Retinitis Pigmentosa 76 disease: Malacards - Research Articles, Drugs, Genes, Clinical Trials

Sources

Aliases & Classifications for Retinitis Pigmentosa 76

MalaCards integrated aliases for Retinitis Pigmentosa 76:

Name: Retinitis Pigmentosa 76 ⁵⁶ ⁷³ ²⁹ ⁶

Rp76 ⁵⁶ ⁷³

Characteristics:

OMIM:

⁵⁶

Inheritance:
autosomal recessive

Miscellaneous:
onset of symptoms in second decade of life

HPO:

³¹

retinitis pigmentosa 76:
Inheritance autosomal recessive inheritance

Classifications:

MalaCards categories:
Global: Genetic diseases Rare diseases
Anatomical: Eye diseases

See all MalaCards categories (disease lists)

External Ids:

OMIM ⁵⁶ 617123

OMIM Phenotypic Series ⁵⁶ PS268000

MeSH ⁴³ D012174

MedGen ⁴¹ C4310704 CN238501

SNOMED-CT via HPO ⁶⁸ 13164000 193387007 258211005 more

Sources

Summaries for Retinitis Pigmentosa 76

UniProtKB/Swiss-Prot : ⁷³ Retinitis pigmentosa 76: A form of retinitis pigmentosa, a retinal dystrophy belonging to the group of pigmentary retinopathies. Retinitis pigmentosa is characterized by retinal pigment deposits visible on fundus examination and primary loss of rod photoreceptor cells followed by secondary loss of cone photoreceptors. Patients typically have night vision blindness and loss of midperipheral visual field. As their condition progresses, they lose their far peripheral visual field and eventually central vision as well. RP76 inheritance is autosomal recessive.

MalaCards based summary : Retinitis Pigmentosa 76, also known as rp76, is related to retinitis pigmentosa and muscle eye brain disease. An important gene associated with Retinitis Pigmentosa 76 is POMGNT1 (Protein O-Linked Mannose N-Acetylglucosaminyltransferase 1 (Beta 1,2-)). Affiliated tissues include eye, brain and bone, and related phenotypes are cystoid macular edema and nyctalopia

More information from OMIM: 617123 PS268000

Sources

Related Diseases for Retinitis Pigmentosa 76

Diseases in the Retinitis Pigmentosa family:

Retinitis Pigmentosa 1	Retinitis Pigmentosa 9
Retinitis Pigmentosa 10	Retinitis Pigmentosa, Late-Adult Onset
Retinitis Pigmentosa 3	Retinitis Pigmentosa 24
Retinitis Pigmentosa 23	Retinitis Pigmentosa 34
Retinitis Pigmentosa 2	Retinitis Pigmentosa 6
Retinitis Pigmentosa 13	Retinitis Pigmentosa 12
Retinitis Pigmentosa 14	Retinitis Pigmentosa 11
Retinitis Pigmentosa 17	Retinitis Pigmentosa 18
Retinitis Pigmentosa 19	Retinitis Pigmentosa 22
Retinitis Pigmentosa 25	Retinitis Pigmentosa 28
Retinitis Pigmentosa 30	Retinitis Pigmentosa 7
Retinitis Pigmentosa 26	Retinitis Pigmentosa 32
Retinitis Pigmentosa 31	Retinitis Pigmentosa 35
Retinitis Pigmentosa 33	Retinitis Pigmentosa 36
Retinitis Pigmentosa 37	Retinitis Pigmentosa 41
Retinitis Pigmentosa 29	Retinitis Pigmentosa 46
Retinitis Pigmentosa 42	Retinitis Pigmentosa 50
Retinitis Pigmentosa 54	Retinitis Pigmentosa 51
Retinitis Pigmentosa 55	Retinitis Pigmentosa 56
Retinitis Pigmentosa 57	Retinitis Pigmentosa 58
Retinitis Pigmentosa 4	Retinitis Pigmentosa 27
Retinitis Pigmentosa 49	Retinitis Pigmentosa 47
Retinitis Pigmentosa 45	Retinitis Pigmentosa 44
Retinitis Pigmentosa 20	Retinitis Pigmentosa 40
Retinitis Pigmentosa 39	Retinitis Pigmentosa 43
Retinitis Pigmentosa 48	Retinitis Pigmentosa 59
Retinitis Pigmentosa 38	Retinitis Pigmentosa 60
Retinitis Pigmentosa 61	Retinitis Pigmentosa 62
Retinitis Pigmentosa 63	Retinitis Pigmentosa 66
Retinitis Pigmentosa 67	Retinitis Pigmentosa 68
Retinitis Pigmentosa 69	Retinitis Pigmentosa 70
Retinitis Pigmentosa 71	Retinitis Pigmentosa 72
Retinitis Pigmentosa 73	Retinitis Pigmentosa 74
Retinitis Pigmentosa 75	Retinitis Pigmentosa 76
Retinitis Pigmentosa 77	Retinitis Pigmentosa 78
Retinitis Pigmentosa 79	Retinitis Pigmentosa 80
Retinitis Pigmentosa 81	Retinitis Pigmentosa 83
Retinitis Pigmentosa 84	Retinitis Pigmentosa 85
Retinitis Pigmentosa 86	Nonsyndromic Retinitis Pigmentosa

