XPB
MCID: XRD032
MIFTS: 49

Xeroderma Pigmentosum, Complementation Group B (XPB)

Categories: Cancer diseases, Genetic diseases, Neuronal diseases, Skin diseases

Aliases & Classifications for Xeroderma Pigmentosum, Complementation Group B

MalaCards integrated aliases for Xeroderma Pigmentosum, Complementation Group B:

Name: Xeroderma Pigmentosum, Complementation Group B 56 29 6 39
Xeroderma Pigmentosum, Group B 56 13 71
Xeroderma Pigmentosum Group B 12 15
Xp Group B 12 73
Xpbc 56 12
Xpb 56 12
Xeroderma Pigmentosum Group B with Cockayne Syndrome 73
Xeroderma Pigmentosum Complementation Group B 73
Xeroderma Pigmentosum Ii 73
Xp, Group B; Xpbc 56
Xp, Group B 56
Xp-B/cs 73
Xp-B 73
Xp2 73

Characteristics:

OMIM:

56
Inheritance:
autosomal recessive


HPO:

31
xeroderma pigmentosum, complementation group b:
Inheritance autosomal recessive inheritance


Classifications:



Summaries for Xeroderma Pigmentosum, Complementation Group B

UniProtKB/Swiss-Prot : 73 Xeroderma pigmentosum complementation group B: An autosomal recessive pigmentary skin disorder characterized by solar hypersensitivity of the skin, high predisposition for developing cancers on areas exposed to sunlight and, in some cases, neurological abnormalities. The skin develops marked freckling and other pigmentation abnormalities. Some XP-B patients present features of Cockayne syndrome, including cachectic dwarfism, pigmentary retinopathy, ataxia, decreased nerve conduction velocities. The phenotype combining xeroderma pigmentosum and Cockayne syndrome traits is referred to as XP-CS complex.

MalaCards based summary : Xeroderma Pigmentosum, Complementation Group B, also known as xeroderma pigmentosum, group b, is related to xeroderma pigmentosum, complementation group a and skin carcinoma, and has symptoms including ataxia An important gene associated with Xeroderma Pigmentosum, Complementation Group B is ERCC3 (ERCC Excision Repair 3, TFIIH Core Complex Helicase Subunit), and among its related pathways/superpathways are Gene Expression and Activated PKN1 stimulates transcription of AR (androgen receptor) regulated genes KLK2 and KLK3. Affiliated tissues include skin, lung and breast, and related phenotypes are intellectual disability and hyperreflexia

Disease Ontology : 12 A xeroderma pigmentosum characterized by that has material basis in mutation in the ERCC3 gene on chromosome 2q14.

OMIM : 56 For a general discussion of xeroderma pigmentosum, see XPA (278700), and of Cockayne syndrome, see CSA (216400). Cleaver (1990) provided a review of the causes of xeroderma pigmentosum. (610651)

Related Diseases for Xeroderma Pigmentosum, Complementation Group B

Diseases in the Xeroderma Pigmentosum, Complementation Group a family:

Xeroderma Pigmentosum, Complementation Group C Xeroderma Pigmentosum, Complementation Group D
Xeroderma Pigmentosum, Complementation Group E Xeroderma Pigmentosum, Complementation Group F
Xeroderma Pigmentosum, Complementation Group G Xeroderma Pigmentosum, Complementation Group B

Diseases related to Xeroderma Pigmentosum, Complementation Group B via text searches within MalaCards or GeneCards Suite gene sharing:

(show all 50)
# Related Disease Score Top Affiliating Genes
1 xeroderma pigmentosum, complementation group a 31.1 XPA RAD23B H2AC18 ERCC6 ERCC4 ERCC2
2 skin carcinoma 30.4 XPA H2AC18 ERCC6 ERCC3 ERCC2 DDB2
3 xeroderma pigmentosum-cockayne syndrome complex 30.2 ERCC5 ERCC4 ERCC3 ERCC2
4 cockayne syndrome b 30.1 ERCC6 ERCC1
5 autosomal recessive disease 29.9 XPA H2AC18 GTF2H5 ERCC6 ERCC3 ERCC2
6 xeroderma pigmentosum, complementation group f 29.0 XPA RAD23B ERCC6 ERCC5 ERCC4 ERCC3
7 xeroderma pigmentosum, complementation group c 28.6 XPA RAD23B H2AC18 GTF2H3 GTF2H1 ERCC6
8 trichothiodystrophy 1, photosensitive 28.6 XPA RAD23B H2AC18 GTF2H5 GTF2H4 GTF2H3
9 cockayne syndrome 27.8 XPA GTF2H4 GTF2H3 GTF2H2 GTF2H1 ERCC6
10 xeroderma pigmentosum, complementation group g 26.8 XPA RAD23B H2AC18 GTF2H5 GTF2H4 GTF2H3
11 xeroderma pigmentosum, variant type 26.8 XPA RAD23B H2AC18 GTF2H5 GTF2H4 GTF2H3
12 obsolete: xeroderma pigmentosum complementation group b 12.7
13 nonphotosensitive trichothiodystrophy 10.4 GTF2H5 ERCC3
14 leukemia, acute lymphoblastic 10.3
15 lymphocytic leukemia 10.3
16 ovarian cancer 10.2
17 mutagen sensitivity 10.2 XPA RAD23B ERCC2
18 lung cancer 10.2
19 ovarian epithelial cancer 10.2
20 phlebotomus fever 10.2 GTF2H2 GTF2H1
21 hair disease 10.2 H2AC18 ERCC6 ERCC3
22 hutchinson-gilford progeria syndrome 10.2 XPA H2AC18 ERCC6 ERCC1
23 leukemia, chronic myeloid 10.2
24 skin benign neoplasm 10.2
25 pulmonary hypertension, primary, 1 10.1
26 ataxia-telangiectasia 10.1
27 ataxia and polyneuropathy, adult-onset 10.1
28 lung cancer susceptibility 1 10.1
29 leukemia 10.1
30 telangiectasis 10.1
31 hepatitis b 10.1
32 premature aging 10.1
33 overgrowth syndrome 10.1
34 cerebrooculofacioskeletal syndrome 1 10.0 ERCC6 ERCC5 ERCC2 ERCC1
35 ocular cancer 10.0 XPA H2AC18 ERCC2
36 robinow syndrome, autosomal recessive 1 10.0 XPA H2AC18 GTF2H5 ERCC6 DDB2
37 fanconi anemia, complementation group d2 10.0
38 xeroderma pigmentosum, complementation group e 10.0 XPA ERCC5 DDB2 DDB1
39 acoustic neuroma 9.9 ERCC5 ERCC4 ERCC2
40 female breast cancer 9.9 ERCC5 ERCC4 ERCC2
41 autosomal genetic disease 9.7 XPA RAD23B H2AC18 ERCC6 ERCC2 ERCC1
42 cerebro-oculo-facio-skeletal syndrome 9.7 ERCC6 ERCC5 ERCC4 ERCC3 ERCC2 ERCC1
43 xfe progeroid syndrome 9.7 XPA GTF2H5 ERCC6 ERCC5 ERCC4 ERCC3
44 breast disease 9.7 RAD23B H2AC18 ERCC5 ERCC4 ERCC2
45 fanconi anemia, complementation group a 9.5 XPA H2AC18 ERCC6 ERCC4 ERCC2 ERCC1
46 cockayne syndrome a 9.5 ERCC6 ERCC5 ERCC4 ERCC3 ERCC2 ERCC1
47 microcephaly 9.3 PUF60 ERCC6 ERCC5 ERCC4 ERCC2 ERCC1
48 xeroderma pigmentosum group e 8.5 XPA RAD23B H2AC18 GTF2H5 ERCC6 ERCC5
49 uv-sensitive syndrome 8.5 XPA RAD23B H2AC18 GTF2H5 ERCC6 ERCC5
50 xeroderma pigmentosum, complementation group d 7.4 XPA RAD23B H2AC18 GTF2H5 GTF2H4 GTF2H3

Graphical network of the top 20 diseases related to Xeroderma Pigmentosum, Complementation Group B:



Diseases related to Xeroderma Pigmentosum, Complementation Group B

Symptoms & Phenotypes for Xeroderma Pigmentosum, Complementation Group B

Human phenotypes related to Xeroderma Pigmentosum, Complementation Group B:

31 (show all 24)
# Description HPO Frequency HPO Source Accession
1 intellectual disability 31 HP:0001249
2 hyperreflexia 31 HP:0001347
3 ataxia 31 HP:0001251
4 cataract 31 HP:0000518
5 short stature 31 HP:0004322
6 microcephaly 31 HP:0000252
7 sensorineural hearing impairment 31 HP:0000407
8 optic atrophy 31 HP:0000648
9 cutaneous photosensitivity 31 HP:0000992
10 decreased nerve conduction velocity 31 HP:0000762
11 ventriculomegaly 31 HP:0002119
12 hypogonadism 31 HP:0000135
13 microphthalmia 31 HP:0000568
14 freckling 31 HP:0001480
15 cerebellar atrophy 31 HP:0001272
16 basal cell carcinoma 31 HP:0002671
17 squamous cell carcinoma of the skin 31 HP:0006739
18 cutaneous melanoma 31 HP:0012056
19 pigmentary retinopathy 31 HP:0000580
20 dermal atrophy 31 HP:0004334
21 progeroid facial appearance 31 HP:0005328
22 basal ganglia calcification 31 HP:0002135
23 abnormal cns myelination 31 HP:0011400
24 increased cellular sensitivity to uv light 31 HP:0003224

