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MCID: SPN028
MIFTS: 47

Spondyloepimetaphyseal Dysplasia, Strudwick Type

Categories: Genetic diseases, Rare diseases, Bone diseases, Fetal diseases
Genes Variations Tissues Related diseases Publications Pathways Symptoms & Phenotypes
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Aliases & Classifications for Spondyloepimetaphyseal Dysplasia, Strudwick Type

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MalaCards integrated aliases for Spondyloepimetaphyseal Dysplasia, Strudwick Type:

Name: Spondyloepimetaphyseal Dysplasia, Strudwick Type 57 12 76 25 75 15
Spondylometaphyseal Dysplasia 57 76 25 75 29 55 6
Strudwick Syndrome 57 76 53 25 75 73
Dappled Metaphysis Syndrome 57 53 25 75
Spondylometaepiphyseal Dysplasia Congenita, Strudwick Type 57 25 75
Semd, Strudwick Type 57 25 75
Smed, Strudwick Type 57 25 75
Smed Strudwick Type 57 53 13
Smd 57 53 75
Smed, Type I 57 25
Smed Type 1 53 75
Semdstwk 57 75
Semdc 57 75
Spondyloepiphyseal Dysplasia Congenita with Dappled Metaphyses 75
Spondyloepimetaphyseal Dysplasia Congenita, Strudwick Type 59
Dysplasia, Spondyloepimetaphyseal, Strudwick Type 40
Spondyloepimetaphyseal Dysplasia Strudwick Type 53
Spondylometaphyseal Dysplasia; Smd 57
Dysplasia, Spondylometaphyseal 40
Sed Strudwick 25
Smed Type I 75

Characteristics:

Orphanet epidemiological data:

59
spondyloepimetaphyseal dysplasia congenita, strudwick type
Inheritance: Autosomal dominant; Prevalence: <1/1000000 (Worldwide);

OMIM:

57
Inheritance:
autosomal dominant


HPO:

32
spondyloepimetaphyseal dysplasia, strudwick type:
Inheritance autosomal dominant inheritance


Classifications:

MalaCards categories:
Global: Genetic diseases Rare diseases Fetal diseases
Anatomical: Bone diseases
See all MalaCards categories (disease lists)
ICD10: 34
Orphanet: 59  
Rare bone diseases
Developmental anomalies during embryogenesis


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Summaries for Spondyloepimetaphyseal Dysplasia, Strudwick Type

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NIH Rare Diseases : 53 The following summary is from Orphanet, a European reference portal for information on rare diseases and orphan drugs.Orpha Number: 93346Disease definitionSpondyloepimetaphyseal dysplasia congenita, Strudwick type is characterized by disproportionate short stature from birth (with a very short trunk and shortened limbs) and skeletal abnormalities (lordosis, scoliosis, flattened vertebrae, pectus carinatum, coxa vara, clubfoot, and abnormal epiphyses or metaphyses).EpidemiologyThe syndrome has been described in less than 30 patients so far.Clinical descriptionCleft palate and eye abnormalities (severe myopia and retinal detachment) are frequently associated. Arthritis may develop early in life.EtiologyThis condition is caused by mutations in the COL2A1 gene (12q13.11-q13.2).Genetic counselingIt is inherited in an autosomal dominant manner.Visit the Orphanet disease page for more resources.

MalaCards based summary : Spondyloepimetaphyseal Dysplasia, Strudwick Type, also known as spondylometaphyseal dysplasia, is related to spondylometaphyseal dysplasia, corner fracture type and spondyloepimetaphyseal dysplasia, matrilin-3 related. An important gene associated with Spondyloepimetaphyseal Dysplasia, Strudwick Type is COL2A1 (Collagen Type II Alpha 1 Chain), and among its related pathways/superpathways are Degradation of the extracellular matrix and Phospholipase-C Pathway. Affiliated tissues include bone and eye, and related phenotypes are hypertelorism and osteoarthritis

Disease Ontology : 12 A spondyloepimetaphyseal dysplasia that has material basis in mutations in the COL2A1 gene which results in short stature and multiple skeletal abnormalities (lordosis, scoliosis, flattened vertebrae, pectus carinatum, coxa vara, clubfoot, and abnormal epiphyses or metaphyses).

