PDA3
MCID: PTN012
MIFTS: 16

Patent Ductus Arteriosus 3 (PDA3)

Categories: Blood diseases, Cardiovascular diseases, Fetal diseases, Genetic diseases, Rare diseases, Respiratory diseases

Aliases & Classifications for Patent Ductus Arteriosus 3

MalaCards integrated aliases for Patent Ductus Arteriosus 3:

Name: Patent Ductus Arteriosus 3 58 76 6
Pda3 58 76

Characteristics:

OMIM:

58
Inheritance:
autosomal dominant


HPO:

33
patent ductus arteriosus 3:
Inheritance autosomal dominant inheritance


Classifications:



External Ids:

OMIM 58 617039
MeSH 45 D004374
SNOMED-CT via HPO 70 263681008 83330001

Summaries for Patent Ductus Arteriosus 3

OMIM : 58 The ductus arteriosus is a vital in utero vascular connection between the aorta and pulmonary artery that allows right ventricular output to bypass the nonventilated fetal lungs. Postnatal closure of the ductus arteriosus is an important step in normal cardiopulmonary transition. Failure of ductal closure results in patent ductus arteriosus (PDA), which occurs in approximately 2 to 8 per 10,000 term infants and constitutes 5% to 7% of all congenital heart defects (summary by Hajj and Dagle, 2012). For a discussion of genetic heterogeneity of isolated PDA, see PDA1 (607411). (617039)

MalaCards based summary : Patent Ductus Arteriosus 3, is also known as pda3. An important gene associated with Patent Ductus Arteriosus 3 is PRDM6 (PR/SET Domain 6). Affiliated tissues include heart, fetal lung and placenta, and related phenotype is patent ductus arteriosus.

UniProtKB/Swiss-Prot : 76 Patent ductus arteriosus 3: A congenital heart defect characterized by the persistent opening of fetal ductus arteriosus that fails to close after birth. Fetal ductus arteriosus connects the pulmonary artery to the descending aorta, allowing unoxygenated blood to bypass the lung and flow to the placenta. Normally, the ductus occludes shortly after birth.

Related Diseases for Patent Ductus Arteriosus 3

Diseases in the Patent Ductus Arteriosus 1 family:

Patent Ductus Arteriosus 2 Patent Ductus Arteriosus 3

Symptoms & Phenotypes for Patent Ductus Arteriosus 3

Human phenotypes related to Patent Ductus Arteriosus 3:

33
# Description HPO Frequency HPO Source Accession
1 patent ductus arteriosus 33 HP:0001643

Symptoms via clinical synopsis from OMIM:

58
Cardiovascular Vascular:
patent ductus arteriosus

Clinical features from OMIM:

617039

Drugs & Therapeutics for Patent Ductus Arteriosus 3

Search Clinical Trials , NIH Clinical Center for Patent Ductus Arteriosus 3

Genetic Tests for Patent Ductus Arteriosus 3

Anatomical Context for Patent Ductus Arteriosus 3

MalaCards organs/tissues related to Patent Ductus Arteriosus 3:

42
Heart, Fetal Lung, Placenta

Publications for Patent Ductus Arteriosus 3

Articles related to Patent Ductus Arteriosus 3:

# Title Authors Year
1
Mutations in the Histone Modifier PRDM6 Are Associated with Isolated Nonsyndromic Patent Ductus Arteriosus. ( 27181681 )
2016
2
Patent ductus arteriosus. Study of two families. ( 5897316 )
1965

Variations for Patent Ductus Arteriosus 3

UniProtKB/Swiss-Prot genetic disease variations for Patent Ductus Arteriosus 3:

76
# Symbol AA change Variation ID SNP ID
1 PRDM6 p.Gln462Arg VAR_077015 rs879253872
2 PRDM6 p.Arg549Gln VAR_077016 rs879255278

ClinVar genetic disease variations for Patent Ductus Arteriosus 3:

6
# Gene Variation Type Significance SNP ID Assembly Location
1 PRDM6 NM_001136239.3(PRDM6): c.1646G> A (p.Arg549Gln) single nucleotide variant Pathogenic rs879255278 GRCh37 Chromosome 5, 122515990: 122515990
2 PRDM6 NM_001136239.3(PRDM6): c.1646G> A (p.Arg549Gln) single nucleotide variant Pathogenic rs879255278 GRCh38 Chromosome 5, 123180296: 123180296
3 PRDM6 NM_001136239.3(PRDM6): c.788G> C (p.Cys263Ser) single nucleotide variant Pathogenic rs879255279 GRCh38 Chromosome 5, 123099849: 123099849
4 PRDM6 NM_001136239.3(PRDM6): c.788G> C (p.Cys263Ser) single nucleotide variant Pathogenic rs879255279 GRCh37 Chromosome 5, 122435544: 122435544
5 PRDM6 NM_001136239.3(PRDM6): c.1385A> G (p.Gln462Arg) single nucleotide variant Pathogenic rs879253872 GRCh37 Chromosome 5, 122506691: 122506691
6 PRDM6 NM_001136239.3(PRDM6): c.1385A> G (p.Gln462Arg) single nucleotide variant Pathogenic rs879253872 GRCh38 Chromosome 5, 123170997: 123170997

Expression for Patent Ductus Arteriosus 3

Search GEO for disease gene expression data for Patent Ductus Arteriosus 3.

Pathways for Patent Ductus Arteriosus 3

GO Terms for Patent Ductus Arteriosus 3

Sources for Patent Ductus Arteriosus 3

3 CDC
7 CNVD
9 Cosmic
10 dbSNP
11 DGIdb
17 EFO
18 ExPASy
20 FMA
29 GO
30 GTR
31 HGMD
32 HMDB
33 HPO
34 ICD10
35 ICD10 via Orphanet
36 ICD9CM
37 IUPHAR
38 KEGG
39 LifeMap
41 LOVD
43 MedGen
45 MeSH
46 MESH via Orphanet
47 MGI
50 NCI
51 NCIt
52 NDF-RT
55 NINDS
56 Novoseek
58 OMIM
59 OMIM via Orphanet
63 PubMed
65 QIAGEN
70 SNOMED-CT via HPO
71 SNOMED-CT via Orphanet
72 TGDB
73 Tocris
74 UMLS
75 UMLS via Orphanet
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