Diseases related to Retinitis Pigmentosa 76 via text searches within MalaCards or GeneCards Suite gene sharing:

#	Related Disease	Score	Top Affiliating Genes
1	retinitis pigmentosa	9.5	TSPAN1 POMGNT1
2	muscle eye brain disease	9.4	TSPAN1 POMGNT1
3	muscular dystrophy-dystroglycanopathy	9.2	TSPAN1 POMGNT1

Sources

Symptoms & Phenotypes for Retinitis Pigmentosa 76

Human phenotypes related to Retinitis Pigmentosa 76:

³¹

#	Description	HPO Frequency	HPO Source Accession
1	cystoid macular edema ³¹	occasional (7.5%)	HP:0011505
2	nyctalopia ³¹		HP:0000662
3	reduced visual acuity ³¹		HP:0007663
4	retinal thinning ³¹		HP:0030329
5	peripapillary atrophy ³¹		HP:0500087

Symptoms via clinical synopsis from OMIM:

⁵⁶

Head And Neck Eyes:
nyctalopia
reduced visual acuity
peripapillary atrophy
macular involvement (in some patients)
attenuated retinal vessels
more

Clinical features from OMIM:

617123

GenomeRNAi Phenotypes related to Retinitis Pigmentosa 76 according to GeneCards Suite gene sharing:

²⁶

#	Description	GenomeRNAi Source Accession	Score	Top Affiliating Genes
1	Downregulation of Wnt pathway after Wnt3A stimulation	GR00057-A-2	8.62	POMGNT1 TSPAN1

Sources

Drugs & Therapeutics for Retinitis Pigmentosa 76

Search Clinical Trials , NIH Clinical Center for Retinitis Pigmentosa 76

Sources

Genetic Tests for Retinitis Pigmentosa 76

Genetic tests related to Retinitis Pigmentosa 76:

#	Genetic test	Affiliating Genes
1	Retinitis Pigmentosa 76 ²⁹	POMGNT1

Sources

Anatomical Context for Retinitis Pigmentosa 76

MalaCards organs/tissues related to Retinitis Pigmentosa 76:

⁴⁰

Eye, Brain, Bone, Retina

Sources

Publications for Retinitis Pigmentosa 76

Articles related to Retinitis Pigmentosa 76:

#	Title	Authors	PMID	Year
1	Homozygosity Mapping and Whole-Genome Sequencing Links a Missense Mutation in POMGNT1 to Autosomal Recessive Retinitis Pigmentosa. ⁵⁶ ⁶	Wang NH...Chen YT	27391550	2016
2	Mutations in POMGNT1 cause non-syndromic retinitis pigmentosa. ⁵⁶ ⁶	Xu M...Chen R	26908613	2016
3	In Vivo CRISPR/Cas9 Gene Editing Corrects Retinal Dystrophy in the S334ter-3 Rat Model of Autosomal Dominant Retinitis Pigmentosa. ⁶	Bakondi B...Wang S	26666451	2016
4	Novel POMGNT1 point mutations and intragenic rearrangements associated with muscle-eye-brain disease. ⁶	Saredi S...Mora M	22554691	2012
5	Clinical utility gene card for: BEST1-related dystrophies (Bestrophinopathies). ⁶	Ramsden SC...Manson FD	22234150	2012
6	POMGnT1 mutation and phenotypic spectrum in muscle-eye-brain disease. ⁶	Diesen C...Lehesjoki AE	15466003	2004
7	Nonsyndromic Retinitis Pigmentosa Overview ⁶	Fahim AT...Weleber RG	20301590	2000

Sources

Genes for Retinitis Pigmentosa 76

Genes related to Retinitis Pigmentosa 76 (1 elite genes):

- Elite gene

- Cancer Census gene in COSMIC

#	Symbol	Description	Category	Score	Evidence	PubmedIds
1	POMGNT1	Protein O-Linked Mannose N-Acetylglucosaminyltransferase 1 (Beta 1,2-)	Protein Coding	1318.82	Molecular basis known ⁵⁶ Pathogenic/Likely pathogenic ⁶ Causative variation ⁷³ Genetic Tests ²⁹ GeneCards inferred via : Disorders Variants (show sections)	15466003 22554691 27391550 (more) 26908613
2	TSPAN1	Tetraspanin 1	Protein Coding	8.94	GeneCards inferred via : Variants (show sections)

Sources

Variations for Retinitis Pigmentosa 76

ClinVar genetic disease variations for Retinitis Pigmentosa 76:

⁶ (show all 21) ‎‎ ‎‎ ‎‎ ‎‎ ‎‎ ‎‎ ‎‎ ‎‎ ‎‎ ‎‎ ‎‎ ‎‎ ‎‎ ‎‎ ‎‎ ‎‎ ‎‎ ‎‎ ‎‎ ‎‎ ‎‎

#	Gene	Name	Type	Significance	ClinVarId	dbSNP ID	GRCh37 Pos	GRCh38 Pos
1	POMGNT1	NM_017739.3(POMGNT1):c.643C>T (p.Arg215Ter)	SNV	Pathogenic	56604	rs386834034	1:46660525-46660525	1:46194853-46194853
2	POMGNT1	NM_017739.3(POMGNT1):c.931C>T (p.Arg311Ter)	SNV	Pathogenic	56610	rs386834039	1:46659546-46659546	1:46193874-46193874
3	POMGNT1	NM_017739.3(POMGNT1):c.860T>G (p.Ile287Ser)	SNV	Pathogenic	254270	rs200863680	1:46659965-46659965	1:46194293-46194293
4	POMGNT1	NM_017739.3(POMGNT1):c.466G>A (p.Glu156Lys)	SNV	Pathogenic	254272	rs886037947	1:46661551-46661551	1:46195879-46195879
5	POMGNT1	NM_017739.3(POMGNT1):c.1505G>C (p.Gly502Ala)	SNV	Pathogenic	254274	rs886037948	1:46657804-46657804	1:46192132-46192132
6	POMGNT1	NM_017739.3(POMGNT1):c.359T>G (p.Leu120Arg)	SNV	Pathogenic	254275	rs886037949	1:46661745-46661745	1:46196073-46196073
7	POMGNT1	NM_017739.3(POMGNT1):c.636C>T (p.Phe212=)	SNV	Pathogenic	265399	rs190057175	1:46660532-46660532	1:46194860-46194860
8	POMGNT1	NM_017739.3(POMGNT1):c.187C>T (p.Arg63Ter)	SNV	Pathogenic	3994	rs193919337	1:46662690-46662690	1:46197018-46197018
9	POMGNT1	NM_017739.3(POMGNT1):c.1539+1G>A	SNV	Pathogenic	56582	rs138642840	1:46657769-46657769	1:46192097-46192097
10	POMGNT1	NM_017739.3(POMGNT1):c.1895+1G>A	SNV	Pathogenic/Likely pathogenic	56592	rs386834024	1:46655129-46655129	1:46189457-46189457
11	POMGNT1	NM_017739.3(POMGNT1):c.1469G>A (p.Cys490Tyr)	SNV	Pathogenic/Likely pathogenic	4000	rs267606960	1:46657840-46657840	1:46192168-46192168
12	POMGNT1	NM_017739.3(POMGNT1):c.1324C>T (p.Arg442Cys)	SNV	Pathogenic/Likely pathogenic	3992	rs28940869	1:46658069-46658069	1:46192397-46192397
13	POMGNT1	NM_017739.3(POMGNT1):c.1463G>A (p.Arg488Gln)	SNV	Likely pathogenic	422459	rs766382416	1:46657846-46657846	1:46192174-46192174
14	POMGNT1	NM_017739.3(POMGNT1):c.1895+1G>T	SNV	Conflicting interpretations of pathogenicity	56593	rs386834024	1:46655129-46655129	1:46189457-46189457
15	POMGNT1	NM_017739.3(POMGNT1):c.1285-2A>G	SNV	Conflicting interpretations of pathogenicity	56578	rs386834012	1:46658110-46658110	1:46192438-46192438
16	POMGNT1	NM_017739.3(POMGNT1):c.839G>A (p.Ser280Asn)	SNV	Conflicting interpretations of pathogenicity	162588	rs142485035	1:46659986-46659986	1:46194314-46194314
17	POMGNT1	NM_017739.3(POMGNT1):c.319C>A (p.Arg107Ser)	SNV	Uncertain significance	162590	rs375420073	1:46662438-46662438	1:46196766-46196766
18	POMGNT1	NM_017739.3(POMGNT1):c.355G>A (p.Val119Met)	SNV	Uncertain significance	423754	rs148498470	1:46661749-46661749	1:46196077-46196077
19	POMGNT1	NM_017739.3(POMGNT1):c.1010T>C (p.Ile337Thr)	SNV	Uncertain significance	285192	rs138745073	1:46659252-46659252	1:46193580-46193580
20	POMGNT1	NM_017739.3(POMGNT1):c.269G>A (p.Arg90His)	SNV	Uncertain significance	290280	rs139701867	1:46662488-46662488	1:46196816-46196816
21	POMGNT1	NM_017739.3(POMGNT1):c.1456C>G (p.Arg486Gly)	SNV	Uncertain significance	291060	rs534543454	1:46657853-46657853	1:46192181-46192181

UniProtKB/Swiss-Prot genetic disease variations for Retinitis Pigmentosa 76:

⁷³

#	Symbol	AA change	Variation ID	SNP ID
1	POMGNT1	p.Glu156Lys	VAR_076524	rs886037947
2	POMGNT1	p.Ile287Ser	VAR_076525	rs200863680
3	POMGNT1	p.Gly502Ala	VAR_076526	rs886037948
4	POMGNT1	p.Leu120Arg	VAR_077054	rs886037949

Sources

Expression for Retinitis Pigmentosa 76

Search GEO for disease gene expression data for Retinitis Pigmentosa 76.