Genetics Home Reference : 25 Spondyloepimetaphyseal dysplasia, Strudwick type is an inherited disorder of bone growth that results in short stature (dwarfism), skeletal abnormalities, and problems with vision. This condition affects the bones of the spine (spondylo-) and two regions (epiphyses and metaphyses) near the ends of long bones in the arms and legs. The Strudwick type was named after the first reported patient with the disorder.

OMIM : 57 The Strudwick type of spondyloepimetaphyseal dysplasia (SEMD) is characterized by disproportionate short stature, pectus carinatum, and scoliosis, as well as dappled metaphyses (summary by Tiller et al., 1995). (184250)

UniProtKB/Swiss-Prot : 75 Spondyloepimetaphyseal dysplasia, Strudwick type: A bone disease characterized by disproportionate short stature from birth, with a very short trunk and shortened limbs, and skeletal abnormalities including lordosis, scoliosis, flattened vertebrae, pectus carinatum, coxa vara, clubfoot, and abnormal epiphyses or metaphyses. A distinctive radiographic feature is irregular sclerotic changes, described as dappled in the metaphyses of the long bones.

Wikipedia : 76 Spondyloepimetaphyseal dysplasia, Strudwick type is an inherited disorder of bone growth that results in... more...

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Related Diseases for Spondyloepimetaphyseal Dysplasia, Strudwick Type

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Diseases related to Spondyloepimetaphyseal Dysplasia, Strudwick Type via text searches within MalaCards or GeneCards Suite gene sharing:

(show all 18)
# Related Disease Score Top Affiliating Genes
1 spondylometaphyseal dysplasia, corner fracture type 33.7 COL2A1 FN1
2 spondyloepimetaphyseal dysplasia, matrilin-3 related 30.5 COL2A1 SEMA3A
3 spondylometaphyseal dysplasia, axial 12.6
4 spondylometaphyseal dysplasia, sedaghatian type 11.3
5 retinal detachment 10.2
6 retinitis 10.2
7 dysspondyloenchondromatosis 10.2
8 epiphyseal dysplasia, multiple, with myopia and conductive deafness 10.0 COL2A1 LOC105369752
9 spondyloperipheral dysplasia 10.0 COL2A1 LOC105369752
10 osteoarthritis with mild chondrodysplasia 10.0 COL2A1 LOC105369752
11 kniest dysplasia 9.7 COL2A1 SEMA3A
12 coxa vara 9.6 COL10A1 COL2A1
13 cartilage disease 9.6 COL10A1 COL2A1
14 achondrogenesis, type ii 9.5 COL2A1 LOC105369752 SEMA3A
15 hypochondrogenesis 9.5 COL2A1 LOC105369752 SEMA3A
16 pyle disease 9.4 COL10A1 COL2A1
17 spondyloepiphyseal dysplasia congenita 9.1 COL10A1 COL2A1 SEMA3A
18 bone disease 9.1 COL10A1 COL2A1

Graphical network of the top 20 diseases related to Spondyloepimetaphyseal Dysplasia, Strudwick Type:



Diseases related to Spondyloepimetaphyseal Dysplasia, Strudwick Type
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Symptoms & Phenotypes for Spondyloepimetaphyseal Dysplasia, Strudwick Type

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Symptoms via clinical synopsis from OMIM:

57
Skeletal Spine:
scoliosis
platyspondyly
lordosis
odontoid hypoplasia
c1-c2 subluxation

Chest External Features:
pectus carinatum

Head And Neck Mouth:
cleft palate

Skeletal Hands:
brachydactyly

Abdomen External Features:
protuberant abdomen

Skeletal Limbs:
genu valga
generalized epiphyseal delay (infancy)
metaphyseal irregularity and sclerosis (childhood)
club-shaped proximal femurs (infancy)
dappled metaphyses (proximal femora, proximal humeri, distal radii, distal ulnae, and proximal and distal tibiae and fibulae)
more
Chest Ribs Sternum Clavicles And Scapulae:
anteriorly splayed ribs