Symptoms via clinical synopsis from OMIM:

56
Neurologic Peripheral Nervous System:
hyperreflexia
decreased nerve conduction velocity

Growth Height:
short stature

Head And Neck Eyes:
optic atrophy
microphthalmia
pigmentary retinopathy
cataracts

Endocrine Features:
hypogonadism

Laboratory Abnormalities:
increased cellular sensitivity to uv light
decreased dna excision repair

Head And Neck Face:
wizened face

Neurologic Central Nervous System:
ataxia
cerebellar atrophy
abnormal myelination
mental retardation
basal ganglia calcifications
more
Head And Neck Head:
microcephaly

Neoplasia:
melanoma
basal cell carcinoma
squamous cell carcinoma
increased risk of malignancy

Skin Nails Hair Skin:
freckling
atrophic skin
photosensitivity
abnormal pigmentation

Head And Neck Ears:
sensorineural deafness

Growth Weight:
cachectic appearance

Clinical features from OMIM:

610651

UMLS symptoms related to Xeroderma Pigmentosum, Complementation Group B:


ataxia

GenomeRNAi Phenotypes related to Xeroderma Pigmentosum, Complementation Group B according to GeneCards Suite gene sharing:

26
# Description GenomeRNAi Source Accession Score Top Affiliating Genes
1 Decreased viability GR00106-A-0 10.33 PUF60
2 Decreased viability GR00221-A-2 10.33 CDK7 GTF2H1
3 Decreased viability GR00221-A-4 10.33 CDK7 GTF2H1
4 Decreased viability GR00301-A 10.33 CDK7
5 Decreased viability GR00381-A-1 10.33 DDB1 ERCC1 GTF2H2 GTF2H4
6 Decreased viability GR00402-S-2 10.33 CCNH CDK7 CETN2 DDB1 DDB2 ERCC1
7 Increased viability with MLN4924 (a NAE inhibitor) GR00250-A-3 9.91 CCNH CDK7 CETN2 DDB1 DDB2 ERCC1
8 no effect GR00402-S-1 9.62 CCNH CDK7 CETN2 DDB1 DDB2 ERCC1

MGI Mouse Phenotypes related to Xeroderma Pigmentosum, Complementation Group B:

45
# Description MGI Source Accession Score Top Affiliating Genes
1 cellular MP:0005384 10 CDK7 CETN2 DDB1 DDB2 ERCC1 ERCC2
2 integument MP:0010771 9.81 CDK7 DDB2 ERCC1 ERCC2 ERCC3 ERCC5
3 mortality/aging MP:0010768 9.8 CDK7 CETN2 DDB1 DDB2 ERCC1 ERCC2
4 neoplasm MP:0002006 9.1 DDB2 ERCC1 ERCC2 ERCC3 ERCC6 XPA

Drugs & Therapeutics for Xeroderma Pigmentosum, Complementation Group B

Search Clinical Trials , NIH Clinical Center for Xeroderma Pigmentosum, Complementation Group B

Genetic Tests for Xeroderma Pigmentosum, Complementation Group B

Genetic tests related to Xeroderma Pigmentosum, Complementation Group B:

# Genetic test Affiliating Genes
1 Xeroderma Pigmentosum, Complementation Group B 29 ERCC3

Anatomical Context for Xeroderma Pigmentosum, Complementation Group B

MalaCards organs/tissues related to Xeroderma Pigmentosum, Complementation Group B:

40
Skin, Lung, Breast, Myeloid

Publications for Xeroderma Pigmentosum, Complementation Group B

Articles related to Xeroderma Pigmentosum, Complementation Group B:

(show all 40)
# Title Authors PMID Year
1
A 3' --> 5' XPB helicase defect in repair/transcription factor TFIIH of xeroderma pigmentosum group B affects both DNA repair and transcription. 61 56 6
8663148 1996
2
Phenotypic heterogeneity in the XPB DNA helicase gene (ERCC3): xeroderma pigmentosum without and with Cockayne syndrome. 56 6
16947863 2006
3
Clinical heterogeneity within xeroderma pigmentosum associated with mutations in the DNA repair and transcription gene ERCC3. 56 6
8304337 1994
4
Xeroderma pigmentosum-Cockayne syndrome complex in two patients: absence of skin tumors despite severe deficiency of DNA excision repair. 56 6
8408834 1993
5
A presumed DNA helicase encoded by ERCC-3 is involved in the human repair disorders xeroderma pigmentosum and Cockayne's syndrome. 56 6
2167179 1990
6
Xeroderma pigmentosum. An inherited diseases with sun sensitivity, multiple cutaneous neoplasms, and abnormal DNA repair. 56 6
4811796 1974
7
Xeroderma Pigmentosum 6
20301571 2003
8
DNA repair. Seven genes for three diseases. 56
2005975 1991
9
Do we know the cause of xeroderma pigmentosum? 56
2189596 1990
10
Three complementation groups in Cockayne syndrome. 56
6185841 1982
11
Analysis of the conserved NER helicases (XPB and XPD) and UV-induced DNA damage in Hydra. 61
29959982 2018
12
Spironolactone-induced degradation of the TFIIH core complex XPB subunit suppresses NF-κB and AP-1 signalling. 61
29036418 2018
13
Nucleotide excision repair is a potential therapeutic target in multiple myeloma. 61
28588253 2018
14
Genetic Polymorphisms in XRCC1, CD3EAP, PPP1R13L, XPB, XPC, and XPF and the Risk of Chronic Benzene Poisoning in a Chinese Occupational Population. 61
26681190 2015
15
Loss of the xeroderma pigmentosum group B protein binding site impairs p210 BCR/ABL1 leukemogenic activity. 61
23955590 2013
16
Conserved XPB core structure and motifs for DNA unwinding: implications for pathway selection of transcription or excision repair. 61
16600867 2006
17
TFIIH operates through an expanded proximal promoter to fine-tune c-myc expression. 61
15601838 2005
18
Functional XPB/RAD25 redundancy in Arabidopsis genome: characterization of AtXPB2 and expression analysis. 61
15656976 2005
19
Phosphorylation of XPB helicase regulates TFIIH nucleotide excision repair activity. 61
15549133 2004
20
p210 BCR/ABL kinase regulates nucleotide excision repair (NER) and resistance to UV radiation. 61
12829601 2003
21
Impact of p210(Bcr-Abl) on ultraviolet C wavelength-induced DNA damage and repair. 61
14506164 2003
22
[Effect of benzo[a]pyrene on DNA damage and expression of genes involved in nucleotide excision repair in lung cancer cells]. 61
14694596 2002
23
TFIIH action in transcription initiation and promoter escape requires distinct regions of downstream promoter DNA. 61
11331764 2001
24
Increased mRNA levels of xeroderma pigmentosum complementation group B (XPB) and Cockayne's syndrome complementation group B (CSB) without increased mRNA levels of multidrug-resistance gene (MDR1) or metallothionein-II (MT-II) in platinum-resistant human ovarian cancer tissues. 61
11077043 2000
25
Mechanism of promoter melting by the xeroderma pigmentosum complementation group B helicase of transcription factor IIH revealed by protein-DNA photo-cross-linking. 61
11027286 2000
26
BCR binds to the xeroderma pigmentosum group B protein. 61
10403766 1999
27
The BCR-ABL oncoprotein potentially interacts with the xeroderma pigmentosum group B protein. 61
9874796 1999
28
Rapid changes of nucleotide excision repair gene expression following UV-irradiation and cisplatin treatment of Dictyostelium discoideum. 61
9649625 1998
29
p53-null cells are more sensitive to ultraviolet light only in the presence of caffeine. 61
8968086 1996
30
[The dual function of the proliferating cell nuclear antigen (PCNA) in the response of human cells to UV damages]. 61
9163104 1996
31
The xeroderma pigmentosum group B protein ERCC3 produced in the baculovirus system exhibits DNA helicase activity. 61
7937133 1994
32
Mutational analysis of ERCC3, which is involved in DNA repair and transcription initiation: identification of domains essential for the DNA repair function. 61
8196650 1994
33
Correction of xeroderma pigmentosum repair defect by basal transcription factor BTF2 (TFIIH). 61
8157004 1994
34
The COOH terminus of suppressor of stem loop (SSL2/RAD25) in yeast is essential for overall genomic excision repair and transcription-coupled repair. 61
8294433 1994
35
RAD25 (SSL2), the yeast homolog of the human xeroderma pigmentosum group B DNA repair gene, is essential for viability. 61
1333609 1992
36
Cloning and characterization of the Drosophila homolog of the xeroderma pigmentosum complementation-group B correcting gene, ERCC3. 61
1454518 1992
37
Requirement for ERCC-1 and ERCC-3 gene products in DNA excision repair in vitro. Complementation using rodent and human cell extracts. 61
1551896 1992
38
Molecular and functional analysis of the XPBC/ERCC-3 promoter: transcription activity is dependent on the integrity of an Sp1-binding site. 61
1741247 1992
39
Structure and expression of the human XPBC/ERCC-3 gene involved in DNA repair disorders xeroderma pigmentosum and Cockayne's syndrome. 61
1956789 1991
40
Localization of the xeroderma pigmentosum group B-correcting gene ERCC3 to human chromosome 2q21. 61
1916809 1991

