 ACTC1 BRCA1 BRCA2 ESR1 PGR SYP
11 reproductive system MP:0005389 9.43 BRCA1 BRCA2 CDKN2A ESR1 PGR TP53
12 skeleton MP:0005390 9.1 BRCA1 BRCA2 CDKN2A ESR1 PGR TP53

Drugs & Therapeutics for Glycogen-Rich Clear Cell Breast Carcinoma

Search Clinical Trials , NIH Clinical Center for Glycogen-Rich Clear Cell Breast Carcinoma

Genetic Tests for Glycogen-Rich Clear Cell Breast Carcinoma

Anatomical Context for Glycogen-Rich Clear Cell Breast Carcinoma

MalaCards organs/tissues related to Glycogen-Rich Clear Cell Breast Carcinoma:

41
Breast, Lung, Kidney, Ovary, Pancreas, Cervix, Thymus

Publications for Glycogen-Rich Clear Cell Breast Carcinoma

Articles related to Glycogen-Rich Clear Cell Breast Carcinoma:

# Title Authors Year
1
Fine-needle aspiration cytology of glycogen-rich carcinoma of breast: report of a case and review of literature. ( 16138378 )
2005
2
Cytological analysis of glycogen-rich carcinoma of the breast: report of two cases. ( 12323010 )
2002
3
[Glycogen-rich clear-cell breast carcinoma with neuroendocrine differentiation features]. ( 11785121 )
2001

Variations for Glycogen-Rich Clear Cell Breast Carcinoma

Expression for Glycogen-Rich Clear Cell Breast Carcinoma

Search GEO for disease gene expression data for Glycogen-Rich Clear Cell Breast Carcinoma.

Pathways for Glycogen-Rich Clear Cell Breast Carcinoma

Pathways related to Glycogen-Rich Clear Cell Breast Carcinoma according to GeneCards Suite gene sharing:

(show all 17)
# Super pathways Score Top Affiliating Genes
1 12.53 BRCA2 CDKN2A ESR1 TP53
2
Show member pathways
12.34 BRCA1 BRCA2 ESR1 TP53
3
Show member pathways
12.33 BRCA1 BRCA2 CDKN2A ESR1 TP53
4 12.14 BRCA1 BRCA2 CDKN2A TP53
5
Show member pathways
11.77 BRCA1 BRCA2 CDKN2A ESR1 PGR TP53
6
Show member pathways
11.7 BRCA1 CDKN2A ESR1 PGR
7
Show member pathways
11.5 BRCA1 BRCA2 TP53
8 11.44 BRCA1 BRCA2 ESR1 TP53
9 11.36 BRCA1 CDKN2A TP53
10 11.3 BRCA1 BRCA2 TP53
11 11.07 BRCA1 TP53
12 11.06 CDKN2A TP53
13 11.04 BRCA1 TP53
14 11 BRCA1 TP53
15 10.84 CDKN2A TP53
16
Show member pathways
10.82 CDKN2A TP53
17 10.74 BRCA1 TP53

GO Terms for Glycogen-Rich Clear Cell Breast Carcinoma

Cellular components related to Glycogen-Rich Clear Cell Breast Carcinoma according to GeneCards Suite gene sharing:

# Name GO ID Score Top Affiliating Genes
1 cytosol GO:0005829 9.76 ACTC1 BRCA2 CDKN2A ESR1 KRT20 KRT7
2 cytoplasm GO:0005737 9.61 ACTC1 BRCA1 BRCA2 CDKN2A ESR1 KRT20
3 lateral element GO:0000800 8.62 BRCA1 BRCA2

Biological processes related to Glycogen-Rich Clear Cell Breast Carcinoma according to GeneCards Suite gene sharing:

(show all 12)
# Name GO ID Score Top Affiliating Genes
1 cell cycle GO:0007049 9.81 BRCA1 BRCA2 CDKN2A TP53
2 positive regulation of transcription by RNA polymerase II GO:0045944 9.8 BRCA1 CDKN2A ESR1 PGR TP53
3 positive regulation of gene expression GO:0010628 9.67 ACTC1 BRCA1 CDKN2A TP53
4 positive regulation of transcription, DNA-templated GO:0045893 9.55 BRCA1 BRCA2 CDKN2A ESR1 TP53
5 response to gamma radiation GO:0010332 9.49 BRCA2 TP53
6 cell aging GO:0007569 9.48 BRCA2 TP53
7 intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator GO:0042771 9.46 BRCA2 TP53
8 positive regulation of cell cycle arrest GO:0071158 9.43 BRCA1 TP53
9 replicative senescence GO:0090399 9.32 CDKN2A TP53
10 positive regulation of RNA polymerase II transcriptional preinitiation complex assembly GO:0045899 9.26 ESR1 TP53
11 chordate embryonic development GO:0043009 8.96 BRCA1 BRCA2
12 DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator GO:0006978 8.8 BRCA1 BRCA2 TP53

Molecular functions related to Glycogen-Rich Clear Cell Breast Carcinoma according to GeneCards Suite gene sharing:

# Name GO ID Score Top Affiliating Genes
1 DNA binding GO:0003677 9.73 BRCA1 BRCA2 CDKN2A ESR1 PGR TP53
2 enzyme binding GO:0019899 9.26 BRCA1 ESR1 PGR TP53
3 steroid binding GO:0005496 9.16 ESR1 PGR
4 identical protein binding GO:0042802 9.1 BRCA1 BRCA2 ESR1 PGR SYP TP53

Sources for Glycogen-Rich Clear Cell Breast Carcinoma

3 CDC
7 CNVD
9 Cosmic
10 dbSNP
11 DGIdb
17 ExPASy
19 FMA
28 GO
29 GTR
30 HGMD
31 HMDB
32 HPO
33 ICD10
34 ICD10 via Orphanet
35 ICD9CM
36 IUPHAR
37 KEGG
38 LifeMap
40 LOVD
42 MedGen
44 MeSH
45 MESH via Orphanet
46 MGI
49 NCI
50 NCIt
51 NDF-RT
54 NINDS
55 Novoseek
57 OMIM
58 OMIM via Orphanet
62 PubMed
64 QIAGEN
69 SNOMED-CT via HPO
70 SNOMED-CT via Orphanet
71 TGDB
72 Tocris
73 UMLS
74 UMLS via Orphanet
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