Genitourinary External Genitalia Male:
inguinal hernia

Skeletal Feet:
pes planus

Head And Neck Eyes:
myopia

Skeletal Pelvis:
coxa vara
delayed pubic bone ossification
hypoplastic pubic bones
narrow sacrosciatic notches

Neurologic:
normal intelligence

Growth Height:
dwarfism, short-trunk, short-limbed


Clinical features from OMIM:

184250

Human phenotypes related to Spondyloepimetaphyseal Dysplasia, Strudwick Type:

59 32 (show all 41)
# Description HPO Frequency Orphanet Frequency HPO Source Accession
1 hypertelorism 59 32 frequent (33%) Frequent (79-30%) HP:0000316
2 osteoarthritis 59 32 frequent (33%) Frequent (79-30%) HP:0002758
3 genu valgum 59 32 frequent (33%) Frequent (79-30%) HP:0002857
4 abnormality of epiphysis morphology 59 32 hallmark (90%) Very frequent (99-80%) HP:0005930
5 gait disturbance 59 32 hallmark (90%) Frequent (79-30%) HP:0001288
6 scoliosis 59 32 occasional (7.5%) Occasional (29-5%) HP:0002650
7 kyphosis 59 32 frequent (33%) Frequent (79-30%) HP:0002808
8 hyperlordosis 59 32 hallmark (90%) Very frequent (99-80%) HP:0003307
9 cleft palate 59 32 frequent (33%) Frequent (79-30%) HP:0000175
10 abnormality of the metaphysis 59 32 hallmark (90%) Very frequent (99-80%) HP:0000944
11 platyspondyly 59 32 hallmark (90%) Very frequent (99-80%) HP:0000926
12 respiratory distress 59 32 occasional (7.5%) Occasional (29-5%) HP:0002098
13 micromelia 59 32 hallmark (90%) Very frequent (99-80%) HP:0002983
14 short thorax 59 32 hallmark (90%) Very frequent (99-80%) HP:0010306
15 flat face 59 32 frequent (33%) Frequent (79-30%) HP:0012368
16 myopia 59 32 frequent (33%) Frequent (79-30%) HP:0000545
17 retinal detachment 59 32 frequent (33%) Frequent (79-30%) HP:0000541
18 talipes equinovarus 59 32 occasional (7.5%) Occasional (29-5%) HP:0001762
19 genu varum 59 32 occasional (7.5%) Occasional (29-5%) HP:0002970
20 coxa vara 59 32 frequent (33%) Frequent (79-30%) HP:0002812
21 abnormality of the sternum 59 32 hallmark (90%) Very frequent (99-80%) HP:0000766
22 hypoplasia of the odontoid process 59 32 occasional (7.5%) Occasional (29-5%) HP:0003311
23 disproportionate short stature 59 32 hallmark (90%) Very frequent (99-80%) HP:0003498
24 short femoral neck 59 32 frequent (33%) Frequent (79-30%) HP:0100864
25 spondyloepimetaphyseal dysplasia 59 32 hallmark (90%) Very frequent (99-80%) HP:0002651
26 inguinal hernia 32 HP:0000023
27 hip dysplasia 32 hallmark (90%) HP:0001385
28 pectus carinatum 32 HP:0000768
29 pes planus 32 HP:0001763
30 rhizomelia 32 hallmark (90%) HP:0008905
31 brachydactyly 32 HP:0001156
32 severe short stature 32 HP:0003510
33 hypoplastic pubic bone 32 HP:0003173
34 anterior rib cupping 32 HP:0000907
35 protuberant abdomen 32 HP:0001538
36 delayed pubic bone ossification 32 HP:0008788
37 metaphyseal irregularity 32 HP:0003025
38 c1-c2 subluxation 32 HP:0003320
39 club-shaped proximal femur 32 HP:0006406
40 narrow greater sacrosciatic notches 32 HP:0003375
41 metaphyseal dappling 32 HP:0011860

MGI Mouse Phenotypes related to Spondyloepimetaphyseal Dysplasia, Strudwick Type:

46
# Description MGI Source Accession Score Top Affiliating Genes
1 limbs/digits/tail MP:0005371 9.13 COL10A1 COL2A1 FN1
2 skeleton MP:0005390 8.92 COL10A1 COL2A1 FN1 SEMA3A
Sources