Variations for Xeroderma Pigmentosum, Complementation Group B

ClinVar genetic disease variations for Xeroderma Pigmentosum, Complementation Group B:

6 (show all 20) ‎‎ ‎‎ ‎‎ ‎‎ ‎‎ ‎‎ ‎‎ ‎‎ ‎‎ ‎‎ ‎‎ ‎‎ ‎‎ ‎‎ ‎‎ ‎‎ ‎‎ ‎‎ ‎‎ ‎‎
# Gene Name Type Significance ClinVarId dbSNP ID GRCh37 Pos GRCh38 Pos
1 ERCC3 ERCC3, IVS14AS, C-A, -6SNV Pathogenic 16582
2 ERCC3 NM_000122.1(ERCC3):c.296T>C (p.Phe99Ser)SNV Pathogenic 16583 rs121913045 2:128050361-128050361 2:127292785-127292785
3 ERCC3 NM_000122.1(ERCC3):c.1273C>T (p.Arg425Ter)SNV Pathogenic 16585 rs121913047 2:128044348-128044348 2:127286772-127286772
4 ERCC3 NM_000122.1(ERCC3):c.809_810del (p.Ser269_Phe270insTer)deletion Pathogenic 16586 rs866379139 2:128046925-128046926 2:127289349-127289350
5 ERCC3 NM_000122.1(ERCC3):c.1633C>T (p.Gln545Ter)SNV Pathogenic 16588 rs121913048 2:128036846-128036846 2:127279270-127279270
6 ERCC3 NM_000122.1(ERCC3):c.471+1G>ASNV Pathogenic 16589 rs1558964705 2:128050185-128050185 2:127292609-127292609
7 ERCC3 NM_000122.1(ERCC3):c.583C>T (p.Arg195Ter)SNV Pathogenic 627443 rs138385061 2:128047339-128047339 2:127289763-127289763
8 ERCC3 NM_000122.1(ERCC3):c.1421dup (p.Asp474fs)duplication Pathogenic 134130 rs587778281 2:128038128-128038129 2:127280552-127280553
9 ERCC3 NM_000122.2(ERCC3):c.460C>T (p.Gln154Ter)SNV Pathogenic 801749 2:128050197-128050197 2:127292621-127292621
10 ERCC3 NM_000122.1(ERCC3):c.325C>T (p.Arg109Ter)SNV Pathogenic/Likely pathogenic 265515 rs34295337 2:128050332-128050332 2:127292756-127292756
11 ERCC3 NM_000122.2(ERCC3):c.1933C>T (p.Arg645Ter)SNV Likely pathogenic 801744 2:128028924-128028924 2:127271348-127271348
12 ERCC3 NM_000122.1(ERCC3):c.2111C>T (p.Ser704Leu)SNV Conflicting interpretations of pathogenicity 134120 rs4150521 2:128016978-128016978 2:127259402-127259402
13 ERCC3 NM_000122.1(ERCC3):c.847C>T (p.Arg283Cys)SNV Uncertain significance 134128 rs145201970 2:128046416-128046416 2:127288840-127288840
14 ERCC3 NM_000122.1(ERCC3):c.1887dup (p.Gly630fs)duplication Uncertain significance 632329 rs1558952235 2:128028969-128028970 2:127271393-127271394
15 ERCC3 NM_000122.1(ERCC3):c.1757_1758del (p.Gln586fs)deletion Uncertain significance 632330 rs774261851 2:128030510-128030511 2:127272934-127272935
16 ERCC3 NM_000122.1(ERCC3):c.794_795CA[1] (p.Gln266fs)short repeat Uncertain significance 631826 rs1558962530 2:128046938-128046939 2:127289362-127289363
17 ERCC3 NM_000122.2(ERCC3):c.1828-32A>TSNV Benign 801745 2:128029061-128029061 2:127271485-127271485
18 ERCC3 NM_000122.2(ERCC3):c.1828-33C>TSNV Benign 801746 2:128029062-128029062 2:127271486-127271486
19 ERCC3 NM_000122.2(ERCC3):c.1828-35C>TSNV Benign 801747 2:128029064-128029064 2:127271488-127271488
20 ERCC3 NM_000122.2(ERCC3):c.1828-36C>TSNV Benign 801748 2:128029065-128029065 2:127271489-127271489

