MCID: SPN060
MIFTS: 40

Spondylocarpotarsal Synostosis Syndrome

Categories: Genetic diseases, Rare diseases, Bone diseases, Fetal diseases

Aliases & Classifications for Spondylocarpotarsal Synostosis Syndrome

MalaCards integrated aliases for Spondylocarpotarsal Synostosis Syndrome:

Name: Spondylocarpotarsal Synostosis Syndrome 57 12 53 25 75 37 29 13 6 40 73
Vertebral Fusion with Carpal Coalition 57 12 53 25 75
Spondylocarpotarsal Syndrome 57 12 53 25 75
Sct 57 12 53 25 75
Congenital Scoliosis with Unilateral Unsegmented Bar 12 25 75
Congenital Synspondylism 12 25 75
Spondylocarpotarsal Synostosis 12 59
Scoliosis, Congenital, with Unilateral Unsegmented Bar 57
Scoliosis, Congenital with Unilateral Unsegmented Bar 53
Synspondylism, Congenital 57
Synspondylism Congenital 53
Synspondylism 59
Sct Syndrome 25

Characteristics:

Orphanet epidemiological data:

59
spondylocarpotarsal synostosis
Inheritance: Autosomal recessive; Prevalence: <1/1000000 (Worldwide); Age of onset: Childhood; Age of death: normal life expectancy;

OMIM:

57
Inheritance:
autosomal recessive


HPO:

32
spondylocarpotarsal synostosis syndrome:
Inheritance autosomal recessive inheritance


Classifications:



Summaries for Spondylocarpotarsal Synostosis Syndrome

NIH Rare Diseases : 53 Spondylocarpotarsal synostosis (SCT) syndrome is an inherited syndrome characterized by disproportionate short stature, abnormalities of the vertebrae in the spine, scoliosisand lordosis, carpal and tarsal fusion (fusion of the bones in the hands and feet), clubfoot, and facial abnormalities such as round face, large forehead, and up-turned nostrils. Other features can include cleft palate, deafness, loose joints, and poor formation of tooth enamel. SCT syndrome has been associated with retinal anomalies and cataracts. However, these eye problems are usually not severe enough to impair vision. This condition is caused by mutationsin the FLNB gene. It is inherited in an autosomal recessive manner in families, which means that parents are usually unaffected and children have to have inherited a gene mutation from each parent.

MalaCards based summary : Spondylocarpotarsal Synostosis Syndrome, also known as vertebral fusion with carpal coalition, is related to synostosis and scoliosis. An important gene associated with Spondylocarpotarsal Synostosis Syndrome is FLNB (Filamin B). Affiliated tissues include bone, eye and lung, and related phenotypes are hypertelorism and short neck

UniProtKB/Swiss-Prot : 75 Spondylocarpotarsal synostosis syndrome: Disorder characterized by short stature and vertebral, carpal and tarsal fusions.

Genetics Home Reference : 25 Spondylocarpotarsal synostosis syndrome is a disorder that affects the development of bones throughout the body. Newborns with this disorder are of approximately normal length, but impaired growth of the torso results in short stature over time. The bones of the spine (vertebrae) are misshapen and abnormally joined together (fused). The vertebral abnormalities may result in an abnormally curved lower back (lordosis) and a spine that curves to the side (scoliosis).

Disease Ontology : 12 A bone development disease characterized by postnatal progressive vertebral fusions frequently manifesting as block vertebrae, contributing to an undersized trunk and a disproportionate short stature, scoliosis, lordosis, carpal and tarsal synostosis, with club feet and a mild facial dysmorphism that has material basis in mutation in the FLNB gene on chromosome 3p14.3.

Description from OMIM: 272460

Related Diseases for Spondylocarpotarsal Synostosis Syndrome

Diseases related to Spondylocarpotarsal Synostosis Syndrome via text searches within MalaCards or GeneCards Suite gene sharing:

(show top 50) (show all 168)
# Related Disease Score Top Affiliating Genes
1 synostosis 30.2 FLNB MYH3
2 scoliosis 28.9 FLNB MYH3
3 sacrococcygeal teratoma 11.3
4 chediak-higashi syndrome 11.2
5 scott syndrome 11.2
6 pancreatic cancer 11.1
7 multiple endocrine neoplasia, type i 11.0
8 exocrine pancreatic insufficiency 11.0
9 insulinoma 11.0
10 zollinger-ellison syndrome 11.0
11 pervasive developmental disorder 11.0
12 steatorrhea 11.0
13 duodenal ulcer 11.0
14 acute pancreatitis 11.0
15 pancreatitis 11.0
16 gastrinoma 11.0
17 autism 10.9
18 cystic fibrosis 10.9
19 cholangiocarcinoma 10.9
20 dumping syndrome 10.9
21 angiodysplasia 10.9
22 duodenogastric reflux 10.9
23 biliary dyskinesia 10.9
24 alcoholic pancreatitis 10.9
25 vipoma 10.9
26 peptic ulcer disease 10.9
27 gastrointestinal system disease 10.9
28 glucagonoma 10.9
29 recurrent acute pancreatitis 10.9
30 larsen syndrome 10.9
31 metaphyseal chondrodysplasia, jansen type 10.9
32 duodenal atresia 10.9
33 pancreatic agenesis 1 10.9
34 hyperinsulinemic hypoglycemia, familial, 2 10.9
35 hyperproinsulinemia 10.9
36 diphyllobothriasis 10.9
37 pancreatic steatorrhea 10.9
38 giardiasis 10.9
39 pancreas disease 10.9
40 duodenal disease 10.9
41 pancreatic gastrinoma 10.9
42 pancreatic cholera 10.9
43 duodenal gastrinoma 10.9
44 endocrine gland cancer 10.7
45 leukemia 10.2
46 lymphoma 10.2
47 bronchiolitis obliterans 10.1
48 bronchiolitis 10.1
49 amyloidosis 10.1
50 aplastic anemia 10.1

Graphical network of the top 20 diseases related to Spondylocarpotarsal Synostosis Syndrome:



Diseases related to Spondylocarpotarsal Synostosis Syndrome

Symptoms & Phenotypes for Spondylocarpotarsal Synostosis Syndrome

Symptoms via clinical synopsis from OMIM:

57
Head And Neck Eyes:
hypertelorism
cataract
rarefaction of retinal pigmentation
narrowing of retinal vessels

Skeletal Spine:
scoliosis
block vertebrae
lordosis
odontoid hypoplasia
fusion of vertebral bodies
more
Skeletal Feet:
pes planus
tarsal synostosis
club foot

Head And Neck Mouth:
cleft palate

Head And Neck Ears:
preauricular skin tag
sensorineural hearing loss
mixed hearing loss

Genitourinary Kidneys:
renal cysts

Respiratory Lung:
restrictive lung disease

Neurologic Central Nervous System:
mild developmental delay

Skeletal Pelvis:
bilateral proximal femoral epiphyseal dysplasia
sacral anomaly

Head And Neck Neck:
short neck

Genitourinary External Genitalia Male:
inguinal hernia

Head And Neck Nose:
short nose
anteverted nares
broad, square nasal tip

Skeletal Hands:
brachydactyly
fifth finger clinodactyly
carpal synostosis (especially capitate-hamate and lunate-triquetrum)

Skeletal:
delayed bone age

Head And Neck Teeth:
enamel hypoplasia

Growth Height:
short stature, disproportionate (short trunk)

Head And Neck Face:
round, broad face

Skeletal Limbs:
decreased range of motion at elbows
bowed humerus


Clinical features from OMIM:

272460

Human phenotypes related to Spondylocarpotarsal Synostosis Syndrome:

32 (show all 28)
# Description HPO Frequency HPO Source Accession
1 hypertelorism 32 HP:0000316
2 short neck 32 HP:0000470
3 scoliosis 32 HP:0002650
4 hyperlordosis 32 HP:0003307
5 cataract 32 HP:0000518
6 delayed skeletal maturation 32 HP:0002750
7 pes planus 32 HP:0001763
8 short nose 32 HP:0003196
9 sensorineural hearing impairment 32 HP:0000407
10 abnormality of retinal pigmentation 32 very rare (1%) HP:0007703
11 cleft palate 32 HP:0000175
12 epiphyseal dysplasia 32 HP:0002656
13 disproportionate short-trunk short stature 32 HP:0003521
14 clinodactyly of the 5th finger 32 HP:0004209
15 broad nasal tip 32 HP:0000455
16 abnormality of pelvic girdle bone morphology 32 HP:0002644
17 preauricular skin tag 32 HP:0000384
18 block vertebrae 32 HP:0003305
19 tarsal synostosis 32 HP:0008368
20 capitate-hamate fusion 32 HP:0001241
21 hypoplasia of the odontoid process 32 HP:0003311
22 renal cyst 32 HP:0000107
23 restrictive ventilatory defect 32 HP:0002091
24 hypoplasia of dental enamel 32 HP:0006297
25 carpal synostosis 32 HP:0009702
26 mixed hearing impairment 32 HP:0000410
27 broad face 32 HP:0000283
28 c2-c3 subluxation 32 HP:0008456