Drugs & Therapeutics for Spondyloepimetaphyseal Dysplasia, Strudwick Type

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Search Clinical Trials , NIH Clinical Center for Spondyloepimetaphyseal Dysplasia, Strudwick Type

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Genetic Tests for Spondyloepimetaphyseal Dysplasia, Strudwick Type

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Genetic tests related to Spondyloepimetaphyseal Dysplasia, Strudwick Type:

# Genetic test Affiliating Genes
1 Spondylometaphyseal Dysplasia 29 COL2A1
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Anatomical Context for Spondyloepimetaphyseal Dysplasia, Strudwick Type

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MalaCards organs/tissues related to Spondyloepimetaphyseal Dysplasia, Strudwick Type:

41
Bone, Eye
Sources

Publications for Spondyloepimetaphyseal Dysplasia, Strudwick Type

About this section

Articles related to Spondyloepimetaphyseal Dysplasia, Strudwick Type:

(show all 38)
# Title Authors Year
1
Defect in phosphoinositide signalling through a homozygous variant in<i>PLCB3</i>causes a new form of spondylometaphyseal dysplasia with corneal dystrophy. ( 29122926 )
2018
2
Axial spondylometaphyseal dysplasia is also caused by NEK1 mutations. ( 28123176 )
2017
3
Mutations in Fibronectin Cause a Subtype of Spondylometaphyseal Dysplasia with &amp;quot;Corner Fractures&amp;quot;. ( 29100092 )
2017
4
Axial Spondylometaphyseal Dysplasia Is Caused by C21orf2 Mutations. ( 26974433 )
2016
5
Corner fracture type spondylometaphyseal dysplasia: Overlap with type II collagenopathies. ( 27888646 )
2016
6
Dysspondyloenchondromatosis (DSC) associated with COL2A1 mutation: Clinical and radiological overlap with spondyloepimetaphyseal dysplasia-Strudwick type (SEMD-S). ( 26250472 )
2015
7
Mutations in PCYT1A Cause Spondylometaphyseal Dysplasia with Cone-Rod Dystrophy. ( 24387991 )
2014
8
Novel mutations in PCYT1A are responsible for spondylometaphyseal dysplasia with cone-rod dystrophy. ( 24476460 )
2014
9
BILATERAL RHEGMATOGENOUS RETINAL DETACHMENT IN SPONDYLOEPIMETAPHYSEAL DYSPLASIA-STRUDWICK TYPE. ( 25383842 )
2014
10
Mutations in PCYT1A, Encoding a Key Regulator of Phosphatidylcholine Metabolism, Cause Spondylometaphyseal Dysplasia with Cone-Rod Dystrophy. ( 24387990 )
2014
11
Mutations in the enzyme glutathione peroxidase 4 cause Sedaghatian- type spondylometaphyseal dysplasia. ( 24706940 )
2014
12
COL2A1 Mutation in Spondylometaphyseal Dysplasia Algerian Type. ( 23653587 )
2013
13
Axial spondylometaphyseal dysplasia with retinitis pigmentosa--a clinical report and diagnostic clues. ( 23371363 )
2013
14
Simplified gyral pattern with cerebellar hypoplasia in Sedaghatian type spondylometaphyseal dysplasia: a clinical report and review of the literature. ( 22529034 )
2012
15
Spondylometaphyseal dysplasia with cone-rod dystrophy. ( 21412974 )
2011
16
Axial spondylometaphyseal dysplasia: additional reports. ( 21910225 )
2011
17
Spondylometaphyseal dysplasia with cone-rod dystrophy. ( 20141353 )
2010
18
Axial spondylometaphyseal dysplasia: Confirmation and further delineation of a new SMD with retinal dystrophy. ( 20503334 )
2010
19
Mutations in the gene encoding the calcium-permeable ion channel TRPV4 produce spondylometaphyseal dysplasia, Kozlowski type and metatropic dysplasia. ( 19232556 )
2009
20
Severe neonatal spondylometaphyseal dysplasia in two siblings. ( 19764033 )
2009
21
Further delineation of spondylometaphyseal dysplasia with cone-rod dystrophy. ( 19012331 )
2008
22
Spondylometaphyseal dysplasia-Sedaghatian type associated with intra-partum cardiac arrhythmia and neonatal death. ( 18097914 )
2007
23
Sedaghatian spondylometaphyseal dysplasia with pachygyria and absence of the corpus callosum. ( 16892303 )
2006
24
Kozlowski type spondylometaphyseal dysplasia: a case report with literature review. ( 16752352 )
2006
25
Orthopaedic manifestations and management of spondyloepimetaphyseal dysplasia Strudwick type. ( 16280719 )
2006
26
A dominantly inherited spondylometaphyseal dysplasia with &amp;quot;corner fractures&amp;quot; and congenital scoliosis. ( 15666313 )
2005
27
Spondylometaphyseal dysplasia with cone-rod dystrophy. ( 15326626 )
2004
28
Spondylometaphyseal dysplasia: Sedaghatian type. ( 10678656 )
2000
29
Schmid type metaphyseal chondrodysplasia: a spondylometaphyseal dysplasia identical to the &amp;quot;Japanese&amp;quot; type. ( 10929364 )
2000
30
Spondylometaphyseal dysplasia Sedaghatian type associated with lethal arrhythmia and normal intrauterine growth in three siblings. ( 10955475 )
2000
31
Spondylometaphyseal dysplasia-Sedaghatian type. ( 9556300 )
1998
32
Mutation of the type X collagen gene 'COL10A1' causes spondylometaphyseal dysplasia. ( 9837818 )
1998
33
Axial spondylometaphyseal dysplasia. ( 9266195 )
1997
34
Dominant mutations in the type II collagen gene, COL2A1, produce spondyloepimetaphyseal dysplasia, Strudwick type. ( 7550321 )
1995
35
Spondylometaphyseal dysplasia in mice carrying a dominant negative mutation in a matrix protein specific for cartilage-to-bone transition. ( 8361538 )
1993
36
Spondylometaphyseal dysplasia (Kozlowski type): case report. ( 8233993 )
1993
37
Spondylometaphyseal dysplasia, Sedaghatian type. ( 1481828 )
1992
38
Spondylometaphyseal dysplasia, corner fracture type: a heritable condition associated with coxa vara. ( 2343127 )
1990
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Variations for Spondyloepimetaphyseal Dysplasia, Strudwick Type