UniProtKB/Swiss-Prot genetic disease variations for Xeroderma Pigmentosum, Complementation Group B:

73
# Symbol AA change Variation ID SNP ID
1 ERCC3 p.Phe99Ser VAR_003632 rs121913045

Expression for Xeroderma Pigmentosum, Complementation Group B

Search GEO for disease gene expression data for Xeroderma Pigmentosum, Complementation Group B.

Pathways for Xeroderma Pigmentosum, Complementation Group B

Pathways related to Xeroderma Pigmentosum, Complementation Group B according to GeneCards Suite gene sharing:

(show all 15)
# Super pathways Score Top Affiliating Genes
1
Show member pathways
13.76 PUF60 H2AC18 GTF2H5 GTF2H4 GTF2H3 GTF2H2
2
Show member pathways
13.69 H2AC18 GTF2H5 GTF2H4 GTF2H3 GTF2H2 GTF2H1
3
Show member pathways
13.57 GTF2H5 GTF2H4 GTF2H3 GTF2H2 GTF2H1 ERCC3
4
Show member pathways
13.27 GTF2H5 GTF2H4 GTF2H3 GTF2H2 GTF2H1 ERCC3
5
Show member pathways
12.99 GTF2H5 GTF2H4 GTF2H3 GTF2H2 GTF2H1 ERCC3
6
Show member pathways
12.97 GTF2H5 GTF2H4 GTF2H3 GTF2H2 GTF2H1 ERCC3
7
Show member pathways
12.84 XPA RAD23B GTF2H5 GTF2H4 GTF2H3 GTF2H2
8
Show member pathways
12.67 XPA RAD23B GTF2H3 GTF2H2 GTF2H1 ERCC6
9
Show member pathways
12.58 XPA RAD23B GTF2H5 GTF2H4 GTF2H3 GTF2H2
10 12.54 XPA RAD23B ERCC4 ERCC3 ERCC2 ERCC1
11 12.23 GTF2H4 GTF2H3 GTF2H2 GTF2H1 DDB1
12
Show member pathways
12 GTF2H5 GTF2H4 GTF2H3 GTF2H2 GTF2H1 ERCC6
13
Show member pathways
11.97 XPA RAD23B GTF2H5 GTF2H4 GTF2H3 GTF2H2
14 11.77 XPA GTF2H5 GTF2H4 GTF2H3 GTF2H2 GTF2H1
15 11.34 XPA ERCC6 ERCC4 ERCC3 ERCC2 ERCC1

GO Terms for Xeroderma Pigmentosum, Complementation Group B

Cellular components related to Xeroderma Pigmentosum, Complementation Group B according to GeneCards Suite gene sharing:

(show all 16)
# Name GO ID Score Top Affiliating Genes
1 nucleus GO:0005634 10.32 XPA RAD23B PUF60 H2AC18 GTF2H5 GTF2H4
2 nucleoplasm GO:0005654 10.23 XPA RAD23B PUF60 GTF2H5 GTF2H4 GTF2H3
3 nuclear chromosome, telomeric region GO:0000784 9.73 ERCC4 ERCC1 DDB1
4 transcription factor TFIIH core complex GO:0000439 9.7 GTF2H5 GTF2H4 GTF2H3 GTF2H2 GTF2H1 ERCC3
5 nucleotide-excision repair complex GO:0000109 9.61 ERCC5 ERCC4 ERCC1
6 core TFIIH complex portion of holo TFIIH complex GO:0000438 9.58 GTF2H4 GTF2H3 GTF2H2
7 transcription factor TFIID complex GO:0005669 9.56 GTF2H5 GTF2H4 GTF2H3 GTF2H2 ERCC4 ERCC3
8 DNA replication factor A complex GO:0005662 9.55 XPA ERCC5
9 transcriptional preinitiation complex GO:0097550 9.54 GTF2H3 ERCC3
10 nucleotide-excision repair factor 1 complex GO:0000110 9.54 XPA ERCC4 ERCC1
11 Cul4B-RING E3 ubiquitin ligase complex GO:0031465 9.52 DDB2 DDB1
12 ERCC4-ERCC1 complex GO:0070522 9.51 ERCC4 ERCC1
13 XPC complex GO:0071942 9.49 RAD23B CETN2
14 cyclin-dependent protein kinase activating kinase holoenzyme complex GO:0019907 9.48 CDK7 CCNH
15 transcription factor TFIIK complex GO:0070985 9.46 CDK7 CCNH
16 transcription factor TFIIH holo complex GO:0005675 9.28 GTF2H5 GTF2H4 GTF2H3 GTF2H2 GTF2H1 ERCC3