Sources

Pathways for Retinitis Pigmentosa 76

Sources

GO Terms for Retinitis Pigmentosa 76

Sources

Sources for Retinitis Pigmentosa 76

¹ BioSystems

² BitterDB

³ CDC

⁴ Cell Signaling Technology

⁵ ClinicalTrials

⁶ ClinVar

⁷ CNVD

⁸ Cochrane Library

⁹ Cosmic

¹⁰ dbSNP

¹¹ DGIdb

¹² Disease Ontology

¹³ diseasecard

¹⁴ DiseaseEnhancer

¹⁵ DISEASES

¹⁶ DrugBank

¹⁷ EFO

¹⁸ ExPASy

¹⁹ FMA

²⁰ GeneAnalytics

²¹ GeneCards

²² GeneGo (Thomson Reuters)

²³ GeneHancer via GeneCards

²⁴ GeneReviews

²⁵ Genetics Home Reference

²⁶ GenomeRNAi

²⁷ GEO DataSets

²⁸ GO

²⁹ GTR

³⁰ HMDB

³¹ HPO

³² ICD10

³³ ICD10 via Orphanet

³⁴ ICD9CM

³⁵ IUPHAR

³⁶ KEGG

³⁷ LifeMap

³⁸ LncRNADisease

³⁹ LOVD

⁴⁰ MalaCards

⁴¹ MedGen

⁴² MedlinePlus

⁴³ MeSH

⁴⁴ MESH via Orphanet

⁴⁵ MGI

⁴⁶ miR2Disease

⁴⁷ NCBI Bookshelf

⁴⁸ NCI

⁴⁹ NCIt

⁵⁰ NDF-RT

⁵¹ NIH Clinical Center

⁵² NIH Rare Diseases

⁵³ NINDS

⁵⁴ Novoseek

⁵⁵ Novus Biologicals

⁵⁶ OMIM

⁵⁷ OMIM via Orphanet

⁵⁸ Orphanet

⁵⁹ PathCards

⁶⁰ PharmGKB

⁶¹ PubMed

⁶² PubMed Health

⁶³ QIAGEN

⁶⁴ R&D Systems

⁶⁵ Reactome

⁶⁶ Sino Biological

⁶⁷ SNOMED-CT

⁶⁸ SNOMED-CT via HPO

⁶⁹ TGDB

⁷⁰ Tocris

⁷¹ UMLS

⁷² UMLS via Orphanet

⁷³ UniProtKB/Swiss-Prot

⁷⁴ Wikipedia

Retinitis Pigmentosa 76 (RP76)

Aliases & Classifications for Retinitis Pigmentosa 76

MalaCards integrated aliases for Retinitis Pigmentosa 76:

Characteristics:

OMIM:

HPO:

Classifications:

External Ids:

Summaries for Retinitis Pigmentosa 76

Related Diseases for Retinitis Pigmentosa 76

Diseases in the Retinitis Pigmentosa family:

Diseases related to Retinitis Pigmentosa 76 via text searches within MalaCards or GeneCards Suite gene sharing:

Symptoms & Phenotypes for Retinitis Pigmentosa 76

Human phenotypes related to Retinitis Pigmentosa 76:

Symptoms via clinical synopsis from OMIM:

Clinical features from OMIM:

GenomeRNAi Phenotypes related to Retinitis Pigmentosa 76 according to GeneCards Suite gene sharing:

Drugs & Therapeutics for Retinitis Pigmentosa 76

Genetic Tests for Retinitis Pigmentosa 76

Genetic tests related to Retinitis Pigmentosa 76:

Anatomical Context for Retinitis Pigmentosa 76

MalaCards organs/tissues related to Retinitis Pigmentosa 76:

Publications for Retinitis Pigmentosa 76

Articles related to Retinitis Pigmentosa 76:

Genes for Retinitis Pigmentosa 76

Genes related to Retinitis Pigmentosa 76 (1 elite genes):

Variations for Retinitis Pigmentosa 76

ClinVar genetic disease variations for Retinitis Pigmentosa 76:

UniProtKB/Swiss-Prot genetic disease variations for Retinitis Pigmentosa 76:

Expression for Retinitis Pigmentosa 76

Pathways for Retinitis Pigmentosa 76

GO Terms for Retinitis Pigmentosa 76

Sources for Retinitis Pigmentosa 76