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UniProtKB/Swiss-Prot genetic disease variations for Spondyloepimetaphyseal Dysplasia, Strudwick Type:

75
# Symbol AA change Variation ID SNP ID
1 COL2A1 p.Gly492Val VAR_001745 rs121912881
2 COL2A1 p.Gly504Cys VAR_001746 rs121912880
3 COL2A1 p.Gly909Cys VAR_001753 rs121912875
4 COL2A1 p.Gly897Val VAR_023931
5 COL2A1 p.Arg992Gly VAR_023932 rs121912895

ClinVar genetic disease variations for Spondyloepimetaphyseal Dysplasia, Strudwick Type:

6
(show top 50) (show all 142)
# Gene Variation Type Significance SNP ID Assembly Location
1 COL2A1 NM_001844.4(COL2A1): c.1060G> A (p.Gly354Arg) single nucleotide variant Pathogenic rs121912871 GRCh37 Chromosome 12, 48383552: 48383552
2 COL2A1 NM_001844.4(COL2A1): c.1060G> A (p.Gly354Arg) single nucleotide variant Pathogenic rs121912871 GRCh38 Chromosome 12, 47989769: 47989769
3 COL2A1 NM_001844.4(COL2A1): c.2725G> T (p.Gly909Cys) single nucleotide variant Pathogenic rs121912875 GRCh37 Chromosome 12, 48373302: 48373302
4 COL2A1 NM_001844.4(COL2A1): c.2725G> T (p.Gly909Cys) single nucleotide variant Pathogenic rs121912875 GRCh38 Chromosome 12, 47979519: 47979519
5 COL2A1 NM_001844.4(COL2A1): c.1510G> T (p.Gly504Cys) single nucleotide variant Pathogenic rs121912880 GRCh37 Chromosome 12, 48380136: 48380136
6 COL2A1 NM_001844.4(COL2A1): c.1510G> T (p.Gly504Cys) single nucleotide variant Pathogenic rs121912880 GRCh38 Chromosome 12, 47986353: 47986353
7 COL2A1 NM_001844.4(COL2A1): c.1475G> T (p.Gly492Val) single nucleotide variant Pathogenic rs121912881 GRCh37 Chromosome 12, 48380171: 48380171
8 COL2A1 NM_001844.4(COL2A1): c.1475G> T (p.Gly492Val) single nucleotide variant Pathogenic rs121912881 GRCh38 Chromosome 12, 47986388: 47986388
9 COL2A1 NM_001844.4(COL2A1): c.2974A> G (p.Arg992Gly) single nucleotide variant Pathogenic rs121912895 GRCh37 Chromosome 12, 48372103: 48372103
10 COL2A1 NM_001844.4(COL2A1): c.2974A> G (p.Arg992Gly) single nucleotide variant Pathogenic rs121912895 GRCh38 Chromosome 12, 47978320: 47978320
11 TRPV4 NM_021625.4(TRPV4): c.1684G> A (p.Val562Ile) single nucleotide variant Benign/Likely benign rs56177950 GRCh37 Chromosome 12, 110230597: 110230597
12 TRPV4 NM_021625.4(TRPV4): c.1684G> A (p.Val562Ile) single nucleotide variant Benign/Likely benign rs56177950 GRCh38 Chromosome 12, 109792792: 109792792
13 TRPV4 NM_021625.4(TRPV4): c.33G> T (p.Gly11=) single nucleotide variant Benign/Likely benign rs56092423 GRCh37 Chromosome 12, 110252569: 110252569
14 TRPV4 NM_021625.4(TRPV4): c.33G> T (p.Gly11=) single nucleotide variant Benign/Likely benign rs56092423 GRCh38 Chromosome 12, 109814764: 109814764
15 COL2A1 NM_001844.4(COL2A1): c.1510G> A (p.Gly504Ser) single nucleotide variant Pathogenic rs121912880 GRCh37 Chromosome 12, 48380136: 48380136