Biological processes related to Xeroderma Pigmentosum, Complementation Group B according to GeneCards Suite gene sharing:

(show all 39)
# Name GO ID Score Top Affiliating Genes
1 nucleotide-excision repair, DNA incision GO:0033683 10.29 XPA GTF2H5 GTF2H4 GTF2H3 GTF2H2 GTF2H1
2 transcription by RNA polymerase II GO:0006366 10.28 GTF2H5 GTF2H4 GTF2H3 GTF2H2 GTF2H1 ERCC6
3 nucleotide-excision repair, DNA duplex unwinding GO:0000717 10.27 XPA RAD23B GTF2H5 GTF2H4 GTF2H3 GTF2H2
4 nucleotide-excision repair, DNA incision, 5'-to lesion GO:0006296 10.27 XPA GTF2H5 GTF2H4 GTF2H3 GTF2H2 GTF2H1
5 nucleotide-excision repair, DNA incision, 3'-to lesion GO:0006295 10.25 XPA GTF2H5 GTF2H4 GTF2H3 GTF2H2 GTF2H1
6 transcription initiation from RNA polymerase II promoter GO:0006367 10.24 GTF2H5 GTF2H4 GTF2H3 GTF2H2 GTF2H1 ERCC3
7 nucleotide-excision repair, preincision complex stabilization GO:0006293 10.22 XPA GTF2H5 GTF2H4 GTF2H3 GTF2H2 GTF2H1
8 7-methylguanosine mRNA capping GO:0006370 10.21 GTF2H5 GTF2H4 GTF2H3 GTF2H2 GTF2H1 ERCC3
9 transcription elongation from RNA polymerase I promoter GO:0006362 10.21 GTF2H5 GTF2H4 GTF2H3 GTF2H2 GTF2H1 ERCC6
10 global genome nucleotide-excision repair GO:0070911 10.21 XPA RAD23B GTF2H5 GTF2H4 GTF2H3 GTF2H2
11 transcription elongation from RNA polymerase II promoter GO:0006368 10.2 GTF2H5 GTF2H4 GTF2H3 GTF2H2 GTF2H1 ERCC3
12 nucleotide-excision repair, preincision complex assembly GO:0006294 10.2 XPA RAD23B GTF2H5 GTF2H4 GTF2H3 GTF2H2
13 termination of RNA polymerase I transcription GO:0006363 10.19 GTF2H5 GTF2H4 GTF2H3 GTF2H2 GTF2H1 ERCC3
14 transcription initiation from RNA polymerase I promoter GO:0006361 10.18 GTF2H5 GTF2H4 GTF2H3 GTF2H2 GTF2H1 ERCC3
15 response to UV GO:0009411 10.17 XPA GTF2H2 ERCC6 ERCC5 ERCC4 ERCC3
16 nucleotide-excision repair GO:0006289 10.13 XPA RAD23B GTF2H5 GTF2H4 GTF2H3 GTF2H2
17 protein phosphorylation GO:0006468 10.07 GTF2H2 ERCC3 ERCC2 CDK7 CCNH
18 UV protection GO:0009650 10.05 XPA ERCC5 ERCC4 ERCC3 ERCC2 ERCC1
19 transcription-coupled nucleotide-excision repair GO:0006283 10.03 XPA GTF2H5 GTF2H4 GTF2H3 GTF2H2 GTF2H1
20 response to oxidative stress GO:0006979 10.02 XPA ERCC6 ERCC3 ERCC2 ERCC1
21 nucleotide-excision repair, DNA damage recognition GO:0000715 10 XPA RAD23B DDB2 DDB1 CETN2
22 phosphorylation of RNA polymerase II C-terminal domain GO:0070816 10 GTF2H5 GTF2H4 GTF2H3 GTF2H1 CCNH
23 multicellular organism growth GO:0035264 9.93 XPA ERCC6 ERCC2 ERCC1
24 embryonic organ development GO:0048568 9.92 RAD23B ERCC3 ERCC2 ERCC1
25 UV-damage excision repair GO:0070914 9.91 XPA ERCC1 DDB2 DDB1
26 cellular response to DNA damage stimulus GO:0006974 9.89 XPA RAD23B GTF2H5 GTF2H4 GTF2H3 GTF2H2
27 nucleic acid phosphodiester bond hydrolysis GO:0090305 9.85 ERCC5 ERCC4 ERCC1
28 regulation of mitotic cell cycle phase transition GO:1901990 9.84 ERCC3 ERCC2 DDB1
29 DNA duplex unwinding GO:0032508 9.84 ERCC6 ERCC3 ERCC2
30 regulation of cyclin-dependent protein serine/threonine kinase activity GO:0000079 9.83 GTF2H1 CDK7 CCNH
31 response to X-ray GO:0010165 9.68 ERCC6 ERCC1
32 histone H2A monoubiquitination GO:0035518 9.67 DDB2 DDB1
33 hair cell differentiation GO:0035315 9.65 ERCC3 ERCC2
34 pyrimidine dimer repair GO:0006290 9.65 ERCC6 DDB2
35 negative regulation of telomere maintenance GO:0032205 9.65 ERCC4 ERCC1
36 negative regulation of protection from non-homologous end joining at telomere GO:1905765 9.64 ERCC4 ERCC1
37 telomeric DNA-containing double minutes formation GO:0061819 9.64 ERCC4 ERCC1
38 nucleotide-excision repair involved in interstrand cross-link repair GO:1901255 9.63 XPA ERCC4
39 DNA repair GO:0006281 9.55 XPA RAD23B GTF2H5 GTF2H4 GTF2H3 GTF2H2