Drugs & Therapeutics for Spondylocarpotarsal Synostosis Syndrome

Search Clinical Trials , NIH Clinical Center for Spondylocarpotarsal Synostosis Syndrome

Genetic Tests for Spondylocarpotarsal Synostosis Syndrome

Genetic tests related to Spondylocarpotarsal Synostosis Syndrome:

# Genetic test Affiliating Genes
1 Spondylocarpotarsal Synostosis Syndrome 29 FLNB

Anatomical Context for Spondylocarpotarsal Synostosis Syndrome

MalaCards organs/tissues related to Spondylocarpotarsal Synostosis Syndrome:

41
Bone, Eye, Lung, Skin

Publications for Spondylocarpotarsal Synostosis Syndrome

Articles related to Spondylocarpotarsal Synostosis Syndrome:

(show all 17)
# Title Authors Year
1
Recessive Spondylocarpotarsal Synostosis Syndrome Due to Compound Heterozygosity for Variants in MYH3. ( 29805041 )
2018
2
Seven additional families with spondylocarpotarsal synostosis syndrome with novel biallelic deleterious variants in FLNB. ( 29566257 )
2018
3
Spondylocarpotarsal synostosis syndrome. A rare case of short stature and congenital scoliosis. ( 29263747 )
2017
4
Filamin B Loss-of-Function Mutation in Dimerization Domain Causes Autosomal-Recessive Spondylocarpotarsal Synostosis Syndrome with Rib Anomalies. ( 28145000 )
2017
5
Protein-altering MYH3 variants are associated with a spectrum of phenotypes extending to spondylocarpotarsal synostosis syndrome. ( 27381093 )
2016
6
Urolithiasis in a child with Spondylocarpotarsal Synostosis Syndrome: A Co-Incidence. ( 24179936 )
2013
7
Fetal alcohol syndrome: a phenocopy of spondylocarpotarsal synostosis syndrome? ( 20717009 )
2010
8
Expanded clinical spectrum of spondylocarpotarsal synostosis syndrome and possible manifestation in a heterozygous father. ( 18257094 )
2008
9
Disruption of the Flnb gene in mice phenocopies the human disease spondylocarpotarsal synostosis syndrome. ( 17635842 )
2008
10
Autosomal dominant spondylocarpotarsal synostosis syndrome: phenotypic homogeneity and genetic heterogeneity. ( 18470895 )
2008
11
Atlanto-axial rotatory fixation in a girl with Spondylocarpotarsal synostosis syndrome. ( 17042937 )
2006
12
Spondylocarpotarsal synostosis syndrome: MRI evaluation of vertebral and disk malformation. ( 16761119 )
2006
13
Spondylocarpotarsal synostosis syndrome (with a posterior midline unsegmented bar). ( 15891931 )
2005
14
A locus for spondylocarpotarsal synostosis syndrome at chromosome 3p14. ( 15060099 )
2004
15
Spondylocarpotarsal synostosis syndrome and cervical instability. ( 10766994 )
2000
16
Three new cases of spondylocarpotarsal synostosis syndrome: clinical and radiographic studies. ( 9557886 )
1998
17
Spondylocarpotarsal synostosis syndrome (with or without unilateral unsegmented bar). ( 8030662 )
1994

Variations for Spondylocarpotarsal Synostosis Syndrome

ClinVar genetic disease variations for Spondylocarpotarsal Synostosis Syndrome:

6
(show all 16)
# Gene Variation Type Significance SNP ID Assembly Location
1 FLNB NM_001457.3(FLNB): c.6408delC (p.Ser2137Leufs) deletion Pathogenic rs80356521 GRCh37 Chromosome 3, 58139142: 58139142
2 FLNB NM_001457.3(FLNB): c.6408delC (p.Ser2137Leufs) deletion Pathogenic rs80356521 GRCh38 Chromosome 3, 58153415: 58153415
3 FLNB NM_001457.3(FLNB): c.2452C> T (p.Arg818Ter) single nucleotide variant Pathogenic rs80356519 GRCh37 Chromosome 3, 58095865: 58095865
4 FLNB NM_001457.3(FLNB): c.2452C> T (p.Arg818Ter) single nucleotide variant Pathogenic rs80356519 GRCh38 Chromosome 3, 58110138: 58110138
5 FLNB NM_001457.3(FLNB): c.4819C> T (p.Arg1607Ter) single nucleotide variant Pathogenic rs80356520 GRCh37 Chromosome 3, 58121853: 58121853
6 FLNB NM_001457.3(FLNB): c.4819C> T (p.Arg1607Ter) single nucleotide variant Pathogenic rs80356520 GRCh38 Chromosome 3, 58136126: 58136126
7 FLNB NM_001457.3(FLNB): c.6010C> T (p.Arg2004Ter) single nucleotide variant Pathogenic rs121908897 GRCh37 Chromosome 3, 58134498: 58134498
8 FLNB NM_001457.3(FLNB): c.6010C> T (p.Arg2004Ter) single nucleotide variant Pathogenic rs121908897 GRCh38 Chromosome 3, 58148771: 58148771
9 FLNB NM_001457.3(FLNB): c.5548G> T (p.Gly1850Ter) single nucleotide variant Pathogenic rs121908898 GRCh37 Chromosome 3, 58131770: 58131770
10 FLNB NM_001457.3(FLNB): c.5548G> T (p.Gly1850Ter) single nucleotide variant Pathogenic rs121908898 GRCh38 Chromosome 3, 58146043: 58146043
11 FLNB NM_001457.3(FLNB): c.1945C> T (p.Arg649Ter) single nucleotide variant Pathogenic rs80356517 GRCh37 Chromosome 3, 58094188: 58094188
12 FLNB NM_001457.3(FLNB): c.1945C> T (p.Arg649Ter) single nucleotide variant Pathogenic rs80356517 GRCh38 Chromosome 3, 58108461: 58108461
13 FLNB NM_001457.3(FLNB): c.7029T> G (p.Tyr2343Ter) single nucleotide variant Pathogenic rs80356518 GRCh37 Chromosome 3, 58148888: 58148888
14 FLNB NM_001457.3(FLNB): c.7029T> G (p.Tyr2343Ter) single nucleotide variant Pathogenic rs80356518 GRCh38 Chromosome 3, 58163161: 58163161
15 FLNB NM_001457.3(FLNB): c.6616G> T (p.Gly2206Ter) single nucleotide variant Pathogenic rs886043158 GRCh37 Chromosome 3, 58139350: 58139350
16 FLNB NM_001457.3(FLNB): c.6616G> T (p.Gly2206Ter) single nucleotide variant Pathogenic rs886043158 GRCh38 Chromosome 3, 58153623: 58153623

Expression for Spondylocarpotarsal Synostosis Syndrome

Search GEO for disease gene expression data for Spondylocarpotarsal Synostosis Syndrome.

Pathways for Spondylocarpotarsal Synostosis Syndrome

GO Terms for Spondylocarpotarsal Synostosis Syndrome

Biological processes related to Spondylocarpotarsal Synostosis Syndrome according to GeneCards Suite gene sharing:

# Name GO ID Score Top Affiliating Genes
1 muscle organ development GO:0007517 8.62 FLNB MYH3

Molecular functions related to Spondylocarpotarsal Synostosis Syndrome according to GeneCards Suite gene sharing:

# Name GO ID Score Top Affiliating Genes
1 actin binding GO:0003779 8.62 FLNB MYH3

Sources for Spondylocarpotarsal Synostosis Syndrome

3 CDC
7 CNVD
9 Cosmic
10 dbSNP
11 DGIdb
17 ExPASy
19 FMA
28 GO
29 GTR
30 HGMD
31 HMDB
32 HPO
33 ICD10
34 ICD10 via Orphanet
35 ICD9CM
36 IUPHAR
37 KEGG
38 LifeMap
40 LOVD
42 MedGen
44 MeSH
45 MESH via Orphanet
46 MGI
49 NCI
50 NCIt
51 NDF-RT
54 NINDS
55 Novoseek
57 OMIM
58 OMIM via Orphanet
62 PubMed
64 QIAGEN
69 SNOMED-CT via HPO
70 SNOMED-CT via Orphanet
71 TGDB
72 Tocris
73 UMLS
74 UMLS via Orphanet
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