16 COL2A1 NM_001844.4(COL2A1): c.1510G> A (p.Gly504Ser) single nucleotide variant Pathogenic rs121912880 GRCh38 Chromosome 12, 47986353: 47986353
17 TRPV4 NM_021625.4(TRPV4): c.854-4G> A single nucleotide variant Conflicting interpretations of pathogenicity rs371733585 GRCh37 Chromosome 12, 110236721: 110236721
18 TRPV4 NM_021625.4(TRPV4): c.854-4G> A single nucleotide variant Conflicting interpretations of pathogenicity rs371733585 GRCh38 Chromosome 12, 109798916: 109798916
19 TRPV4 NM_021625.4(TRPV4): c.2605G> A (p.Ala869Thr) single nucleotide variant Uncertain significance rs138396764 GRCh38 Chromosome 12, 109783632: 109783632
20 TRPV4 NM_021625.4(TRPV4): c.2605G> A (p.Ala869Thr) single nucleotide variant Uncertain significance rs138396764 GRCh37 Chromosome 12, 110221437: 110221437
21 TRPV4 NM_021625.4(TRPV4): c.2498A> G (p.Asn833Ser) single nucleotide variant Benign/Likely benign rs116035946 GRCh38 Chromosome 12, 109783739: 109783739
22 TRPV4 NM_021625.4(TRPV4): c.2498A> G (p.Asn833Ser) single nucleotide variant Benign/Likely benign rs116035946 GRCh37 Chromosome 12, 110221544: 110221544
23 TRPV4 NM_021625.4(TRPV4): c.2248G> A (p.Val750Ile) single nucleotide variant Likely benign rs148171058 GRCh38 Chromosome 12, 109786798: 109786798
24 TRPV4 NM_021625.4(TRPV4): c.2248G> A (p.Val750Ile) single nucleotide variant Likely benign rs148171058 GRCh37 Chromosome 12, 110224603: 110224603
25 TRPV4 NM_021625.4(TRPV4): c.1546A> G (p.Ile516Val) single nucleotide variant Likely benign rs115976458 GRCh38 Chromosome 12, 109793968: 109793968
26 TRPV4 NM_021625.4(TRPV4): c.1546A> G (p.Ile516Val) single nucleotide variant Likely benign rs115976458 GRCh37 Chromosome 12, 110231773: 110231773
27 TRPV4 NM_021625.4(TRPV4): c.1308C> T (p.Ile436=) single nucleotide variant Benign/Likely benign rs141244183 GRCh38 Chromosome 12, 109796549: 109796549
28 TRPV4 NM_021625.4(TRPV4): c.1308C> T (p.Ile436=) single nucleotide variant Benign/Likely benign rs141244183 GRCh37 Chromosome 12, 110234354: 110234354
29 TRPV4 NM_021625.4(TRPV4): c.769C> G (p.Leu257Val) single nucleotide variant Conflicting interpretations of pathogenicity rs56217500 GRCh38 Chromosome 12, 109800702: 109800702
30 TRPV4 NM_021625.4(TRPV4): c.769C> G (p.Leu257Val) single nucleotide variant Conflicting interpretations of pathogenicity rs56217500 GRCh37 Chromosome 12, 110238507: 110238507
31 TRPV4 NM_021625.4(TRPV4): c.712+10C> T single nucleotide variant Likely benign rs115657305 GRCh38 Chromosome 12, 109802981: 109802981
32 TRPV4 NM_021625.4(TRPV4): c.712+10C> T single nucleotide variant Likely benign rs115657305 GRCh37 Chromosome 12, 110240786: 110240786