Molecular functions related to Xeroderma Pigmentosum, Complementation Group B according to GeneCards Suite gene sharing:

(show all 18)
# Name GO ID Score Top Affiliating Genes
1 protein binding GO:0005515 10.43 XPA RAD23B PUF60 GTF2H5 GTF2H4 GTF2H3
2 DNA binding GO:0003677 10.17 XPA PUF60 H2AC18 ERCC6 ERCC5 ERCC4
3 protein kinase activity GO:0004672 9.91 GTF2H4 GTF2H3 GTF2H2 GTF2H1 ERCC3 ERCC2
4 protein-containing complex binding GO:0044877 9.87 ERCC6 ERCC5 DDB2 DDB1
5 protein C-terminus binding GO:0008022 9.8 ERCC6 ERCC4 ERCC3 ERCC2 ERCC1 CDK7
6 protein N-terminus binding GO:0047485 9.8 GTF2H3 GTF2H2 ERCC6 ERCC5 ERCC4 ERCC3
7 single-stranded DNA binding GO:0003697 9.78 RAD23B ERCC5 ERCC4 ERCC1
8 damaged DNA binding GO:0003684 9.76 XPA RAD23B ERCC4 ERCC3 ERCC2 ERCC1
9 nuclease activity GO:0004518 9.75 ERCC5 ERCC4 ERCC1
10 endonuclease activity GO:0004519 9.72 ERCC5 ERCC4 ERCC1
11 DNA helicase activity GO:0003678 9.69 ERCC6 ERCC3 ERCC2
12 RNA polymerase II general transcription initiation factor activity GO:0016251 9.58 GTF2H4 GTF2H3 GTF2H2
13 endodeoxyribonuclease activity GO:0004520 9.56 ERCC5 ERCC4
14 RNA polymerase II CTD heptapeptide repeat kinase activity GO:0008353 9.56 GTF2H4 GTF2H3 GTF2H2 GTF2H1 ERCC3 ERCC2
15 TFIID-class transcription factor complex binding GO:0001094 9.54 ERCC4 ERCC1
16 single-stranded DNA endodeoxyribonuclease activity GO:0000014 9.52 ERCC4 ERCC1
17 3' overhang single-stranded DNA endodeoxyribonuclease activity GO:1990599 9.49 ERCC4 ERCC1
18 DNA-dependent ATPase activity GO:0008094 9.28 GTF2H4 GTF2H3 GTF2H2 GTF2H1 ERCC6 ERCC3

Sources for Xeroderma Pigmentosum, Complementation Group B

3 CDC
7 CNVD
9 Cosmic
10 dbSNP
11 DGIdb
17 EFO
18 ExPASy
19 FMA
28 GO
29 GTR
30 HMDB
31 HPO
32 ICD10
33 ICD10 via Orphanet
34 ICD9CM
35 IUPHAR
36 KEGG
37 LifeMap
39 LOVD
41 MedGen
43 MeSH
44 MESH via Orphanet
45 MGI
48 NCI
49 NCIt
50 NDF-RT
53 NINDS
54 Novoseek
56 OMIM
57 OMIM via Orphanet
61 PubMed
63 QIAGEN
68 SNOMED-CT via HPO
69 TGDB
70 Tocris
71 UMLS
72 UMLS via Orphanet
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