33 TRPV4 NM_021625.4(TRPV4): c.152C> T (p.Pro51Leu) single nucleotide variant Benign/Likely benign rs115861965 GRCh37 Chromosome 12, 110252450: 110252450
34 TRPV4 NM_021625.4(TRPV4): c.152C> T (p.Pro51Leu) single nucleotide variant Benign/Likely benign rs115861965 GRCh38 Chromosome 12, 109814645: 109814645
35 TRPV4 NM_021625.4(TRPV4): c.2433G> C (p.Ser811=) single nucleotide variant Benign/Likely benign rs34071623 GRCh38 Chromosome 12, 109784341: 109784341
36 TRPV4 NM_021625.4(TRPV4): c.2433G> C (p.Ser811=) single nucleotide variant Benign/Likely benign rs34071623 GRCh37 Chromosome 12, 110222146: 110222146
37 TRPV4 NM_021625.4(TRPV4): c.810G> A (p.Gly270=) single nucleotide variant Benign/Likely benign rs147558344 GRCh38 Chromosome 12, 109800661: 109800661
38 TRPV4 NM_021625.4(TRPV4): c.810G> A (p.Gly270=) single nucleotide variant Benign/Likely benign rs147558344 GRCh37 Chromosome 12, 110238466: 110238466
39 TRPV4 NM_021625.4(TRPV4): c.1713C> G (p.Ile571Met) single nucleotide variant Benign rs185933892 GRCh38 Chromosome 12, 109792763: 109792763
40 TRPV4 NM_021625.4(TRPV4): c.1713C> G (p.Ile571Met) single nucleotide variant Benign rs185933892 GRCh37 Chromosome 12, 110230568: 110230568
41 TRPV4 NM_021625.4(TRPV4): c.1341C> T (p.His447=) single nucleotide variant Benign/Likely benign rs57316123 GRCh37 Chromosome 12, 110232284: 110232284
42 TRPV4 NM_021625.4(TRPV4): c.1341C> T (p.His447=) single nucleotide variant Benign/Likely benign rs57316123 GRCh38 Chromosome 12, 109794479: 109794479
43 TRPV4 NM_021625.4(TRPV4): c.387-4C> T single nucleotide variant Benign/Likely benign rs12305439 GRCh38 Chromosome 12, 109808472: 109808472
44 TRPV4 NM_021625.4(TRPV4): c.387-4C> T single nucleotide variant Benign/Likely benign rs12305439 GRCh37 Chromosome 12, 110246277: 110246277
45 TRPV4 NM_021625.4(TRPV4): c.81T> C (p.Gly27=) single nucleotide variant Benign rs34599967 GRCh37 Chromosome 12, 110252521: 110252521
46 TRPV4 NM_021625.4(TRPV4): c.81T> C (p.Gly27=) single nucleotide variant Benign rs34599967 GRCh38 Chromosome 12, 109814716: 109814716
47 TRPV4 NM_021625.4(TRPV4): c.1539C> T (p.Gly513=) single nucleotide variant Benign/Likely benign rs141295418 GRCh37 Chromosome 12, 110231780: 110231780
48 TRPV4 NM_021625.4(TRPV4): c.1539C> T (p.Gly513=) single nucleotide variant Benign/Likely benign rs141295418 GRCh38 Chromosome 12, 109793975: 109793975
49 TRPV4 NM_021625.4(TRPV4): c.1390C> T (p.Arg464Cys) single nucleotide variant Uncertain significance rs373049874 GRCh37 Chromosome 12, 110232235: 110232235
50 TRPV4 NM_021625.4(TRPV4): c.1390C> T (p.Arg464Cys) single nucleotide variant Uncertain significance rs373049874 GRCh38 Chromosome 12, 109794430: 109794430
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Expression for Spondyloepimetaphyseal Dysplasia, Strudwick Type

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Search GEO for disease gene expression data for Spondyloepimetaphyseal Dysplasia, Strudwick Type.
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Pathways for Spondyloepimetaphyseal Dysplasia, Strudwick Type

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Pathways related to Spondyloepimetaphyseal Dysplasia, Strudwick Type according to GeneCards Suite gene sharing:

# Super pathways Score Top Affiliating Genes
1
Degradation of the extracellular matrix 66
Show member pathways
 12.09 COL10A1 COL2A1 FN1
2
Phospholipase-C Pathway 64
Show member pathways
 11.81 COL10A1 COL2A1 FN1 SEMA3A
3
ECM-receptor interaction 37
Show member pathways
 11.61 COL2A1 FN1
4
Senescence and Autophagy in Cancer 1
11.43 COL10A1 FN1
5
Endochondral Ossification 1
11.18 COL10A1 COL2A1
6
Cell adhesion_ECM remodeling 22
11.11 COL2A1 FN1
7
Articular Cartilage Extracellular Matrix Pathway 65
10.71 COL2A1 FN1
8
Simplified Interaction Map Between LOXL4 and Oxidative Stress Pathway 1
10.28 COL2A1 FN1
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GO Terms for Spondyloepimetaphyseal Dysplasia, Strudwick Type

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Cellular components related to Spondyloepimetaphyseal Dysplasia, Strudwick Type according to GeneCards Suite gene sharing:

# Name GO ID Score Top Affiliating Genes
1 extracellular region GO:0005576 9.56 COL10A1 COL2A1 FN1 SEMA3A
2 collagen trimer GO:0005581 9.16 COL10A1 COL2A1
3 basement membrane GO:0005604 8.96 COL2A1 FN1
4 endoplasmic reticulum lumen GO:0005788 8.8 COL10A1 COL2A1 FN1

Biological processes related to Spondyloepimetaphyseal Dysplasia, Strudwick Type according to GeneCards Suite gene sharing:

# Name GO ID Score Top Affiliating Genes
1 skeletal system development GO:0001501 9.16 COL10A1 COL2A1
2 collagen catabolic process GO:0030574 8.96 COL10A1 COL2A1
3 extracellular matrix organization GO:0030198 8.8 COL10A1 COL2A1 FN1
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Sources for Spondyloepimetaphyseal Dysplasia, Strudwick Type

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3 CDC
7 CNVD
9 Cosmic
10 dbSNP
11 DGIdb
17 ExPASy
19 FMA
28 GO
29 GTR
30 HGMD
31 HMDB
32 HPO
33 ICD10
34 ICD10 via Orphanet
35 ICD9CM
36 IUPHAR
37 KEGG
38 LifeMap
40 LOVD
42 MedGen
44 MeSH
45 MESH via Orphanet
46 MGI
49 NCI
50 NCIt
51 NDF-RT
54 NINDS
55 Novoseek
57 OMIM
58 OMIM via Orphanet
62 PubMed
64 QIAGEN
69 SNOMED-CT via HPO
70 SNOMED-CT via Orphanet
71 TGDB
72 Tocris
73 UMLS
74 UMLS via Orphanet
The MalaCards human disease database index: 1-9 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
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